#NEXUS [written Thu Oct 24 11:21:36 CAT 2013 by Mesquite version 2.74 (build 550) at ANGELICAMARDD46/10.211.55.3] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=36; TAXLABELS CMW37667_Teratosphaeria_zuluensis CMW37670_Teratosphaeria_zuluensis CMW37671_Readeriella_considenianae CMW37672_Teratosphaeria_zuluensis CMW37674_Readeriella_considenianae CMW37675_Readeriella_considenianae CMW37676_Readeriella_considenianae CMW37678_Readeriella_considenianae CMW37679_Teratosphaeria_zuluensis CMW37680_Readeriella_considenianae CMW38912_Pseudocercospora_crystallina CMW37687_Teratosphaeria_zuluensis CMW37688_Teratosphaeria_zuluensis CMW37690_Teratosphaeria_zuluensis CMW37693_Teratosphaeria_zuluensis CMW37695_Mycosphaerella_vietnamensis CMW37696_Mycosphaerella_vietnamensis CMW37697_Mycosphaerella_marksii CMW33962_Mycosphaerella_marksii CMW38913_Pseudocercospora_crystallina CMW37682_Mycosphaerella_marksii CMW37694_Mycosphaerella_marksii CMW38277_Mycosphaerella_marksii CMW37698_Pseudocercospora_crystallina CMW7773_Neofusicoccum_ribis CBS100163_Phaeobotryosphaeria_visci CMW3042_Pseudocercospora_crystallina CMW3033_Pseudocercospora_crystallina CMW4934_Mycosphaerella_ellipsoidea CMW14781_Mycosphaerella_marksii CMW5230_Mycosphaerella_marksii CMW17320_Teratosphaeria_zuluensis CMW15833_Teratosphaeria_zuluensis CMW4940_Teratosphaeria_molleriana CMW2734_Teratosphaeria_molleriana CMW5225_Mycosphaerella_endophytica ; END; BEGIN CHARACTERS; TITLE 'Matrix in file "EF_nexus.nex"'; DIMENSIONS NCHAR=272; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX CMW37667_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccattcgctgcaatacatcgccaggcagcatccgccattattg------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgaggtgggtaag CMW37670_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccattcgctgcaatacatcgccaggcagcatccgccattattg------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37671_Readeriella_considenianae ggggca---atttggcgtttggtggggt------------------------------------gcgaccgaaagcgcttggccttgcac--gagcgctatttgcctcca--atttgccagattgcgcttcctaccacccttcaacat----cattgccggaccacatctgtcatgattc------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37672_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcaataccaccgttcgctgcaatacatcgccaggcagcatccgctattattg------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37674_Readeriella_considenianae ggggca---atttggcgtttggtggggt------------------------------------gcgaccgaaagcgcttggccttgcac--gagcgctatttgcctcca--atttgccagattgcgcttcctaccacccttcaacat----cattgccggaccacatctgtcatgattc------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37675_Readeriella_considenianae ggggca---atttggcgtttggtggggt------------------------------------gcgaccgaaagcgcttggccttgcac--gagcgctatttgcctcca--atttgccagattgcgcttcctaccacccttcaacat----cattgccggaccacatctgtcatgattc------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37676_Readeriella_considenianae ggggca---atttggcgtttggtggggt------------------------------------gcgaccgaaagcgcttggccttgcac--gagcgctatttgcctcca--atttgccagattgcgcttcctaccacccttcaacat----cattgccggaccacatctgtcatgattc------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37678_Readeriella_considenianae ggggca---atttggcgtttggtggggt------------------------------------gcgaccgaaagcgcttggccttgcac--gagcgctatttgcctcca--atttgccagattgcgcttcctaccacccttcaacat----cattgccggaccacatctgtcatgattc------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37679_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcaataccaccgttcgctgcaatacatcgccaggcagcatccgctattattg------------------------------------------agagccgccg---ctgacatgactcacaggaggccgccaagttgggtaag CMW37680_Readeriella_considenianae ggggca---atttggcgtttggtggggt------------------------------------gcgaccgaaagcgcttggccttgcac--gagcgctatttgcctcca--atttgccagattgcgcttcctaccacccttcaacat----cattgccggaccacatctgtcatgattc------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW38912_Pseudocercospora_crystallina ggggcaaaatcatggtggggtgag--------------------------------agaaatttgcgcttgggcgtttgcggctccacgc-atgacttcatccatcaccgccatgatt--------ctcaaccaccctcaccaacagcgcccgcgcatctcgcatcgaccccaacaccat-------------------------------ctcactgcggcgacagcgcta---ataatatgtcctacaggaagccgccgagttgggtaag CMW37687_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccatgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccgttcgctgcaatacaccgccaggcagcatccgccatccttg------------------------------------------agagccgccg---ctgacatgactgacaggaagccgccgagttgggtaag CMW37688_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcaataccaccgttcgctgcaatacatcgccaggcagcatccgctattattg------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37690_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccattcgctgcaatacatcgccaggcagcatccgccattattg------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW37693_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccatgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccgttcgctgcaatacaccgccaggcagcatccgccatccttg------------------------------------------agagccgccg---ctgacatgactgacaggaagccgccgagttgggtaag CMW37695_Mycosphaerella_vietnamensis ggggcaaatttttggtgggctgtgggcttggtggggtac--------------tgaagatttcgacgct-acccacttccggcctgaggccatgacctca--ccagcccaacaacaccatctccgcctccat--------------------cttcgttgggcaccgacgacaacagcagcagcagctcacgtacctcttcatcacctcttcacatgctgact--------------------ctccacaggaagccgccgagctcggtaag CMW37696_Mycosphaerella_vietnamensis ggggcaaatttttggtgggctgtgggcttggtggggtac--------------tgaagatttcgacgct-acccacttccggcctgtggccatgacctca--ccagcccaacaacaccatctccgcctccat--------------------cttcgttgggcaccgacgacaacagcagcagcagctcacgtatcactt---catctcttcacatgctgaca--------------------ttccacaggaagccgccgagctcggtaag CMW37697_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggaac-----------ctgcgaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccactttttcctcctccat--------------------cattgtcgggcgccagcgacaacaccagcagcagcaatggcggcgcacgtgctcttccatactcgtcgaccatgatactg---atcatctgcctcacaggaagccgccgaactcggtaag CMW33962_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggtac-----------ctgcaaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccactttttcctcctccat--------------------cattgtcgggcgccagcgacaacaccagcagcagcaatggcggcgcacgtgctcttccatactcgtcgaccatgatactg---atcatctgcctcacaggaagccgccgaactcggtaag CMW38913_Pseudocercospora_crystallina ggggcaaaatcatggtggggtgag--------------------------------agaaatttgcgcttgggcgtttgcggctccacgc-atgacttcatccctcaccgccatgatt--------ctcaaccaccctcaccaacagcgcccgcgcatctcgcatcgaccccaacaccat-------------------------------ctcactgcggcgacagcgcta---ataatatgtcctacaggaagccaccgagttgggtaag CMW37682_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggtac-----------ctgcgaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccact-tttcctcctccac--------------------cattgtcgggcgccagcgacatcaccggcagcagcaatggcggcgcacgtgctcttacacattcgtcgaccacgatactg---atcatctgcctcacaggaagccgccgaactcggcaag CMW37694_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggtac-----------ctgcgaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccact-tttcctcctccac--------------------cattgtcgggcgccagcgacatcaccggcagcagcaatggcggcgcacgtgctcttacacattcgtcgaccacgatactg---atcatctgcctcacaggaagccgccgaactcggcaag CMW38277_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggtac-----------ctgcgaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccact-tttcctcctccac--------------------cattgtcgggcgccagcgacatcaccggcagcagcaatggcggcgcacgtgctcttacacattcgtcgaccacgatactg---atcatctgcctcacaggaagccgccgaactcggcaag CMW37698_Pseudocercospora_crystallina ggggcaaaatcatggtggggtgag--------------------------------agaaatttgcgcttgggggtttgcggctccacgc-atgacttcatccatcaccgccatgatt--------ctcaaccaccctcaccaacagcgcccgcgcatctcgcatcgaccccaacaccat-------------------------------ctcactgcggcgacagcgcta---ataatatgtcctacaggaagccgccgagttgggtaag CMW7773_Neofusicoccum_ribis ggggca---ttttggtggtggggttggcccgcgctaagcctcgttcgggctcggcaaaatgtccgcatctggtttttttgcgaccggcgtgcgaccgaagcgcacccctcgccagacacgccacgcatgtg-------------------------------------------------------------------------------------------cgaccagacg---ctaacggccatcccaggaagccgccgagctcggtaag CBS100163_Phaeobotryosphaeria_visci ggggca-tttttcgcagtgaggtgcgggcggcgctaggcctcgtttgtg-tcggcaaaatgcccccatc-gggcgtttggcgcccggcgtgaggccgacgctcgcccccctcgcctgc-------------g-------------------------------------------------aaaaaaatgaaaaatgctcgcgccactagacgcttgtgcgaccagaggcta---atgcgcgccactacaggaagccgccgagctcggtaag CMW3042_Pseudocercospora_crystallina ggggcaaaatcatggtggggtgcg--------------------------------agaaatttgcgcttgggcgtttgcggctccacgc-atgacttcatccatcaccgccatgatt--------ctcaaccaccctcaccaacagcgcccgcgcatctcgcatcgaccccaacaccat-------------------------------ctcactgcggcgacagcgcta---ataatatgtcctacaggaagccgccgagttgggtaag CMW3033_Pseudocercospora_crystallina ggggcaaaatcatggtggggtgcg--------------------------------agaaatttgcgcttgggcgtttgcggctccacgc-atgacttcatccatcaccgccatgatt--------ctcaaccaccctcaccaacagcgcccgcgcatctcgcatcgaccccaacaccat-------------------------------ctcactgcggcgacagcgcta---ataatatgtcctacaggaagccgccgagttgggtaag CMW4934_Mycosphaerella_ellipsoidea ggggcaaaatttggtgggctggtggggt------------------------gcgagaattttggcactttgccgcttgcggcctcaggccatgacctcattcacctacaacaccacc--------------------------accaaatgcctcattgggcatcgacgacaactccctca-----------cacgtgcaagacgtccagtcttcctccaacacattgctgaccatgctctctctcacaggaagccgccgagctcggtaag CMW14781_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggtac-----------ctgcgaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccactttttcctcctccat--------------------cattgtcgggcgccagcgacaacaccagcagcagcaatggcggcgcacgtgctcttccatactcgtcgaccatgatactg---atcatctgcctcacaggaagccgccgaactcggtaag CMW5230_Mycosphaerella_marksii ggggcaaaattttggtgggctgtgggcttggtggggtac-----------ctgcgaagatttcgacgct-acccacttccggcctgaggcaatgacctcatcctcgcccaacaccactttttcctcctccat--------------------cattgccgggcgccagcgacaacaccagcagcagcaatggcggcgcacgtgctcttccatactcgtcgaccatgatactg---atcatctgcctcacaggaagccgccgaactcggtaag CMW17320_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccatgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccgttcgctgcaatacaccgccaggcagcatccgccatccttg------------------------------------------agagccgccg---ctgacatgactgacaggaagccgccgagttgggtaag CMW15833_Teratosphaeria_zuluensis ggggca---atttggcgtttggtggggt------------------------------------gcgaccgatagcgcttggccttgcac--gagcgctatctgcctccaacattcgccagatcgcgctcactaccaccattcgctgcaatacatcgccaggcagcatccgccattattg------------------------------------------agagccgccg---ctgacatgactcacaggaagccgccgagttgggtaag CMW4940_Teratosphaeria_molleriana ggggca---atttggtgtttggtggggt------------------------------------gcgaccggcgacgcttggccctgcagtcgagcgtcacccgcctccaaaatcgtcacagcagcat------------------------cttcgcagaatcgcaattactactagcg------------------------------------------ggaacggtcg---ctgacatgcctcacaggaagccgccgagttgggtaag CMW2734_Teratosphaeria_molleriana ggggca---atttggtgtttggtggggt------------------------------------gcgaccggcgacgcttggccctgcagtcgagcgtcacccgcctccaaaatcgtcacagcagcat------------------------cttcgcagaatcgcaattactactagcg------------------------------------------ggaacggtcg---ctgacatgcctcacaggaagccgccgagttgggtaag CMW5225_Mycosphaerella_endophytica ggggcaaaatttggtgggctggtggggt------------------------gcgagaattttggcactttgccgcttgcggcctcaggccatgacctcattcacctacaacaccacc--------------------------accaaatgcctcattgggcatcgacgacaactccctca-----------cacgtgcaagacgtccagtcttcctccaacacattgctgaccatgctctctctcacaggaagccgccgagctcggtaag ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 272; END; BEGIN TREES; Title 'Trees from "EF_Mes.con"'; LINK Taxa = Taxa; TRANSLATE 1 CMW37667_Teratosphaeria_zuluensis, 2 CMW37670_Teratosphaeria_zuluensis, 3 CMW37671_Readeriella_considenianae, 4 CMW37672_Teratosphaeria_zuluensis, 5 CMW37674_Readeriella_considenianae, 6 CMW37675_Readeriella_considenianae, 7 CMW37676_Readeriella_considenianae, 8 CMW37678_Readeriella_considenianae, 9 CMW37679_Teratosphaeria_zuluensis, 10 CMW37680_Readeriella_considenianae, 11 CMW38912_Pseudocercospora_crystallina, 12 CMW37687_Teratosphaeria_zuluensis, 13 CMW37688_Teratosphaeria_zuluensis, 14 CMW37690_Teratosphaeria_zuluensis, 15 CMW37693_Teratosphaeria_zuluensis, 16 CMW37695_Mycosphaerella_vietnamensis, 17 CMW37696_Mycosphaerella_vietnamensis, 18 CMW37697_Mycosphaerella_marksii, 19 CMW33962_Mycosphaerella_marksii, 20 CMW38913_Pseudocercospora_crystallina, 21 CMW37682_Mycosphaerella_marksii, 22 CMW37694_Mycosphaerella_marksii, 23 CMW38277_Mycosphaerella_marksii, 24 CMW37698_Pseudocercospora_crystallina, 25 CMW7773_Neofusicoccum_ribis, 26 CBS100163_Phaeobotryosphaeria_visci, 27 CMW3042_Pseudocercospora_crystallina, 28 CMW3033_Pseudocercospora_crystallina, 29 CMW4934_Mycosphaerella_ellipsoidea, 30 CMW14781_Mycosphaerella_marksii, 31 CMW5230_Mycosphaerella_marksii, 32 CMW17320_Teratosphaeria_zuluensis, 33 CMW15833_Teratosphaeria_zuluensis, 34 CMW4940_Teratosphaeria_molleriana, 35 CMW2734_Teratosphaeria_molleriana, 36 CMW5225_Mycosphaerella_endophytica; TREE con_50_majrule = (26:0.235023,25:0.309416,(((((((((1:0.006324,(14:0.004987,33:0.002194)0.50:0.005214)0.50:2.76E-4,((((3:0.007266,10:0.003718)0.50:0.005422,8:0.009917)0.50:7.93E-4,(5:0.003896,6:0.003116)0.50:0.001454)0.50:0.01382,7:0.002368)1.00:0.140241)0.50:0.006969,2:0.011669)0.50:0.034536,(12:0.003102,(15:0.001386,32:0.007617)0.50:2.09E-4)1.00:0.045472)0.50:0.007848,9:0.007987)0.50:0.005571,4:0.0127)0.50:0.016364,13:0.008377)1.00:0.258093,(34:0.007026,35:0.00287)1.00:0.162035)1.00:0.176896,((((11:0.007039,(20:0.008613,(27:0.008389,28:0.00898)1.00:0.006922)0.50:0.016017)0.50:0.008764,24:0.007654)1.00:0.556977,((16:0.016595,17:0.020813)1.00:0.127335,((((18:0.011376,31:0.006028)1.00:0.004497,30:0.004649)0.50:0.016061,19:0.002837)1.00:0.012525,((21:0.001697,23:0.011668)0.50:6.0E-5,22:0.001724)1.00:0.022053)1.00:0.098487)1.00:0.257561)0.50:0.01555,(29:8.01E-4,36:0.003832)1.00:0.130555)1.00:0.324986)1.00:0.707415); TREE con_50_majrule = (26:0.235023,25:0.309416,(((((((((1:0.006324,(14:0.004987,33:0.002194):0.005214):2.76E-4,((((3:0.007266,10:0.003718):0.005422,8:0.009917):7.93E-4,(5:0.003896,6:0.003116):0.001454):0.01382,7:0.002368):0.140241):0.006969,2:0.011669):0.034536,(12:0.003102,(15:0.001386,32:0.007617):2.09E-4):0.045472):0.007848,9:0.007987):0.005571,4:0.0127):0.016364,13:0.008377):0.258093,(34:0.007026,35:0.00287):0.162035):0.176896,((((11:0.007039,(20:0.008613,(27:0.008389,28:0.00898):0.006922):0.016017):0.008764,24:0.007654):0.556977,((16:0.016595,17:0.020813):0.127335,((((18:0.011376,31:0.006028):0.004497,30:0.004649):0.016061,19:0.002837):0.012525,((21:0.001697,23:0.011668):6.0E-5,22:0.001724):0.022053):0.098487):0.257561):0.01555,(29:8.01E-4,36:0.003832):0.130555):0.324986):0.707415); END; BEGIN TREES; Title 'Trees from "EF_Mes_ParsHS.tre"'; LINK Taxa = Taxa; TRANSLATE 1 CMW37667_Teratosphaeria_zuluensis, 2 CMW37670_Teratosphaeria_zuluensis, 3 CMW37671_Readeriella_considenianae, 4 CMW37672_Teratosphaeria_zuluensis, 5 CMW37674_Readeriella_considenianae, 6 CMW37675_Readeriella_considenianae, 7 CMW37676_Readeriella_considenianae, 8 CMW37678_Readeriella_considenianae, 9 CMW37679_Teratosphaeria_zuluensis, 10 CMW37680_Readeriella_considenianae, 11 CMW38912_Pseudocercospora_crystallina, 12 CMW37687_Teratosphaeria_zuluensis, 13 CMW37688_Teratosphaeria_zuluensis, 14 CMW37690_Teratosphaeria_zuluensis, 15 CMW37693_Teratosphaeria_zuluensis, 16 CMW37695_Mycosphaerella_vietnamensis, 17 CMW37696_Mycosphaerella_vietnamensis, 18 CMW37697_Mycosphaerella_marksii, 19 CMW33962_Mycosphaerella_marksii, 20 CMW38913_Pseudocercospora_crystallina, 21 CMW37682_Mycosphaerella_marksii, 22 CMW37694_Mycosphaerella_marksii, 23 CMW38277_Mycosphaerella_marksii, 24 CMW37698_Pseudocercospora_crystallina, 25 CMW7773_Neofusicoccum_ribis, 26 CBS100163_Phaeobotryosphaeria_visci, 27 CMW3042_Pseudocercospora_crystallina, 28 CMW3033_Pseudocercospora_crystallina, 29 CMW4934_Mycosphaerella_ellipsoidea, 30 CMW14781_Mycosphaerella_marksii, 31 CMW5230_Mycosphaerella_marksii, 32 CMW17320_Teratosphaeria_zuluensis, 33 CMW15833_Teratosphaeria_zuluensis, 34 CMW4940_Teratosphaeria_molleriana, 35 CMW2734_Teratosphaeria_molleriana, 36 CMW5225_Mycosphaerella_endophytica; TREE PAUP_1 = (((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(12:0.0,15:0.0,32:0.0):5.0):0.0,(4:0.0,9:0.0,13:0.0):2.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,((11:0.0,20:1.0,24:1.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_2 = (((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(12:0.0,15:0.0,32:0.0):5.0):0.0,(4:0.0,9:0.0,13:0.0):2.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):0.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_3 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):0.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_4 = (((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(12:0.0,15:0.0,32:0.0):5.0):0.0,(4:0.0,9:0.0,13:0.0):2.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,24:1.0,(27:0.0,28:0.0):1.0):0.0,20:1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_5 = (((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(12:0.0,15:0.0,32:0.0):5.0):0.0,(4:0.0,9:0.0,13:0.0):2.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):1.0,27:0.0,28:0.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_6 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):0.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_7 = (((((1:1.0,2:0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0,14:0.0,33:0.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):0.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_8 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,((11:0.0,20:1.0,24:1.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_9 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,24:1.0,(27:0.0,28:0.0):1.0):0.0,20:1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_10 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):1.0,27:0.0,28:0.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_11 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,24:1.0,(27:0.0,28:0.0):1.0):0.0,20:1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_12 = (((((1:1.0,2:0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0,14:0.0,33:0.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,24:1.0,(27:0.0,28:0.0):1.0):0.0,20:1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_13 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):1.0,27:0.0,28:0.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_14 = (((((1:1.0,2:0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0,14:0.0,33:0.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,(((11:0.0,20:1.0,24:1.0):1.0,27:0.0,28:0.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_15 = (((((1:1.0,2:0.0,((4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):1.0,14:0.0,33:0.0):13.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):14.0):41.0,(34:0.0,35:0.0):20.0):42.0,((11:0.0,20:1.0,24:1.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; TREE PAUP_16 = ((((((1:1.0,2:0.0,14:0.0,33:0.0):1.0,(4:0.0,9:0.0,13:0.0):2.0,(12:0.0,15:0.0,32:0.0):5.0):14.0,(3:0.0,5:0.0,6:0.0,7:0.0,8:0.0,10:0.0):13.0):41.0,(34:0.0,35:0.0):20.0):42.0,((11:0.0,20:1.0,24:1.0,(27:0.0,28:0.0):1.0):56.0,(((16:3.0,17:6.0):44.0,((18:1.0,19:1.0,30:0.0,31:1.0):3.0,(21:0.0,22:0.0,23:0.0):6.0):20.0):55.0,(29:0.0,36:0.0):44.0):38.0):33.0):46.0,(25:29.0,26:71.0):43.0):0.0; END; BEGIN TREES; Title 'Tree block 3 from "EF_Mes_ParsBS.tre"'; LINK Taxa = Taxa; TRANSLATE 1 CMW37667_Teratosphaeria_zuluensis, 2 CMW37670_Teratosphaeria_zuluensis, 3 CMW37671_Readeriella_considenianae, 4 CMW37672_Teratosphaeria_zuluensis, 5 CMW37674_Readeriella_considenianae, 6 CMW37675_Readeriella_considenianae, 7 CMW37676_Readeriella_considenianae, 8 CMW37678_Readeriella_considenianae, 9 CMW37679_Teratosphaeria_zuluensis, 10 CMW37680_Readeriella_considenianae, 11 CMW38912_Pseudocercospora_crystallina, 12 CMW37687_Teratosphaeria_zuluensis, 13 CMW37688_Teratosphaeria_zuluensis, 14 CMW37690_Teratosphaeria_zuluensis, 15 CMW37693_Teratosphaeria_zuluensis, 16 CMW37695_Mycosphaerella_vietnamensis, 17 CMW37696_Mycosphaerella_vietnamensis, 18 CMW37697_Mycosphaerella_marksii, 19 CMW33962_Mycosphaerella_marksii, 20 CMW38913_Pseudocercospora_crystallina, 21 CMW37682_Mycosphaerella_marksii, 22 CMW37694_Mycosphaerella_marksii, 23 CMW38277_Mycosphaerella_marksii, 24 CMW37698_Pseudocercospora_crystallina, 25 CMW7773_Neofusicoccum_ribis, 26 CBS100163_Phaeobotryosphaeria_visci, 27 CMW3042_Pseudocercospora_crystallina, 28 CMW3033_Pseudocercospora_crystallina, 29 CMW4934_Mycosphaerella_ellipsoidea, 30 CMW14781_Mycosphaerella_marksii, 31 CMW5230_Mycosphaerella_marksii, 32 CMW17320_Teratosphaeria_zuluensis, 33 CMW15833_Teratosphaeria_zuluensis, 34 CMW4940_Teratosphaeria_molleriana, 35 CMW2734_Teratosphaeria_molleriana, 36 CMW5225_Mycosphaerella_endophytica; TREE PAUP_1 = (25:100.0,((((1:100.0,2:100.0,(4:100.0,9:100.0,13:100.0)79:79.0,(12:100.0,15:100.0,32:100.0)100:100.0,14:100.0,33:100.0)96:96.0,(3:100.0,5:100.0,6:100.0,7:100.0,8:100.0,10:100.0)100:100.0)100:100.0,(34:100.0,35:100.0)100:100.0)99:99.0,((11:100.0,20:100.0,24:100.0,27:100.0,28:100.0)100:100.0,(((16:100.0,17:100.0)100:100.0,((18:100.0,19:100.0,30:100.0,31:100.0)96:96.0,(21:100.0,22:100.0,23:100.0)100:100.0)100:100.0)100:100.0,(29:100.0,36:100.0)100:100.0)85:85.0)97:97.0)100:100.0,26:100.0)0; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 272; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 272; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1382606496115; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 3112520086615019957; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3285040295466594657; mqVersion 274; checksumv 0 2 700030943 null getNumChars 272 numChars 272 getNumTaxa 36 numTaxa 36 short true bits 1152921504606846991 states 15 sumSquaresStatesOnly 135861.0 sumSquares -4.2911738401466844E21 NumFiles 1 NumMatrices 1 errorReportedDuringRun; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState true false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1366 549; setLocation -8 -8; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setActive; desuppress; endTell; endTell; end;