#NEXUS [written Sun Apr 14 14:20:16 CAT 2013 by Mesquite version 2.75 (build 564) at PC-de-Mika/127.0.0.1] BEGIN TAXA; TITLE Taxa_for_Ceratocystis_moniliformis_s.l._TEF1a_analysis; DIMENSIONS NTAX=20; TAXLABELS CMW36826_Ceratocystis_cryptoformis CMW36827_Ceratocystis_cryptoformis CMW36828_Ceratocystis_cryptoformis CMW36870_Ceratocystis_cryptoformis CMW36836_Ceratocystis_oblonga CMW36853_Ceratocystis_oblonga CMW23803_Ceratocystis_oblonga CMW30835_Ceratocystis_oblonga CMW36829_Ceratocystis_savannae CMW36858_Ceratocystis_savannae CMW30828_Ceratocystis_savannae CMW17300_Ceratocystis_savannae CMW25914_Ceratocystis_decipiens CMW25919_Ceratocystis_decipiens CMW25911_Ceratocystis_salinaria CMW25917_Ceratocystis_salinaria CMW15245_Thielaviopsis_ceramica CMW15248_Thielaviopsis_ceramica CMW9986_Ceratocystis_moniliformopsis CMW10214_Ceratocystis_moniliformopsis ; END; BEGIN CHARACTERS; TITLE Ceratocystis_moniliformis_TEF1a_alignments; DIMENSIONS NCHAR=786; FORMAT DATATYPE = DNA INTERLEAVE GAP = - MISSING = N; MATRIX CMW36826_Ceratocystis_cryptoformis GACATCAA-CCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCGTTTTGCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW36827_Ceratocystis_cryptoformis GACATCAA-TCGAACCGAA-CAAGATACGGATAATATGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW36828_Ceratocystis_cryptoformis GACATCAA-CCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTCGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW36870_Ceratocystis_cryptoformis GACATCAACCCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTCGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW36836_Ceratocystis_oblonga GACATCAA-TCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCG-ATTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW36853_Ceratocystis_oblonga GACATCAA-TCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW23803_Ceratocystis_oblonga GATACCAG-CCGAACTGAA-CAAGATACGGACAATGTGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTTAGTTTTGTACAGAGGTTGAGCTGATTT CMW30835_Ceratocystis_oblonga GACATCAA-TCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAAAGGTTGAGCTGATTT CMW36829_Ceratocystis_savannae GACATCAA-TCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCGTTTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW36858_Ceratocystis_savannae GACATCAA-TCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW30828_Ceratocystis_savannae GACATCAA-TCGAACCGAACCAAGATACGGATAATGTGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW17300_Ceratocystis_savannae GACATCAA-TCGAACCGAA-CAAGATACGGATAATGTGTGTTGCTGGCGGTGCG-TTTTCCACGCGGCGTTCAGTTTTGTACAGAGGTTGAGCTGATTT CMW25914_Ceratocystis_decipiens GACATCAA-TCGAACCGAA-CAAGATACCGATAGGGTGTGTTGCTAGCGATGCG-TTTTCCGCGCAGCGTTCAGTCTTGTACAGAGGTTGAGCTGATTT CMW25919_Ceratocystis_decipiens GACATCAA-TCGAACCGAA-CAAGATACCGATAGGGTGTGTTGCTAGCGATGCG-TTTTCCGCGCAGCGTTCAGTCTTGTACAGAGGTTGAGCTGATTT CMW25911_Ceratocystis_salinaria GACATCAA-TCGAACCGAA-CAAGATACCGATAGGGTGTGTTGCTAGCGATGCG-TTTTCCACGCAGCGTTCAGTCTTGTACAGAGGTTGAGCTGATTT CMW25917_Ceratocystis_salinaria GACATCAA-TCGAACCGAA-CAAGATACCGATAGGGTGTGTTGCTAGCGATGCG-TTTTCCACGCAGCGTTCAGTCTTGTACAGAGGTTGAGCTGATTT CMW15245_Thielaviopsis_ceramica GACATCAA-TCGAACCGAA-CAAGATACCGATAGGATGTGTTACTAGCGATGCG-TTTTCCACGCAGCGTTCAGTCTTGTACAGAGGTTGAGCTGATTT CMW15248_Thielaviopsis_ceramica GACATCAA-TCGAACCGAA-CAAGATACCGATAGGATGTGTTACTAGCGATGCG-TTTTCCACGCAGCGTTCAGTCTTGTACAGAGGTTGAGCTGATTT CMW9986_Ceratocystis_moniliformopsis GACACCAA-TCGAATCAAC-CAAGATACAGATCGGATGAGTTGCTGGTCATGCG-TTTTCCACGCAGCGTTTAGCCTTGCAAAGAGGTCGAGTTGTTTT CMW10214_Ceratocystis_moniliformopsis GACACCAA-TCGAATCAAC-CAAGATACAGATCGGATGAGTTGCTGGTCATGCG-TTTTCCACGCAGCGTTTAGCCTTGCAAAGAGGTCGAGTTGTTTT CMW36826_Ceratocystis_cryptoformis TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW36827_Ceratocystis_cryptoformis TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATGCAAGGGTATAATTACCCCG CMW36828_Ceratocystis_cryptoformis TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW36870_Ceratocystis_cryptoformis TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW36836_Ceratocystis_oblonga TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW36853_Ceratocystis_oblonga TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTAGAAAACATACAAGGGTATAATTACCCCG CMW23803_Ceratocystis_oblonga TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW30835_Ceratocystis_oblonga TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW36829_Ceratocystis_savannae TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW36858_Ceratocystis_savannae TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW30828_Ceratocystis_savannae TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW17300_Ceratocystis_savannae TGATGAGGCAGCACTACCCCGCCTCGCGGGGCAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTTGGAAAACATACAAGGGTATAATTACCCCG CMW25914_Ceratocystis_decipiens TGATGAGGCAGCACTACCCCGCCTGGCGGGGTAGTGTTGTATTGTGAAAAATTCTACTCTTTCCTCTTTAGGAAAACA--CAAGGGTATAATTACCCCG CMW25919_Ceratocystis_decipiens TGATGAGGCAGCACTACCCCGCCTGGCGGGGTAGTGTTGTATTGTGAAAAATTCTACTCTTTCCTCTTTAGGAAAACA--CAAGGGTATAATTACCCCG CMW25911_Ceratocystis_salinaria TGATGAGGCAGCACTACCCCGCCTGGCGGGGTAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTAGGAAAACATACAAGGGTATAATTACCCCG CMW25917_Ceratocystis_salinaria TGATGAGGCAGCACTACCCCGCCTGGCGGGGTAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTAGGAAAACATACAAGGGTATAATTACCCCG CMW15245_Thielaviopsis_ceramica TGATGAGGCAGCACTACCCCGCCTGGCGGGGTAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTAGGAAAACATACAAGGGTATAATTACCCCG CMW15248_Thielaviopsis_ceramica TGATGAGGCAGCACTACCCCGCCTGGCGGGGTAGTGTTGTGTTGTGAAAAATTCTACTCTTTCCTCTTTAGGAAAACATACAAGGGTATAATTACCCCG CMW9986_Ceratocystis_moniliformopsis TCATGAGGCAACACTGCCCCGCCTGGCGGGGTAGTTTTGTGTTGTGGAAAATTCTACTCTTTCCTCTTTGGGAAGCTATACAAGGGTGTTATTACCCCG CMW10214_Ceratocystis_moniliformopsis TCATGAGGCAACACTGCCCCGCCTGGCGGGGTAGTTTTGTGTTGTGGAAAATTCTACTCTTTCCTCTTTGGGAAGCTATACAAGGGTGTTATTACCCCG CMW36826_Ceratocystis_cryptoformis CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36827_Ceratocystis_cryptoformis CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36828_Ceratocystis_cryptoformis CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36870_Ceratocystis_cryptoformis CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36836_Ceratocystis_oblonga CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAATCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36853_Ceratocystis_oblonga CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW23803_Ceratocystis_oblonga CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACTGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW30835_Ceratocystis_oblonga CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36829_Ceratocystis_savannae CTGTTTTGTACCCTGCACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW36858_Ceratocystis_savannae CCGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW30828_Ceratocystis_savannae CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW17300_Ceratocystis_savannae CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACAGTCT--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW25914_Ceratocystis_decipiens CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGCAAGGTACCCTGGTCATACACATACAGTCC--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW25919_Ceratocystis_decipiens CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGCAAGGTACCCTGGTCATACACATACAGTCC--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW25911_Ceratocystis_salinaria CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACGGTCC--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW25917_Ceratocystis_salinaria CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACACATACGGTCC--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW15245_Thielaviopsis_ceramica CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACGCATACAGTCC--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW15248_Thielaviopsis_ceramica CTGTTTTGTACCCTGTACAAGGACCCGCTGTGTGGGAAGGTACCCTGGTCATACGCATACAGTCC--ATGCATGCTCTTTGGCATGATAGTGTCTTGTT CMW9986_Ceratocystis_moniliformopsis CTGTTTTGTCCCCTGTACAAGGACCCGCTGTGTGAAAGGGCACCCTGGTCATCTCCATCCCATCTACATGCAAGGTCTCTTGCACGA---CGTCTTGTT CMW10214_Ceratocystis_moniliformopsis CTGTTTTGTCCCCTGTACAAGGACCCGCTGTGTGAAAGGGCACCCTGGTCATCTCCATCCCATCTACATGCAAGGTCTCTTGCACGA---CGTCTTGTT CMW36826_Ceratocystis_cryptoformis TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36827_Ceratocystis_cryptoformis TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36828_Ceratocystis_cryptoformis TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36870_Ceratocystis_cryptoformis TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36836_Ceratocystis_oblonga TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36853_Ceratocystis_oblonga TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW23803_Ceratocystis_oblonga TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW30835_Ceratocystis_oblonga TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36829_Ceratocystis_savannae TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36858_Ceratocystis_savannae TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW30828_Ceratocystis_savannae TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW17300_Ceratocystis_savannae TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW25914_Ceratocystis_decipiens TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW25919_Ceratocystis_decipiens TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW25911_Ceratocystis_salinaria TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW25917_Ceratocystis_salinaria TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGTACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW15245_Thielaviopsis_ceramica TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGCACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW15248_Thielaviopsis_ceramica TGGGTGTTGGTTCGCACTTCATCTGGCATCATATACTGACCTACTTTGCACAGGAGGCTGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW9986_Ceratocystis_moniliformopsis TGATTATTGGTTAGCACTTAGTCTAGGATCATGTACTGACCTACTTTGCACAGGAGGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW10214_Ceratocystis_moniliformopsis TGATTATTGGTTAGCACTTAGTCTAGGATCATGTACTGACCTACTTTGCACAGGAGGCCGCCGAGCTCGGTAAGGGTTCCTTCAAGTACGCCTGGGTTC CMW36826_Ceratocystis_cryptoformis TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36827_Ceratocystis_cryptoformis TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36828_Ceratocystis_cryptoformis TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36870_Ceratocystis_cryptoformis TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36836_Ceratocystis_oblonga TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36853_Ceratocystis_oblonga TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW23803_Ceratocystis_oblonga TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW30835_Ceratocystis_oblonga TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36829_Ceratocystis_savannae TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36858_Ceratocystis_savannae TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW30828_Ceratocystis_savannae TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCRCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW17300_Ceratocystis_savannae TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW25914_Ceratocystis_decipiens TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW25919_Ceratocystis_decipiens TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW25911_Ceratocystis_salinaria TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW25917_Ceratocystis_salinaria TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW15245_Thielaviopsis_ceramica TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW15248_Thielaviopsis_ceramica TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATCGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW9986_Ceratocystis_moniliformopsis TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATTGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW10214_Ceratocystis_moniliformopsis TTGACAAGCTCAAGGCCGAGCGTGAGCGTGGTATCACTATCGATATTGCCCTCTGGAAGTTCGAGACCCCCAAGTACTACGTCACCGTCATTGGTAAGT CMW36826_Ceratocystis_cryptoformis TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36827_Ceratocystis_cryptoformis TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36828_Ceratocystis_cryptoformis TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36870_Ceratocystis_cryptoformis TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36836_Ceratocystis_oblonga TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36853_Ceratocystis_oblonga TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW23803_Ceratocystis_oblonga TTATCATGGAATCATACTGTCACATCCGAACTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW30835_Ceratocystis_oblonga TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36829_Ceratocystis_savannae TTATCATGGAATCATACTGTCACCTCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36858_Ceratocystis_savannae TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW30828_Ceratocystis_savannae TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW17300_Ceratocystis_savannae TTATCATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTTGTTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW25914_Ceratocystis_decipiens TTATCATGGAATCATACTGCCACATCCGATCTTGTTCTAACAAACTTCATTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW25919_Ceratocystis_decipiens TTATCATGGAATCATACTGCCACATCCGATCTTGTTCTAACAAACTTCATTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW25911_Ceratocystis_salinaria TTATTATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTCATTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW25917_Ceratocystis_salinaria TTATTATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTCATTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW15245_Thielaviopsis_ceramica TTATTATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTCATTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW15248_Thielaviopsis_ceramica TTATTATGGAATCATACTGTCACATCCGATCTTGTTCTAACAAACTTCATTACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW9986_Ceratocystis_moniliformopsis TTATTTCGGACTCA---TGTCATATTCGATCTATTTCTAACAATCGTCATCACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW10214_Ceratocystis_moniliformopsis TTATTTCGGACTCA---TGTCATATTCGATCTATTTCTAACAATCGTCATCACAGATGCCCCTGGTCACAGAGATTTCATCAAGAACATGATCACCGGT CMW36826_Ceratocystis_cryptoformis ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36827_Ceratocystis_cryptoformis ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36828_Ceratocystis_cryptoformis ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36870_Ceratocystis_cryptoformis ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36836_Ceratocystis_oblonga ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36853_Ceratocystis_oblonga ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW23803_Ceratocystis_oblonga ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW30835_Ceratocystis_oblonga ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36829_Ceratocystis_savannae ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36858_Ceratocystis_savannae ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW30828_Ceratocystis_savannae ACCTCGCAGGCTGACTGCRCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW17300_Ceratocystis_savannae ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW25914_Ceratocystis_decipiens ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW25919_Ceratocystis_decipiens ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW25911_Ceratocystis_salinaria ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW25917_Ceratocystis_salinaria ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW15245_Thielaviopsis_ceramica ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW15248_Thielaviopsis_ceramica ACCTCGCAGGCTGACTGCGCCATTCTCATCATTGCTGCCGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW9986_Ceratocystis_moniliformopsis ACTTCGCAGGCTGACTGCGCCATTCTTATCATTGCCGCTGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW10214_Ceratocystis_moniliformopsis ACTTCGCAGGCTGACTGCGCCATTCTTATCATTGCCGCTGGTACTGGTGAGTTCGAGGCTGGTATCTCCAAGGATGGTCAGACCCGTGAGCACGCTCTT CMW36826_Ceratocystis_cryptoformis CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATTATC CMW36827_Ceratocystis_cryptoformis CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATTATC CMW36828_Ceratocystis_cryptoformis CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATTATC CMW36870_Ceratocystis_cryptoformis CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATTATC CMW36836_Ceratocystis_oblonga CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW36853_Ceratocystis_oblonga CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW23803_Ceratocystis_oblonga CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCNNNNNNNNNNN CMW30835_Ceratocystis_oblonga CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW36829_Ceratocystis_savannae CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW36858_Ceratocystis_savannae CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW30828_Ceratocystis_savannae CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW17300_Ceratocystis_savannae CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCNNN CMW25914_Ceratocystis_decipiens CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW25919_Ceratocystis_decipiens CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW25911_Ceratocystis_salinaria CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW25917_Ceratocystis_salinaria CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCAGGAGATCATC CMW15245_Thielaviopsis_ceramica CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCNNNNNNNNNNN CMW15248_Thielaviopsis_ceramica CTTGCCTTCACCCTCGGTGTTAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCNNNNNNNNNNN CMW9986_Ceratocystis_moniliformopsis CTTGCTTTCACCCTCGGTGTCAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCNNNNNNNNNNN CMW10214_Ceratocystis_moniliformopsis CTTGCTTTCACCCTCGGTGTCAAGCAGCTGATCGTTGCCATCAACAAGATGGACACCACCAAGTGGTCCGAGGCCCGTTACCNNNNNNNNNNN ; END; BEGIN TREES; Title Most_ParsimoniousTrees_from_Ceratocystis_moniliformis_s.l._TEF1a_analysis; LINK Taxa = Taxa_for_Ceratocystis_moniliformis_s.l._TEF1a_analysis; TRANSLATE 1 CMW36826_Ceratocystis_cryptoformis, 2 CMW36827_Ceratocystis_cryptoformis, 3 CMW36828_Ceratocystis_cryptoformis, 4 CMW36870_Ceratocystis_cryptoformis, 5 CMW36836_Ceratocystis_oblonga, 6 CMW36853_Ceratocystis_oblonga, 7 CMW23803_Ceratocystis_oblonga, 8 CMW30835_Ceratocystis_oblonga, 9 CMW36829_Ceratocystis_savannae, 10 CMW36858_Ceratocystis_savannae, 11 CMW30828_Ceratocystis_savannae, 12 CMW17300_Ceratocystis_savannae, 13 CMW25914_Ceratocystis_decipiens, 14 CMW25919_Ceratocystis_decipiens, 15 CMW25911_Ceratocystis_salinaria, 16 CMW25917_Ceratocystis_salinaria, 17 CMW15245_Thielaviopsis_ceramica, 18 CMW15248_Thielaviopsis_ceramica, 19 CMW9986_Ceratocystis_moniliformopsis, 20 CMW10214_Ceratocystis_moniliformopsis; TREE PAUP_1 = ((((((2:2.0,(1:1.0,(3:0.0,4:0.0):1.0,7:3.0):1.0):1.0,5:1.0,6:0.0,8:0.0,9:1.0,10:0.0,11:0.0,12:0.0):13.0,(13:0.0,14:0.0):6.0):1.0,(15:0.0,16:0.0):1.0):2.0,(17:0.0,18:0.0):2.0):33.0,(19:0.0,20:0.0):48.0):0.0; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 786; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 786; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 786; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1365942016139; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5736539159804406978; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 5067203415537943052; mqVersion 275; checksumv 0 3 4267825160 null getNumChars 786 numChars 786 getNumTaxa 20 numTaxa 20 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 354635.0 sumSquares 9.223372036854985E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1276 674; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;