#NEXUS [!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file. Generated on May 02, 2024; 4:07 GMT TreeBASE (cc) 1994-2008 Study reference: Koike S., Baameur A., Groenewald J.Z., & Crous P.W. 2011. Cercosporoid leaf pathogens from whorled milkweed and spineless safflower in California. IMA Fungus, 2(1): 7-12. TreeBASE Study URI: http://purl.org/phylo/treebase/phylows/study/TB2:S11804] [ The following blocks are input data for analysis step 7716 ] BEGIN TAXA; TITLE TaxaForAnalysisStep7716; DIMENSIONS NTAX=34; TAXLABELS _Ramularia_lamii_var._lamii_EF53568 Cladosporium_bruhnei_EF679337 Dothistroma_pini_AF013227 Dothistroma_septosporum_GU256362 Mycosphaerella_africana_AY626981 Mycosphaerella_aurantia_EU851913 Mycosphaerella_buckinghamiae_EU707856 Mycosphaerella_laricina_EU167595 Passalora_ageratinae_GU214639 Passalora_arachidicola_EF157739 Passalora_bellynckii_AF222831 Passalora_brachycarpa_GU214664 Passalora_californica_CPC_18389 Passalora_californica_CPC_18391 Passalora_dissiliens_AF222835 Passalora_dodonaea_GU214641 Passalora_fulva_AF393701 Passalora_henningsii_AF284389 Passalora_sequoiae_GU214667 Passalora_sp._GU214668 Passalora_vaginae_AF222832 Pseudocercospora_opuntiae_GU214679 Pseudocercospora_rubi_AF362058 Pseudocercosporella_bakeri_GU570542 Ramularia_acroptili_GU214689 Ramularia_brunnea_GU214691 Ramularia_coleosporii_GU214692 Ramularia_cynarae_CPC_18426 Ramularia_cynarae_CPC_18725 Ramularia_endophylla_EU167569 Ramularia_eucalypti_EF394862 Ramularia_nagornyi_EU019257 Ramularia_proteae_EU707899 Ramularia_sp._GU214690 ; END; BEGIN CHARACTERS; [! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M9979] TITLE ITS_alignment; LINK TAXA = TaxaForAnalysisStep7716; DIMENSIONS NCHAR=1125; FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -; MATRIX [ 10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410 420 430 440 450 460 470 480 490 500 510 520 530 540 550 560 570 580 590 600 610 620 630 640 650 660 670 680 690 700 710 720 730 740 750 760 770 780 790 800 810 820 830 840 850 860 870 880 890 900 910 920 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 ] [ . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ] _Ramularia_lamii_var._lamii_EF53568 -----------------------------------------------------------------------------------------------------------------------------------AGGGATCATTACTGAGTGAGGGA---GCAATCCCG--AACCTCCAA-CCCTTTGTGAACGAATCTCGTTGCTTTGGGG----GCGACCCTGCCGTTCATTCGGCATTCCCCCCAGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAATTCTCCGGCTCGGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGCTCGGGTCGTG-GGGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Cladosporium_bruhnei_EF679337 ---------------------------------------------------------------------------------------------------------------------------------------ATCATTACAAGAACGCCCGGGCTTCGGCCTGGTTATTCATAA-CCCTTTGTTGTCCGACTCTGTTGCCTCCGGG----GCGACCCTGCC-TTCGGGCG--GGGGCTCCGGGTGGACACTTCAAACTCTTGCGTAACTTTGCAGTCTGAGT---AAACTT---AATTAATAAATTAAAACTTTTAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCAA-CGCG-GTCCGCCGCGTGCCTCAAATCGTCCGGCTGGGTCTTCTGTCCCCTAAGCGTTGTGGAAACTAT------TCGCTAAAGGGTGTTCGGGAGGCTAC--GCCGTAAAACAACCCCATTTC--TAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCTCTAGTAACGGCGAGTGAAGCAGCAATAGCTCAAATTTGAAATCTGGCGTCTTCGACGTCCGAGTTGTAATTTGTAGAGGATGCTTCTGAGTGGCCACCGACCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGCGGTCGGAAAGGCGCTCTATACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTAAAAGGGAAGGGATTGCAACCAGACTTGCTCGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCGCCGCGTTGCAGGCCAGC Dothistroma_pini_AF013227 -------------------------------------------------------------------------CTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCCGGTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GAAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCTGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTATGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTTTACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Dothistroma_septosporum_GU256362 ---------------------------------------------------------------------------------------GGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GAAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTT-ACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mycosphaerella_africana_AY626981 ------------------------------------------------------------------------------------AGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTC-TTAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Mycosphaerella_aurantia_EU851913 --------------------------------------------------------------------------------------------------------------TTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTC-TTAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Mycosphaerella_buckinghamiae_EU707856 ATGGCTCAGTGAGGCCTTCGGACTGGCCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTC-TTAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGC-GCAGCCTTTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTCGTAGCGATGTTCCGCTGGTCTTCTGACCGGTCTACTCATCGTCGCG-AGGCCAAC Mycosphaerella_laricina_EU167595 ATGGCTCAGTGAGGCCTTCGGACTGGCCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACCCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTA--TTCAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT-TTTCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGATTTTTTTCAAAATCGC--TGAAGAGTTCGGGCGGCG-ACGGCCGTTAAA------TCTTTATTCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGC-GCAGCCTTTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTCGTAGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCATCGTCGCG-AGGCCAAC Passalora_ageratinae_GU214639 ATGGCTCAGTGAGGCCTTCGGACTGGCCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GAAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--TAAAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATCATTG-----TCGC--TGAAGAGTTCGAACGGCTTTCGGCCGTTAAA------TCTTTC-ACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_arachidicola_EF157739 ACCCTCAACTTGGGCGGGCCGACAAGCTTCAAGTTGAGGTTACTGGAAGTAAAAGTCGTAACAAGGTCTCCGCCCCCTAACCAGCGGGGAAGTAACTATCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GCGAGCCCG---ACCTCCAA-CCCTTTGTGCACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTCTGGGCGACGGCGCCCCCGGAGGTCG-TCAAAACACT---GCATCTCTGC-GTCGGAGTCGTCAAGTA---AATT--G-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTCCGT-CTCTAAGCGTTGTGGCACATATT-----TCGC--TGCAGAGTCCGGGCGGCTTTCGGCCGTTAAA------TCTTTC-TCAAGG-TGACCTCGGATCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_bellynckii_AF222831 ---------------------------------------------------------------------------------------------------------------TC--GAAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTGAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTAAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGGCGGCTTTTGGCCGTTAAA------TCTTTC-TTAAGGTTGACCTCGGATCAGGTAGGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_brachycarpa_GU214664 ATGGCTCAGTGAGGCCTTCGGACTGGCCCAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTGAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGTCCGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGACATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTC-TCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGC-GCAGCCTTTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTCGTAGCGATGTTCCGCTGGTCTTCTGACCGGTCTACTCATCGTCGCG-AGGCCAAC Passalora_californica_CPC_18389 ATGGCTCAGTGAGGCCTTCGGACTGGCCCAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCGACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-TCCAAACACT---GCATCTCTGC-GTCGGAGTCTTGAAGTA---AATC--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGGCGGCTTTTGGCCGTTAAA------TCTTTC-TCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_californica_CPC_18391 ATGGCTCAGTGAGGCCTTCGGACTGGCCCAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCGACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-TCCAAACACT---GCATCTCTGC-GTCGGAGTCTTGAAGTA---AATC--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCCAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGGCGGCTTTTGGCCGTTAAA------TCTTTC-TCAAGGTTGACCTCGGATCAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_dissiliens_AF222835 ---------------------------------------------------------------------------------------------------------------TCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTGAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTAAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGGCGGCTTTTGGCCGTTAAA------TCTTTC-TTAAGGTTGACCTCGGATCCCGTAG-CATAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_dodonaea_GU214641 -----------------------------------------------------GGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGAGAGGGC---GCAAGCCCG---ACCTCCAACCCCTTTGTGAACCAACTCGGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACC---GCATCTCTGC-GTCGGAGTCATAAAGTAGTAAATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCAAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTAAGCAGTTCGT-CTCCAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTCTGGACGGCTTTTGGCCGTTAAA------TCTTTT-ACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCTTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Passalora_fulva_AF393701 ----------------TTCGGACTTGGCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCACTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTCTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGATCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTGAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TAAAGAGTTCGGGCGGCTTTTGGCCGTTAAA------TCTTTT-CAAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Passalora_henningsii_AF284389 ------------------------------------------------------------------------------------------------------------GTTTCC-GTAGGTGAACCTGCGGAGGGATCATT-CTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTGAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATCTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATATCTT-----TCGC--TGAAGAGTTCGG-CGGCTTTTGGCCGTTAAA------TCTTTC-TCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Passalora_sequoiae_GU214667 ATGGCTCAGTGAGGCCTTCGGACTGGCCCAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GCAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGGAA-T-CGAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGTGTCGCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGATTTTCATTAAA--TCGC--TGAAGAGTTCGGGCGGCG-ACGGCCGTTAAA------TCTTTTAACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGC-GCAGCCTTTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTCGTAGCGATGTTCCGCCGGTCAAAAGACCGGTCTACTCATCGTCGCG-AGGCCAAC Passalora_sp._GU214668 ATGGCTCAGTGAGGCCTTCGGACTGGCCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GCAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTGTGGTATTCCGCAGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGTTCGT-CTCTAAGCGTTGTGGCATCATTG-----TCGC--TGAAGAGTGCGGACGGCTTTCGGCCGTTAAA------TCTTTT-ACAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGC-GCAGCCTTTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTCGTAGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCATCGTCGCG-AGGCCAAC Passalora_vaginae_AF222832 ---------------------------------------------------------------------------------------------------------------TCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---TCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTGAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTGGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTAAGCAGTTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGGCGGCTTTTGGCCGTTAAA------TCTTTC-TTAAGGTTGACCTCGGATCAGGTAGGAATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pseudocercospora_opuntiae_GU214679 ATGGCTCAGTGAGGCCTTTGGACTGGCCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GAAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCG-T-CAAACACT---GCATCTCTGC-GTCGGAGTCTTAAAGTA---AATT--T-GAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCATTCAAGCCTAGCTTGGTATTGGGCGT-CGTGGT---TCCGCGCGCCTTAAAGTCTCCGGCTAAGCAGTTCGT-CTCTAAGCGTTGTGGCATACATTTT---TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTCT--TAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTGGCCAGCGGCCGTTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCGC-GCAGCCTTTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTCGCAGCGATGTTCCGCTGGTCTTCTGACCGGTCTACTCATCGTCGCG-AGGCCAAC Pseudocercospora_rubi_AF362058 ---------------------------------------------------------------------------------------------------------------TCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GCAAGCCCG---ACCTCCAA-CCCTTTGTGAACCAACTCTGTTGCTTCGGGG----GCGACCCCGCCGTTTCGGCGACGGCGCCCCCGGAGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTAAAGTA---AATT--T-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCTCCGGCTGAGCAGCTCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--TGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTC-TCAAGGTTGACCTCGGATCAGGTAGGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pseudocercosporella_bakeri_GU570542 ATGGCTCAGTGAGGCCTTCGGACTGGCCTAGGGAGGTCGGCAACGACCACCCAGGGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC---GCACGCCCG---ACCTCCAA-CCCTTTGTGAACCAACCCTGTTGCTTCGGGGGCGAGCGACCCCTTCGTTTCGGCGACGGCGCCCCCGGGGGTCA-T-CAAACACT---GCATCTTTGC-GTCGGAGTCTTGAAGTA---AATT--C-AAACAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCGTGGTATTCCGCGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTAGCTTGGTATTGGGCGT-CGCGGT---TCCGCGCGCCTTAAAGTCCCCGGCTGAGCAGTCCGT-CTCTAAGCGTTGTGGCATATATT-----TCGC--CGAAGAGTTCGGACGGCTTTTGGCCGTTAAA------TCTTTC-TCAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Ramularia_acroptili_GU214689 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACCGAGTGAGGGA---GCAATCCCG--AACCTCCAA-CCCTTTGTGAACCCATCTCGTTGCTTCGGGG----GCGACCCTGCCGTTCGCGCGGCATTCCCCCCGGAGGTCA-TCCAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATG--G--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGC-CGCGAGTCCCTCGCGCGCCTCAAAGTCTCCGGCTCGGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGGGGCGTC-GGGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCGCCGTCCCG-AGGCCAAC Ramularia_brunnea_GU214691 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTTAGGGA---GCAATCCCG---ACCTCCAA-CCCTTTGTGAACACATCTTGTTGCTTCGGGG----GCGACCCTGCCGTTTCGACGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTAGGCGGTTCGT-CTCCCAGCGTTGTGGCAACTAT------TCGC--AGAGGAGTTCGAGTCGTC-GCGGCCGTTAA-------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCACCGTCCCG-AGGCCAAC Ramularia_coleosporii_GU214692 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTTAGGGA---GCAATCCCG---ACCTCCAA-CCCTTTGTGAACACATCTCGTTGCTTTGGGG----GCGACCCTGCCGTTC--GCGGCACTCCCCCCGGAGATCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-AAAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTGAGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGAGTCGTC-GCGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTTTGACCGGTCTACTCGCCGTCCCG-AGGCCAAC Ramularia_cynarae_CPC_18426 --------------------GACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTTAGGGA---GCAATCCCG--AACCTCCAA-CCCTTTGTGAACGAATCTCGTTGCTTCGGGG----GCGACCCTGCCGTTCATTCGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTCGGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGGGTCGTCTGTGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Ramularia_cynarae_CPC_18725 -------------------------------------------------------------------------------------------------------------------------------------GGATCATTACTGAGTTAGGGA---GCAATCCCG--AACCTCCAA-CCCTTTGTGAACGAATCTCGTTGCTTCGGGG----GCGACCCTGCCGTTCATTCGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTCGGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGGGTCGTCTGTGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCGCCGTCCCG-AGGCCAAC Ramularia_endophylla_EU167569 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGC--TTCCGGCCCG---ACCTCCAA-CCCTTTGTGAACACATCTTGTTGCTTCGGGG----GCGACCCTGCCGTTC--GCGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-AAAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTGTGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGAGTCGTC-GTGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACTGGCCC-GCACCTTCTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCTAGGCAGTGTTCCGCCGGTCTTTTGACCGGTCTACTCTCTGTCTCG-AGGCCAAC Ramularia_eucalypti_EF394862 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGA---GAAATCCCG---ACCTCCAA-CCCTTTGTGAACGCATCATGTTGCTTTGGGG----GCGACCCTGCCGTTTC-GCGGCATTCCCCCCGAAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTGAGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGAGTCGTC-GCGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Ramularia_nagornyi_EU019257 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACCGAGTGAGGGA---GCAATCCCG--AACCTCCAA-CCCTTTGTGGACCCATCTCGTTGCTTCGGGG----GCGACCCTGCCGTTCGCGCGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--G--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGC-CGCGAGTCCCTCGCGCGCCTCAAAGTCTCCGGCTCGGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGGGGCGTC-GGGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCCACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTCACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTCTGACCGGTCTACTCGCCGTCCCG-AGGCCAAC Ramularia_proteae_EU707899 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGA---GCAATCCCG---ACCTCCAA-CCCTTTGTGAACACATCTTGTTGCTTCGGGG----GCGACCCTGCCGTTTCGACGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-ATAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGT-CGCGAGTCTCTCGCGCGCCTCAAAGTCTCCGGCTGAACGGTTCGT-CTCCCAGCGTTGTGACAA--ATT-----TCGC--AGTGGAGTTCGAGTCGTC-GCGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCTACGTAGCTCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTTTGACCGGTCTACTCTCCGTCCCG-AGGCCAAC Ramularia_sp._GU214690 ATGGCTCAGTGAGGCCTTCGGACTGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTGGTCAAACTCGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTCTCC-GTAGGTGAACCTGCGGAGGGATCATTACTGAGTGAGGGA---GCAATCCCG---ACCTCCAA-CCCTTTGTGAACACATCTCGTTGCTTCGGGG----GCGACCCTGCCGTTC--GCGGCATTCCCCCCGGAGGTCA-TCAAAACACT---GCATTCTTAC-GTCGGAGT-AAAAAGTT---AATT--T--AATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTTCACCACTCAAGCCTCGCTTGGTATTGGGCGC-CGCGAGTCCCTCGCGCGCCTCAAAGTCTCCGGCTGAGCGGTTCGT-CTCCCAGCGTTGTGGCAACTATT-----TCGC--AGTGGAGTTCGAGTCGTC-GCGGCCGTTAAA------TCTTTC--AAAGGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAAAGAAACCAACAGGGATTGCCCTAGTAACGGCGAGTGAAGCGGCAACAGCTCAAATTTGAAATCTGGCGC-----AAGCCCGAGTTGTAATTTGTAGAGGATGCTTCTAGGTAGCGACCGGTCTAAGTTCCTTGGAACAGGACGTCATAGAGGGTGAGAATCCCGTATGTGACCGGCCC-GCACCTTCTACGTAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTACAACCAGACTTCTGGGCGGTGTTCCGCCGGTCTTTTGACCGGTCTACTCGCCGTCCCG-AGGCCAAC ; END; BEGIN SETS; CHARSET ITS (CHARACTERS = ITS_alignment) = 136-644; END; BEGIN CODONS; CODONPOSSET * CodonPositions (CHARACTERS = ITS_alignment) = N: 1-1125; CODONPOSSET CodonPositions (CHARACTERS = ITS_alignment) = N: 1-1125; END; [ The following blocks are output data for analysis step 7716 ] BEGIN TREES; TITLE The_first_of_1000_MPTs; LINK TAXA = TaxaForAnalysisStep7716; TREE Fig._1 = [&R] (Cladosporium_bruhnei_EF679337,((((Ramularia_eucalypti_EF394862,(Ramularia_proteae_EU707899,Ramularia_brunnea_GU214691)),(((_Ramularia_lamii_var._lamii_EF53568,(Ramularia_cynarae_CPC_18426,Ramularia_cynarae_CPC_18725)),(Ramularia_nagornyi_EU019257,Ramularia_acroptili_GU214689)),(Ramularia_sp._GU214690,Ramularia_coleosporii_GU214692))),Ramularia_endophylla_EU167569),(((((Passalora_arachidicola_EF157739,(Passalora_californica_CPC_18389,Passalora_californica_CPC_18391)),((((((Passalora_dodonaea_GU214641,Pseudocercospora_opuntiae_GU214679),(Dothistroma_pini_AF013227,Dothistroma_septosporum_GU256362),((Mycosphaerella_laricina_EU167595,Passalora_sequoiae_GU214667),(Passalora_ageratinae_GU214639,Passalora_sp._GU214668))),Pseudocercospora_rubi_AF362058),Pseudocercosporella_bakeri_GU570542),Passalora_brachycarpa_GU214664),Passalora_henningsii_AF284389)),(Passalora_bellynckii_AF222831,Passalora_dissiliens_AF222835,Passalora_vaginae_AF222832)),(Mycosphaerella_aurantia_EU851913,Mycosphaerella_africana_AY626981,Mycosphaerella_buckinghamiae_EU707856)),Passalora_fulva_AF393701))); [! TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr47816] END;