#NEXUS [written Mon Dec 09 08:55:39 EST 2013 by Mesquite version 2.75 (build 566) at spiekeries/192.168.2.10] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=78; TAXLABELS Phytophthora_katsurae_P6921_HQ261599 Phytophthora_heveae_P1000_HQ261574 Phytophthora_multivesiculata_P10670_HQ261624 Phytophthora_multivesiculata_CBS_54596_HQ643288 Phytophthora_bisheria_P7191_HQ261501 Phytophthora_bisheria_P11311_HQ261502 Phytophthora_bisheria_P10117_HQ261503 Phytophthora_citricola_STEU6750_GU133568 Phytophthora_citricola_CBS_22188_HQ643201 Phytophthora_capensis_P1823_GU191231 Phytophthora_capensis_P1819_GU191232 Phytophthora_sp._emzansi_STEU6272_GU191220 Phytophthora_sp._emzansi_STEU6269_GU191228 Phytophthora_plurivora_PLU77_FJ665230 Phytophthora_plurivora_P1611_GU191233 Phytophthora_plurivora_CBS_124091_FJ665229 Phytophthora_plurivora_PLU92_FJ665231 Phytophthora_plurivora_CBS_124089_FJ665227 'Phytophthora sp. AL-2010b P1212 HQ261706 CTR2' P1200_CTR2 Phytophthora_glovera_P10619 Phytophthora_sp._capsici_P10386_HQ261520 Phytophthora_capsici_P1319_HQ261519 Phytophthora_siskiyouensis_P16301_HQ261672 Phytophthora_siskiyouensis_P15122_HQ261674 Phytophthora_tropicalis_CBS_43491_HQ643369 Phytophthora_tropicalis_P6522_HQ261720 Phytophthora_mengei_P0513_GU191234 Phytophthora_mengei_P10139_HQ261619 Phytophthora_mengei_P1275_HQ261618 Phytophthora_mengei_P1165_GU191235 Phytophthora_botryosa_P6944_HQ261508 Phytophthora_botryosa_CBS_58169_HQ643151 Phytophthora_botryosa_P6945_HQ261507 Phytophthora_botryosa_P3425_HQ261509 Phytophthora_botryosa_P1044_HQ261510 Phytophthora_aff._botryosa_CBS_23828_HQ643139 Phytophthora_aff._botryosa_CBS_23530_HQ643140 P3771_CTR3 STEU7430 P7487_CTR1 P3079_CTR1 P0318_CTR1 P3078_CTR1 STEU7420 Phytophthora_citrophthora_STEU6751_GU133567 Phytophthora_citrophthora_3BO_FJ874794 Phytophthora_citrophthora_163_AY228564_Cohen_G1 Phytophthora_citrophthora_pa29_AY228567_Cohen_G1 Phytophthora_citrophthora_pa110_AY228566_Cohen_G1 Phytophthora_citrophthora_pa96_AY228576_Cohen_G1 Phytophthora_citrophthora_pa68_AY228575_Cohen_G1 Phytophthora_citrophthora_pa67_AY228574_Cohen_G1 Phytophthora_citrophthora_pa55_AY228572_Cohen_G1 Phytophthora_citrophthora_pa34_AY228569_Cohen_G1 Phytophthora_citrophthora_pa3_AY228568_Cohen_G1 Phytophthora_meadii_P6128_HQ261607 Phytophthora_citrophthora_435_AY228565_Cohen_G2 Phytophthora_citrophthora_pa47_AY228571_Cohen_G2 Phytophthora_citrophthora_pa36_AY228570_Cohen_G2 Phytophthora_citrophthora_P114_AY228577_Cohen_G2 Phytophthora_citrophthora_pa65_AY228573_Cohen_G2 Phytophthora_meadii_CBS_21988_HQ643268 Phytophthora_colocasiae_P6317_HQ261539 Phytophthora_colocasiae_P6290_HQ261540 Phytophthora_himalsilva_86_HM752789 Phytophthora_himalsilva_73_HM752788 Phytophthora_himalsilva_72_HM752787 Phytophthora_himalsilva_61_HM752786 Phytophthora_himalsilva_60_HM752785 Phytophthora_himalsilva_44_HM752784 Phytophthora_citrophthora_CBS_111339_HQ643207 Phytophthora_citrophthora_P10368_HQ261535 Phytophthora_citrophthora_P10341_HQ261536 Phytophthora_citrophthora_CBS_95087_HQ643205 Vi11 Phytophthora_citrophthora_CBS_111726_HQ643206 Phytophthora_citrophthora_CBS_111338_HQ643208 ; END; BEGIN CHARACTERS; TITLE ITS_representative_isolates_only; DIMENSIONS NCHAR=763; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Phytophthora_katsurae_P6921_HQ261599 GC-GAGTTTGGCG--GCGGCTGCTGGCTTTGGCTGGCTGGCTG-----CTGCTGGACGAGCTCTATCATGGCGAGCGTTTGGACTTCGGTCTGAACTAGTAGC--CCTTCTTTTAAACCCATTTCTAATTACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACAACAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGAGATGCCAGATGTGAAGTGTCTTGCG-GCTGG----TTCTCGAACTG---GCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-CCTCTTTGCTCAAAAAGCATGGCGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCATGTCGGCGACCGGTCTGTCTGCTGCGGCG--TTAATGGAGGCGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATGCGCTTATTGGATGTGTTTCCTGCTGTGGCGGTAATGGCTGGTGTACCGTAGCTATGTGGCGCTTGGCTTTTGAATCGGCTTTGCTGTTGTGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTGGGAAATTTGTGTGTGCCTTTATTGGCGTG Phytophthora_heveae_P1000_HQ261574 GC-GAGTTTGGCG--GCTGCTG--------------------------CTGCTGGACGAGCTCTATCATGGCGAGCGTTTGGACTTCGGTCTGAACTAGTAGC--CCTTCTTTTAAACCCATTCCTAATTACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACAACAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGAGATGCCAGATGTGAAGTGTCTTGCG-GCTGG----TTCTCGAACTG---GCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCATGGCGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCATGTCGGCGACCGGTCTGTCTGCTGCAGCG--TTAATGGAGGCGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAATGCGCTTATTGGATGTGTTTCCTGTTGTGGCGGTAATGGCTGGTGTACCGTAGCTATGTGGTGCTTGGCTTTTGAATCGGCTTTGCTGTTGTGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTGGGAAATTTGTGTGTGCCTTTATTGGCGTG Phytophthora_multivesiculata_P10670_HQ261624 GTCTTGCTTGGCG-TGCGGCTGCTGGCCTTTATTGGTTGGCTGGCTGCGTGCTGGGCGAGCCCTATCATGGCGATCGTTTGGACCTCGGTCTGAGCTAGTAGC--TTTTGTTTTAAACCCATTCTTTAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGAGACGTCAGATGTGAAGTGTCTTGCG-GTTGG----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACTCTCTCTTTGCTCGAAAAGCGTGGTATTGTTGGTTGTGGAGACTGCCTGTGTGGCCAGTCGGCGACCGGTTTGTCTGCTACGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-ACGCTTATTGGACGTTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTTTGGCTTGGTCTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGCGGCGGCTTCGGCTGTCGAGGGGTCGATCCA-TTTTGGGAA-GTTTGTGTGTACTTC--GGTGCG Phytophthora_multivesiculata_CBS_54596_HQ643288 GTCTTGCTTGGCG-TGCGGCTGCTGGCCTTTATTGGTTGGCTGGCTGCGTGCTGGGCGAGCCCTATCATGGCGATCGTTTGGACCTCGGTCTGAGCTAGTAGC--TTTTGTTTTAAACCCATTCTTTAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGAGACGTCAGATGTGAAGTGTCTTGCG-GTTGG----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACTCTCTCTTTGCTCGAAAAGCGTGGTATTGTTGGTTGTGGAGACTGCCTGTGTGGCCAGTCGGCGACCGGTTTGTCTGCTACGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-ACGCTTATTGGACGTTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTTTGGCTTGGTCTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGCGGCGGCTTCGGCTGTCGAGGGGTCGATCCA-TTTTGGGAA-GTTTGTGTGTACTTC--GGTGCG Phytophthora_bisheria_P7191_HQ261501 AT-TTGCTTGGTGTGCGGCTAGCTGGCCTTTATTGGCTGGCAGGCTGCGTGCTGGGCGAGTCCTATCATGGCAAACGTTTGGGCTTCGGTCTGAGCAAGTAGC-----TTTTTTTAAACCATTTCTTAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGATGTGAAGTGTCTTGCG-GCTGG----CTTTCGGGTCGG-CTGCGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGTGAGGCGTTGCTGGTTGTGGAGGCTGCCCGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGTGTTTTACTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGGACGTTTTCCCTGCTGTGGCGTGATGAGCTGGTGAACCGTAGCTATGTA-GGCTTGGCTTTTGAACCGGTGATACTATTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGGCCGATCCC-TTTTGGGAAACTTTGTGTGTACTTC--GGTGCG Phytophthora_bisheria_P11311_HQ261502 AT-TTGCTTGGTGTGCGGCTAGCTGGCCTTTATTGGCTGGCAGGCTGCGTGCTGGGCGAGTCCTATCATGGCAAACGTTTGGGCTTCGGTCTGAGCAAGTAGC-----TTTTTTTAAACCATTTCTTAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGATGTGAAGTGTCTTGCG-GCTGG----CTTTCGGGTCGG-CTGCGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGTGAGGCGTTGCTGGTTGTGGAGGCTGCCCGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGTGTTTTACTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGGACGTTTTCCCTGCTGTGGCGTGATGAGCTGGTGAACCGTAGCTATGTA-GGCTTGGCTTTTGAACCGGTGATACTATTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGGTCGATCCA-TTTTGGGAAACTTTGTGTGTACTTC--GGTGCG Phytophthora_bisheria_P10117_HQ261503 AT-TTGCTTGGTGTGCGGCTAGCTGGCCTTTATTGGCTGGCAGGCTGCGTGCTGGGCGAGTCCTATCATGGCAAACGTTTGGGCTTCGGTCTGAGCAAGTAGC-----TTTTTTTAAACCATTTCTTAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATATGCCAGATGTGAAGTGTCTTGCG-GCTGG----CTTTCGGGTCGG-CTGCGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGTGAGGCGTTGCTGGTTGTGGAGGCTGCCCGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGTGTTTTACTGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGGACGTTTTCCCTGCTGTGGCGTGATGAGCTGGTGAACCGTAGCTATGTA-GGCTTGGCTTTTGAACCGGTGATACTATTGCGAAGTAGAGTGGCGGCTTCGGCTGCCGAGGGGTCGATCCA-TTTTGGGAAACTTTGTGTGTACTTC--GGTGCG Phytophthora_citricola_STEU6750_GU133568 GCCTTGC-TTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTAACACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCA-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGCGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGACTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGATTTGCTGTTGCGAAGTAGAGTGGCGGCTCCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGTGTGCACCTC--GGTGCG Phytophthora_citricola_CBS_22188_HQ643201 GTCTTGCTTTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGTGTGCACCTC--GGTGCG Phytophthora_capensis_P1823_GU191231 GTCTTGC-TTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCAACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---CCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCCAGTCGGCGACCAGTTTGTCTGCTGTGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-TTTTGTGTGCACCTC--GGTGCG Phytophthora_capensis_P1819_GU191232 GTCTTGC-TTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCAACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---CCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCCAGTCGGCGACCAGTTTGTCTGCTGTGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-TTTT------------------- Phytophthora_sp._emzansi_STEU6272_GU191220 GTCTTGC-TTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCAACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGCCG---CCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCCAGTCGGCGATCAGTTTGTCTGCTGTGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTATGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-TTTTGTGTGCACCTC--GGTGCG Phytophthora_sp._emzansi_STEU6269_GU191228 GTCTTGC-TTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCAACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGCCG---CCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGTGTGGCCAGTCGGCGATCAGTTTGTCTGCTGTGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTATGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-TTTTGTGTGCACCTC--GGTGCG Phytophthora_plurivora_PLU77_FJ665230 GTCTTGCTTTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGACGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGTGTGCACCTC--GGTGCG Phytophthora_plurivora_P1611_GU191233 GTCTTGCTTTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGACGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGT----------------- Phytophthora_plurivora_CBS_124091_FJ665229 GTCTTGCTTTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGACGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGTGTGCACCTC--GGTGCG Phytophthora_plurivora_PLU92_FJ665231 GTCTTGCTTTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCATACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGACGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGTGTGCACCTC--GGTGCG Phytophthora_plurivora_CBS_124089_FJ665227 GTCTTGCTTTTT-----------------------------------------TTGCGAGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTCTACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCATACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGACGTGAAGTGTCTTGCG-GGTGT----CCTTCGGGTCG---TCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA--TTTGGGAA-CTTTGTGTGCACCTC--GGTGCG 'Phytophthora sp. AL-2010b P1212 HQ261706 CTR2' GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTACGAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCGTGTTGT----CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCATGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCAATTTTGGGAA-CTTTGTGTGCACTTC--GGTGCT P1200_CTR2 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTACGAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCGTGTTGT----CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCATGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCAATTTTGGGAA-CTTTGTGTGCACTTC--GGTGCG Phytophthora_glovera_P10619 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCCGGGCGAGTAGC-TTTTTGTTTTAAACCCATTTCACAATTCTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCGTGTTGT----CCTTCGGGTCG---ACTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCAAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAAAGGAGGAGTGTCCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGAATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTTTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-TTTTGTGTGCACTTC--GGTGCG Phytophthora_sp._capsici_P10386_HQ261520 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCCGGGCGAGTAGC-TTTTTGTTTTAAACCCATTTCACAATTCTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCGTGTTGT----CCTTCGGGTCG---ACTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTTAAGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGAATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTTTGGCTTGGCTTTTGAATCGGTTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-TTTTGTGTGCACTTC--GGTGCG Phytophthora_capsici_P1319_HQ261519 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCCGGGCGAGTAGC-TTTTTGTTTTAAACCCATTTCACAATTCTGATTATACTGGGGGGACAAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGGGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGTTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCGTGTTGT----CCTTCGGGTCG---ACTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAAAGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGAATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTTTGGCTTGGCTTTTGAATCGGTTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCAATCCA-TTTTGGGAA-TTTTGTGTGCACTTC--GGTGCG Phytophthora_siskiyouensis_P16301_HQ261672 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC--TTTTGTTTTAAACCCATTTCACAATACTGATAATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTTGT---CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTACGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGACGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-CTTTGTGTGCACTTC--GGTGCG Phytophthora_siskiyouensis_P15122_HQ261674 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC--TTTTGTTTTAAACCCATTTCACAATACTGATAATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GGTTGT---CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTACGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGACGGCTTCGGCTGTCGA-GGGTCGATCCACTTTTGGGAA-CTTTGTGTGCACTTC--GGTGCG Phytophthora_tropicalis_CBS_43491_HQ643369 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGRCGAGTAGC-TTTTTGTTTTAAACCCATTTCTCAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGT---CCTTCGGGTCG---TCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-GTTTGTGTGCACCTC--GGTGCG Phytophthora_tropicalis_P6522_HQ261720 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCGAGTAGC-TTTTTGTTTTAAACCCATTTCTCAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGT---CCTTCGGGTCG---TCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-GTTTGTGTGCACCTC--GGTGCG Phytophthora_mengei_P0513_GU191234 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTCACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCCGGTTTGT---CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-CTTTGTGTGCACTTC-------- Phytophthora_mengei_P10139_HQ261619 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTCACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCCGGTTTGT---CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-CTTTGTGTGCACTTC--GGTGCG Phytophthora_mengei_P1275_HQ261618 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTCACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCCGGTTTGT---CCTTCGGGTCG---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-CTTTGTGTGCACTTC--GGTGCG Phytophthora_mengei_P1165_GU191235 GTCTTGT----------------------------------------------------ACCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTCACAATACTGATTATACTGCGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCCGGTTTGT---CCTTCGGGTCA---GCTGCGAGTCCTTTTAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GGGTCGATCCA-TTTTGGGAA-CTTTGTGTGCACTTC--GGTGCG Phytophthora_botryosa_P6944_HQ261508 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAATTTTGTGTGCGCTTTCGAGTGTG Phytophthora_botryosa_CBS_58169_HQ643151 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAATTTTGTGTGCGCTTTCGAGTGTG Phytophthora_botryosa_P6945_HQ261507 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGGCTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGTGGGCCGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_botryosa_P3425_HQ261509 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCCGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAATTTTGTGTGCGCTTTCGAGTGTG Phytophthora_botryosa_P1044_HQ261510 GTGGTGCTTGGGG-TTTTGTTG-------------------------------AGCCCCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCCGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAATTTTGTGTGCGCTTTCGAGTGTG Phytophthora_aff._botryosa_CBS_23828_HQ643139 ----------GCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAMTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_aff._botryosa_CBS_23530_HQ643140 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-ACGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAATTTTGTGTGCGCTTTCGAGTGTG P3771_CTR3 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTAASAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAAMTTTTGTGTGCGCTTTC------- STEU7430 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTT-------------------- P7487_CTR1 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG P3079_CTR1 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG P0318_CTR1 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG P3078_CTR1 ----TGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAACCCATTTAASAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTG-------------- STEU7420 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCRGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTT----------------------------- Phytophthora_citrophthora_STEU6751_GU133567 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCAGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_3BO_FJ874794 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAAAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGT--- Phytophthora_citrophthora_163_AY228564_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa29_AY228567_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTGTCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa110_AY228566_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa96_AY228576_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGCGTG Phytophthora_citrophthora_pa68_AY228575_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa67_AY228574_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTGGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTCGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGGGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa55_AY228572_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCAGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa34_AY228569_Cohen_G1 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGTCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa3_AY228568_Cohen_G1 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_meadii_P6128_HQ261607 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_435_AY228565_Cohen_G2 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGATGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa47_AY228571_Cohen_G2 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCGATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGTAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGGTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAGGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa36_AY228570_Cohen_G2 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGAAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_P114_AY228577_Cohen_G2 GTGTTGCTTGGCA-TTCTGCTG-------------------------------AGCCGCGCCCCATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTAGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_pa65_AY228573_Cohen_G2 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_meadii_CBS_21988_HQ643268 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAA-CCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-ACGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_colocasiae_P6317_HQ261539 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAA-CCCTTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGWTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-ACGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_colocasiae_P6290_HQ261540 GTGTTGCTTGGCA-TTTTGCTG-------------------------------AGCCGCGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGC-TTTTTGTTTTAAA-CCCTTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTGTGTGCCTTCGGGCCGA-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGATGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-ACGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACTTTTGTGTGCGCTTTCGAGTGTG Phytophthora_himalsilva_86_HM752789 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_himalsilva_73_HM752788 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_himalsilva_72_HM752787 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_himalsilva_61_HM752786 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_himalsilva_60_HM752785 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_himalsilva_44_HM752784 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_CBS_111339_HQ643207 GTGTTGCTTGGCG-TTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTTTACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCGT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_P10368_HQ261535 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_P10341_HQ261536 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_CBS_95087_HQ643205 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCAGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Vi11 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_CBS_111726_HQ643206 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCGGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG Phytophthora_citrophthora_CBS_111338_HQ643208 GTGTTGCTTGGCGTTTTTGCTG-------------------------------AGCCACGCCCTATCATGGCGAATGTTTGGACTTCGGTCTGGGCTAGTAGCTTTTTTGTTTTAAACCCATTTAACAATACTGATTATACTGTGGGGACGAAAGTCTCTGCTTTTA--ACTAGATAGCAACTTTCAGCAGTGGATGTCTAGGCTCGCACATCGATGAAGAACGCTGCGAACTGCGATACGTAATGCGAATTGCAGGATTCAGTGAGTCATCGAAATTTTGAACGCATATTGCACTTCCGGGTTAGTCCTGGGAGTATGCCTGTATCAGTGTCCGTACATCAAACTTGGCTTTCTTCCTTCCGTGTAGTCGGTGGAGGATGTGCCAGATGTGAAGTGTCTTGCG-GTTTTTGTGCCTTCGGGCCAT-GGCTGCGAGTCCTTTGAAATGTACTGAACTGTACT-TCTCTTTGCTCGAAAAGCGTGGTGTTGCTGGTTGTGGAGGCTGCCTGCGTGGCCAGTCGGCGACCGGTTTGTCTGCTGCRGCG-TTTAATGGAGGAGTGTTCGATTCGCGGTATGGTTGGCTTCGGCTGAACAG-GCGCTTATTGTATGCTTTTCCTGCTGTGGCGTGATGGGCTGGTGAACCGTAGCTGTGTGTGGCTTGGCTTTTGAATCGGCTTTGCTGTTGCGAAGTAGAGTGGCGGCTTCGGCTGTCGA-GTGTCGATCCA-TTTTGGGAACGTTTGTGTGCGCTTTCGAGTGTG ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 763; END; BEGIN TREES; Title 'ITS ML - only representative isolates'; LINK Taxa = Taxa; TRANSLATE 1 Phytophthora_katsurae_P6921_HQ261599, 2 Phytophthora_heveae_P1000_HQ261574, 3 Phytophthora_multivesiculata_P10670_HQ261624, 4 Phytophthora_multivesiculata_CBS_54596_HQ643288, 5 Phytophthora_bisheria_P7191_HQ261501, 6 Phytophthora_bisheria_P11311_HQ261502, 7 Phytophthora_bisheria_P10117_HQ261503, 8 Phytophthora_citricola_STEU6750_GU133568, 9 Phytophthora_citricola_CBS_22188_HQ643201, 10 Phytophthora_capensis_P1823_GU191231, 11 Phytophthora_capensis_P1819_GU191232, 12 Phytophthora_sp._emzansi_STEU6272_GU191220, 13 Phytophthora_sp._emzansi_STEU6269_GU191228, 14 Phytophthora_plurivora_PLU77_FJ665230, 15 Phytophthora_plurivora_P1611_GU191233, 16 Phytophthora_plurivora_CBS_124091_FJ665229, 17 Phytophthora_plurivora_PLU92_FJ665231, 18 Phytophthora_plurivora_CBS_124089_FJ665227, 19 'Phytophthora sp. AL-2010b P1212 HQ261706 CTR2', 20 P1200_CTR2, 21 Phytophthora_glovera_P10619, 22 Phytophthora_sp._capsici_P10386_HQ261520, 23 Phytophthora_capsici_P1319_HQ261519, 24 Phytophthora_siskiyouensis_P16301_HQ261672, 25 Phytophthora_siskiyouensis_P15122_HQ261674, 26 Phytophthora_tropicalis_CBS_43491_HQ643369, 27 Phytophthora_tropicalis_P6522_HQ261720, 28 Phytophthora_mengei_P0513_GU191234, 29 Phytophthora_mengei_P10139_HQ261619, 30 Phytophthora_mengei_P1275_HQ261618, 31 Phytophthora_mengei_P1165_GU191235, 32 Phytophthora_botryosa_P6944_HQ261508, 33 Phytophthora_botryosa_CBS_58169_HQ643151, 34 Phytophthora_botryosa_P6945_HQ261507, 35 Phytophthora_botryosa_P3425_HQ261509, 36 Phytophthora_botryosa_P1044_HQ261510, 37 Phytophthora_aff._botryosa_CBS_23828_HQ643139, 38 Phytophthora_aff._botryosa_CBS_23530_HQ643140, 39 P3771_CTR3, 40 STEU7430, 41 P7487_CTR1, 42 P3079_CTR1, 43 P0318_CTR1, 44 P3078_CTR1, 45 STEU7420, 46 Phytophthora_citrophthora_STEU6751_GU133567, 47 Phytophthora_citrophthora_3BO_FJ874794, 48 Phytophthora_citrophthora_163_AY228564_Cohen_G1, 49 Phytophthora_citrophthora_pa29_AY228567_Cohen_G1, 50 Phytophthora_citrophthora_pa110_AY228566_Cohen_G1, 51 Phytophthora_citrophthora_pa96_AY228576_Cohen_G1, 52 Phytophthora_citrophthora_pa68_AY228575_Cohen_G1, 53 Phytophthora_citrophthora_pa67_AY228574_Cohen_G1, 54 Phytophthora_citrophthora_pa55_AY228572_Cohen_G1, 55 Phytophthora_citrophthora_pa34_AY228569_Cohen_G1, 56 Phytophthora_citrophthora_pa3_AY228568_Cohen_G1, 57 Phytophthora_meadii_P6128_HQ261607, 58 Phytophthora_citrophthora_435_AY228565_Cohen_G2, 59 Phytophthora_citrophthora_pa47_AY228571_Cohen_G2, 60 Phytophthora_citrophthora_pa36_AY228570_Cohen_G2, 61 Phytophthora_citrophthora_P114_AY228577_Cohen_G2, 62 Phytophthora_citrophthora_pa65_AY228573_Cohen_G2, 63 Phytophthora_meadii_CBS_21988_HQ643268, 64 Phytophthora_colocasiae_P6317_HQ261539, 65 Phytophthora_colocasiae_P6290_HQ261540, 66 Phytophthora_himalsilva_86_HM752789, 67 Phytophthora_himalsilva_73_HM752788, 68 Phytophthora_himalsilva_72_HM752787, 69 Phytophthora_himalsilva_61_HM752786, 70 Phytophthora_himalsilva_60_HM752785, 71 Phytophthora_himalsilva_44_HM752784, 72 Phytophthora_citrophthora_CBS_111339_HQ643207, 73 Phytophthora_citrophthora_P10368_HQ261535, 74 Phytophthora_citrophthora_P10341_HQ261536, 75 Phytophthora_citrophthora_CBS_95087_HQ643205, 76 Vi11, 77 Phytophthora_citrophthora_CBS_111726_HQ643206, 78 Phytophthora_citrophthora_CBS_111338_HQ643208; TREE 'ITS ML - representative isolates only' = (((((((((((((((((((((78:7.58E-8,46:1.0E-10)5:1.0E-10,75:1.0E-10)4:6.42E-8,54:1.0E-10)7:0.0014591079,45:1.0E-10)24:5.7871E-6,51:0.0014649493)10:7.39E-8,50:1.0E-10)3:6.66E-8,73:1.0E-10)0:1.538E-7,77:1.0E-10)0:1.538E-7,76:1.0E-10)0:1.0E-10,(((((53:0.0044202895,48:1.0E-10)6:8.39E-8,56:1.0E-10)0:1.55E-7,49:0.0014666307)0:6.45E-8,(52:1.0E-10,47:0.0014765997)8:6.66E-8)0:1.0E-10,74:1.0E-10)0:8.01E-8)8:1.0E-10,55:0.0014686914)66:0.0014674893,(((((67:1.0E-10,66:7.0E-8)0:1.564E-7,68:1.0E-10)0:1.34E-7,69:1.0E-10)1:7.6E-8,(71:1.0E-10,70:1.0E-10)0:1.0E-10)8:8.86E-8,72:0.0014733055)18:8.86E-8)81:0.0029534087,((((((((((65:1.99E-7,64:1.0E-10)78:0.0029656003[%triangled = on ],63:1.062E-7)63:0.0014747779,58:0.0014776312)1:7.29E-8,40:9.93E-8)3:7.29E-8,59:0.0059681333)1:6.5E-8,60:0.0014732195)0:7.56E-8,(((((61:0.0044342287,41:1.423E-7)1:8.94E-8,42:1.0E-10)0:8.55E-8,57:1.0E-10)0:1.0E-10,43:7.35E-8)0:1.551E-7,62:1.0E-10)0:7.56E-8)47:0.0014773164,((39:2.0E-10,38:0.0029555785)8:1.952E-7,44:7.87E-8)1:1.512E-7)3:7.48E-8,37:1.0E-10)47:0.0029560229,34:0.002955071)4:1.431E-7)27:0.0014767419,(36:0.0059758639,35:6.68E-8)44:0.0014710136)9:1.234E-7,32:1.0E-10)10:7.53E-8,33:7.53E-8)100:0.0232126808,(((((31:0.0016122529,30:1.52E-7)21:1.0E-10,28:1.0E-10)18:6.84E-8,29:6.84E-8)88:0.0040221448[%triangled = on ],((25:7.65E-8,24:1.0E-10)99:0.0071984614[%triangled = on ],(27:1.0E-10,26:1.668E-7)98:0.0083256948[%triangled = on ])13:9.66E-8)33:0.0045475225,(((23:0.0082767245,22:0.0016675454)78:0.0015693364,21:0.0032789832)99:0.0135747758,(20:7.27E-8,19:0.0016194937)93:0.007269992)15:1.495E-7)32:0.0051371828)41:0.003250773,(((((((18:1.0E-10,17:1.0E-10)66:0.0015715385,16:1.0E-10)17:7.52E-8,14:4.95E-8)23:4.95E-8,15:1.0E-10)67:0.0015687444[%triangled = on ],(((13:1.0E-10,12:1.0E-10)92:0.0047298182[%triangled = on ],11:9.68E-8)33:6.47E-8,10:6.47E-8)99:0.0096321647)60:0.0015794076,9:1.0E-10)31:1.0E-10,8:0.0111999568)95:0.013023928)87:0.0196143364,((6:1.0E-10,5:0.0028470446)22:1.0E-10,7:1.0E-10)100:0.0689778851[%triangled = on ])47:0.0013005765,(4:1.0E-10,3:1.0E-10)100:0.0296268069[%triangled = on ])100:0.0540369196,(2:0.0067192912,1:0.0038663712):0.0540369196)[% ] [% ] [% setBetweenBits = selected setBetweenBits = triangled ]; END; BEGIN TREES; Title 'ITS BA - only representative isolates'; LINK Taxa = Taxa; TRANSLATE 1 Phytophthora_katsurae_P6921_HQ261599, 2 Phytophthora_heveae_P1000_HQ261574, 3 Phytophthora_multivesiculata_P10670_HQ261624, 4 Phytophthora_multivesiculata_CBS_54596_HQ643288, 5 Phytophthora_bisheria_P7191_HQ261501, 6 Phytophthora_bisheria_P11311_HQ261502, 7 Phytophthora_bisheria_P10117_HQ261503, 8 Phytophthora_citricola_STEU6750_GU133568, 9 Phytophthora_citricola_CBS_22188_HQ643201, 10 Phytophthora_capensis_P1823_GU191231, 11 Phytophthora_capensis_P1819_GU191232, 12 Phytophthora_sp._emzansi_STEU6272_GU191220, 13 Phytophthora_sp._emzansi_STEU6269_GU191228, 14 Phytophthora_plurivora_PLU77_FJ665230, 15 Phytophthora_plurivora_P1611_GU191233, 16 Phytophthora_plurivora_CBS_124091_FJ665229, 17 Phytophthora_plurivora_PLU92_FJ665231, 18 Phytophthora_plurivora_CBS_124089_FJ665227, 19 'Phytophthora sp. AL-2010b P1212 HQ261706 CTR2', 20 P1200_CTR2, 21 Phytophthora_glovera_P10619, 22 Phytophthora_sp._capsici_P10386_HQ261520, 23 Phytophthora_capsici_P1319_HQ261519, 24 Phytophthora_siskiyouensis_P16301_HQ261672, 25 Phytophthora_siskiyouensis_P15122_HQ261674, 26 Phytophthora_tropicalis_CBS_43491_HQ643369, 27 Phytophthora_tropicalis_P6522_HQ261720, 28 Phytophthora_mengei_P0513_GU191234, 29 Phytophthora_mengei_P10139_HQ261619, 30 Phytophthora_mengei_P1275_HQ261618, 31 Phytophthora_mengei_P1165_GU191235, 32 Phytophthora_botryosa_P6944_HQ261508, 33 Phytophthora_botryosa_CBS_58169_HQ643151, 34 Phytophthora_botryosa_P6945_HQ261507, 35 Phytophthora_botryosa_P3425_HQ261509, 36 Phytophthora_botryosa_P1044_HQ261510, 37 Phytophthora_aff._botryosa_CBS_23828_HQ643139, 38 Phytophthora_aff._botryosa_CBS_23530_HQ643140, 39 P3771_CTR3, 40 STEU7430, 41 P7487_CTR1, 42 P3079_CTR1, 43 P0318_CTR1, 44 P3078_CTR1, 45 STEU7420, 46 Phytophthora_citrophthora_STEU6751_GU133567, 47 Phytophthora_citrophthora_3BO_FJ874794, 48 Phytophthora_citrophthora_163_AY228564_Cohen_G1, 49 Phytophthora_citrophthora_pa29_AY228567_Cohen_G1, 50 Phytophthora_citrophthora_pa110_AY228566_Cohen_G1, 51 Phytophthora_citrophthora_pa96_AY228576_Cohen_G1, 52 Phytophthora_citrophthora_pa68_AY228575_Cohen_G1, 53 Phytophthora_citrophthora_pa67_AY228574_Cohen_G1, 54 Phytophthora_citrophthora_pa55_AY228572_Cohen_G1, 55 Phytophthora_citrophthora_pa34_AY228569_Cohen_G1, 56 Phytophthora_citrophthora_pa3_AY228568_Cohen_G1, 57 Phytophthora_meadii_P6128_HQ261607, 58 Phytophthora_citrophthora_435_AY228565_Cohen_G2, 59 Phytophthora_citrophthora_pa47_AY228571_Cohen_G2, 60 Phytophthora_citrophthora_pa36_AY228570_Cohen_G2, 61 Phytophthora_citrophthora_P114_AY228577_Cohen_G2, 62 Phytophthora_citrophthora_pa65_AY228573_Cohen_G2, 63 Phytophthora_meadii_CBS_21988_HQ643268, 64 Phytophthora_colocasiae_P6317_HQ261539, 65 Phytophthora_colocasiae_P6290_HQ261540, 66 Phytophthora_himalsilva_86_HM752789, 67 Phytophthora_himalsilva_73_HM752788, 68 Phytophthora_himalsilva_72_HM752787, 69 Phytophthora_himalsilva_61_HM752786, 70 Phytophthora_himalsilva_60_HM752785, 71 Phytophthora_himalsilva_44_HM752784, 72 Phytophthora_citrophthora_CBS_111339_HQ643207, 73 Phytophthora_citrophthora_P10368_HQ261535, 74 Phytophthora_citrophthora_P10341_HQ261536, 75 Phytophthora_citrophthora_CBS_95087_HQ643205, 76 Vi11, 77 Phytophthora_citrophthora_CBS_111726_HQ643206, 78 Phytophthora_citrophthora_CBS_111338_HQ643208; TREE 'ITS BA - representative isolates only' = ((((((((75:0.001299,54:0.00132,46:0.001293)0.73:0.006473,78:0.00131,77:0.001232,74:0.001255,73:0.001177,56:0.001271,55:0.006794,53:0.018109,52:0.00127,51:0.006596,50:0.001207,49:0.006906,48:0.001251,47:0.006996,45:0.001357)0.95:0.00679,72:0.006869,71:0.001141,70:0.001229,69:0.001317,68:0.001211,67:0.001249,66:0.00125)0.99:0.015746,((((65:0.002125,64:0.001316)0.99:0.012451,63:0.001796)0.83:0.006636,62:0.001227,61:0.017861,60:0.006754,59:0.024002,58:0.006841,57:0.001312,43:0.001214,42:0.001196,41:0.001266,40:0.001385):0.006803,44:0.001458,39:0.00134,38:0.00925,37:0.001339)0.79:0.012163,(36:0.024743,35:0.001601)0.52:0.004934,34:0.012062,33:0.001208,32:0.001312)0.8:0.096022,(((31:0.007737,30:0.001438,29:0.001441,28:0.001405)0.99:0.017219[%triangled = on ],(27:0.00133,26:0.001435)0.99:0.034061[%triangled = on ],(25:0.001516,24:0.001411)1:0.029257[%triangled = on ])0.89:0.018095,((23:0.035127,22:0.009108)0.63:0.006164,21:0.016205)1:0.057568,(20:0.001444,19:0.007669)1:0.03003)0.87:0.022981)1:0.014393,((((18:0.001431,17:0.001347)0.99:0.00754,16:0.001322,15:0.001452,14:0.001296)0.64:0.009128[%triangled = on ],((13:0.001444,12:0.001423)1:0.019928[%triangled = on ],11:0.001392,10:0.0013)1:0.042072)0.76:0.009918,9:0.001353,8:0.045247)0.99:0.05607)0.51:0.081502,(7:0.00123,6:0.001259,5:0.01247)1:0.302531[%triangled = on ],(4:0.001214,3:0.001196)1:0.126096[%triangled = on ])1:0.232422,(2:0.028531,1:0.014589)1:0.232422)[% ] [% ] [% setBetweenBits = selected setBetweenBits = triangled ]; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 763; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 763; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1386597339814; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 8044066145380502121; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7957649196775967578; mqVersion 275; checksumv 0 3 3479770373 null getNumChars 763 numChars 763 getNumTaxa 78 numTaxa 78 short true bits 2305843009213693967 states 15 sumSquaresStatesOnly 1476752.0 sumSquares -9.22337203685423E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 430; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1750 734; setLocation 132 78; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #8044066145380502121 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 2; toggleUseWeights off; endTell; setAssignedID 879.1386597273623.5619025919245441271; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1320 667; setLocation 132 78; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.triangle; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;