#NEXUS [written Thu Nov 14 16:49:10 CET 2013 by Mesquite version 2.75 (build 566) at em186.ebc.uu.se/130.238.82.186] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=86; TAXLABELS Degelia_atlantica_I Degelia_atlantica_II Degelia_cyanoloma Degelia_gayana_I Degelia_gayana_II Degelia_plumbea_I Degelia_plumbea_II Degelia_plumbea_III Degeliella_rosulata Degeliella_versicolor Fuscoderma_amphibolum Fuscoderma_applanatum_I Fuscoderma_applanatum_II Fuscopannaria_ahlneri Fuscopannaria_cheiroloba Fuscopannaria_sorediata Fuscopannaria_ignobilis Fuscopannaria_pacifica_II Fuscopannaria_leucosticta Fuscopannaria_leucostictoides Fuscopannaria_maritima Fuscopannaria_olivacea Fuscopannaria_pacifica_I Fuscopannaria_praetermissa Fuscopannaria_protensa Fuscopannaria_sampaiana_I Fuscopannaria_sampaiana_II Joergensenia_cephalodina_I Joergensenia_cephalodina_II Leciophysma_finmarkicum Leciophysma_furfurascens Moelleropsis_nebulosa_I Moelleropsis_nebulosa_II Moelleropsis_nebulosa_III Pannaria_athroophylla_I Pannaria_athroophylla_II Pannaria_calophylla Pannaria_contorta Pannaria_dichroa Pannaria_farinosa Pannaria_hispidula Pannaria_hookeri Pannaria_insularis Pannaria_isabellina Pannaria_microphyllizans Pannaria_multifida Pannaria_pallida Pannaria_rubiginella_I Pannaria_rubiginosa Pannaria_sphinctrina Pannaria_subfusca Pannaria_tavaresii Parmeliella_appalachensis Parmeliella_incrassata Parmeliella_lacerata Parmeliella_nigrocincta Parmeliella_pannosa Parmeliella_cf._thysanota Parmeliella_triptophylla_I Parmeliella_triptophylla_II Physma_radians Protopannaria_pezizoides_I Protopannaria_pezizoides_II Psoroma_aphthosum Psoroma_echinaceum Psoroma_fruticulosum Psoroma_hypnorum_I Psoroma_hypnorum_II Psoroma_hypnorum_III Psoroma_hypnorum_IV Psoroma_hypnorum_V Psoroma_paleaceum Psoroma_saccharatum Psoroma_tenue Psorophorus_fuegiensis Psorophorus_pholidotus Santessoniella_arctophila Santessoniella_sp. Santessoniella_grisea Santessoniella_polychidioides Santessoniella_saximontana Staurolemma_oculatum Staurolemma_omphalarioides Vahliella_leucophaea Xanthopsoroma_contextum Xanthopsoroma_soccatum ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=408; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Degelia_atlantica_I CCGAGAGCGAAGCC--TGGCTTC--GGG-CCAACCGCCC-G-GCTCTTCACCCCGTGCGCACC--CCG-TCGCTTCGGCGGG------------CCGC-CGGGAGCTT----AACCCC-AAAGCGTCCGAGGAACCCAATAAAAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCATTCCGAGGGGCATGCCTGTCCGAGCGTCATGCCTCCCTCAAGCCTCGCTTGGTCC-TGGGCG-C-CGGCC-CCCCC-GAAA-GTCA-GTGGCAGCCCGG-GGC-TCCGAGCGTAGTAGT-GTCGCT-CCG-TCCGCCA Degelia_atlantica_II CCGAGAGCGAAGCC--TGGCTTC--GGG-CTAACCGCCC-G-GCTCTTCACCCCGTGCGCACC--CCG-TCGCTTCGGCGGG------------CCGC-CGGGAGCTT----AACCCC-AAAGCGTCCGAGGAACCCAATAAAAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCATTCCGAGGGGCATGCCTGTCCGAGCGTCATGCCTCCCTCAAGCCTCGCTTGGTCC-TGGGCG-C-CGGCC-CCCCC-GAAA-GTCA-GTGGCAGCCCGG-GGC-TCCGAGCGTAGTAGT-GTCGCT-CCG-TCCGCCA Degelia_cyanoloma CCGAGAGCGAAGCC--TGGCTTC--GGG-CCAACCGCCC-G-GCTCTTCACCCCGTGCGCACC--CCG-TCGCTTCGGCGGG--------TC--CCGC-CGGGAGCTT----AACCCC-AAAGCGTCCGAGGAACCCAATAAAAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAGTCATCGAATCTTTGAACGCACATTGCGCCCCCCGGCATTCCGAGGGGCATGCCTGTCCGAGCGTCATGCCTCCCTCAAGCCTCGCTTGGTCC-TGGGCG-C-CGGCCCCCCCC-GAAA-GTCA-GTGGCAGCCCGG-GGC-TCCGAGCGTAGTAGT-GTCGCT-CCG-TCCGCCA Degelia_gayana_I CGAATA---TAGGC--CGCTTTA-GGCT-CTGTTCAACCCG-CTTTTTCAGC-------------TGG-TCTTCTCGATAG-------------CCGA-TAGAGAGAG----TTTGTCGTATC-ATCAGCGTCGA-GAAAC-GACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTGGTATTCCAGTAGGCATGCCTGTTCGAGCGTCA-GAGATTTTCAAGTCTTGCTTGGTAC-TGGGTGTT---ACT-AGCC-TTAAA-GAGA-TTGGCAGTTAACAGT-GTTGGAGCGCAGCAGA-TGCGTT-CTT-CC-CCCA Degelia_gayana_II CGCATG---TAGGC--TGGTTCA-GGGT-CTATTCAACCCG-TTTTTTCCTG-------------CTG-TTTCCTCGGCAGG------------CCGA-TA-GG-AC-----AACCTTAAATCTATCAGCTTCAA-TAAAT-TACAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAGTGTGAATTGCAGAATTCCGTGAATCATCGAATCTTTGAACGCACATTGCGCCTATTGGTATTCCAATAGGCATGCCTGTTCGAGCGTTA-TAAACTTTCAAGCCTTGCTTGGTGT-TGGGCACT---ACT-TGCC-TTAAA-AGAA-TTGGTAGTCGG-GGT-GTCGGAGCGCAGTACA-TGCGTT-TTT-TA-TCCG Degelia_plumbea_I CCGAGTGAGGGCCT--TGGGTCC---------A---CCTC-------CAACCCTTTGTTGACC---TG-TTGCCTCGGGGGC-CGACGC-----CCCC-CGACGGACC--A-AACCCTGTGT-CGTCGGAGTACT-AAATCA-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATCGCGCCCTTTGGCATTCCGAAGGGCATGCCTGTTCGAGCGTCA-ACACCACTCAAGCCTGGCTTGGTAT-TGGGCG-T----CC--GCC-TCAAT-TTCT-CCGGCTGGACGC-GTA-TCTCAGCGTTGTGGT-TTCGCT-G-GC-GGGCCG Degelia_plumbea_II CCGAGTGAGGGCCT--CGGGTCC---------A---CCTC-------CAACCCTTTGTTGACC---TG-TTGCCTCGGGGGC-CGACGC-----CCCC-CGACGGACC--A-AACCCTGTGT-CGTCGGAGTACT-AAATCA-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATCGCGCCCTTTGGCATTCCGAAGGGCATGCCTGTTCGAGCGTCA-ACACCACTCAAGCCTGGCTTGGTAT-TGGGCG-T----CC--GCC-CCAAT-TTCT-CCGGCTGGACGC-GTA-TCTCAGCGTTGTGGT-TTCGCT-G-GC-GGGCCG Degelia_plumbea_III CCGAGTGAGGGCCT--TGGGTCC---------A---CCTC-------CAACCCTTTGTTGACC---TG-TTGCCTCGGGGGC-CGACGC-----CCCC-CGACGGACC--A-AACCCTGTGT-CGTCGGAGTACT-AAATCA-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATCGCGCCCTTTGGCATTCCGAAGGGCATGCCTGTTCGAGCGTCA-ACACCACTCAAGCCTGGCTTGGTAT-TGGGCG-T----CC--GCC-TCAAT-TTCT-CCGGCTGGACGC-GTA-TCTCAGCGTTGTGGT-TTCGCT-G-GC-GGGCCG Degeliella_rosulata CCGAGAGTGGAGCC--TGGCTCC-G-GG-CGAACCGCCC-A-ACTCTTTACCCCGTGGGAGCT--CCG-GTGTTCTGGCGGT------------CCGC-CCATGACC-----AACCGTGTAACCGTCCGAGGAAA-TAATTA-AAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCA-GCAGCTTTCAAGCCTCGCTTGGTGT-TGGGTT-C--GGCG-AGCCCTCAAA-ATCA-GTGGCAGTCCGG-GAC-TTCAAGCGCAGCAGC-CTCGCT-TGG-GCCGCCA Degeliella_versicolor CCGAGAGTGGAGCT--CAGCTCC-G-GG-TTAACCGCCC-A-GCTCTTCACCCTGTGGGTATC--CTG-GTGTTTTGGGGGT------------CCGC-CCGAAATCA----AACCCTGTAATTGTCCGAGGTAC-TAACGGTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATCCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCCTGGCATTCCGGGGGGCATGCCTGTTCGAGCGTCATGCTCCCCTCAAGCTCTGCTTGGTCT-TGGGCC-C--GGCG-GGCCT-CAAA-TGGA-GCGGCGGTCCGG-GAC-TTCACGCGCAGCAGC-TTCGCG-TTGGCCTGCCG Fuscoderma_amphibolum CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CCCCTGCCCCG-CCTCTTCACCCATTGTGGACC--CCG-TTGCTTTGGCGAG-------CCG--CCGC-CGGAGACCC--A-ATTGCCGTGCTTTTCCGAGCCCC-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGCATTCCGGGGGGCATACCTGTCCGAGCGTCATGCTCCCTTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGCGGGGCGGC-CGCGAGCGTAGTGAC-TTCGCT-CGG-GGCGCCA Fuscoderma_applanatum_I CCGAGAGTGGAGCC--TGGCTCC-GGGGCTCCGCCGCCCCG-CCTCTTCACCCATTGTGGACC--CCG-TTGCTTTGGCGAG-------CCG--CCGC-CGGAGACCC--A-ATTGCCATGTTTTTCCGAGCCCC-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCAGCGTGGCGAC-CGCGAGCGTAGTGAC-TTCGCT-CGG-GGCGCCA Fuscoderma_applanatum_II CCGAGAGTGGAGCC--TGGCTCC-GGGGCCCCGCCGCCCCG-CCTCTTCACCCATTGTGGACC--CCG-TTGCTTTGGCGAG-------CCG--CCGC-CGGAGACCC--A-ATTGCCATGTTTTTCCGAGCCCC-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAACCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCAGCGTGGCGAC-CGCGAGCGTAGTGAC-TTCGCT-CGG-GGCGCCA Fuscopannaria_ahlneri TCGAGAGTGGAGCC--GAGCTCCAGGGGC-TAACCGCCCCG-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGAG------------TCGT-CAGAGGCCC--G-AACGCTGTTTTGGTCTGAGTACG-CAATCATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-T--GGCG-GCCCC-GAAAA-ACAG-TGGCGGTGTAGCAGC-TGCGAGCGTAGTAGC-CCCGCT-CCG-CCCGCCA Fuscopannaria_cheiroloba TCGAGAGTGGAGCC--GAGCTCCAGGGGC-CAACCGCCCCG-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGAA------------TCGC-CAGAGACCC--C-AACGCTGTTTTGGTCCGAGTACG-CAATTATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-T--GGCG-GCCCC-GAAAA-ACAG-TGGCAGTGTAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCCGCCA Fuscopannaria_sorediata TCGAGAGTGGAGCC--GAGCTCCAGGGGC-TAACCGCCCCG-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGAG------------TCGT-CGGAGGCCC--G-AACGCTGTTTTGGTCTGAGTACG-CAATTATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCGGTGTAGCAGC-TGCGAGCGTAGTAGC-CCCGCT-CCG-CCCGCCA Fuscopannaria_ignobilis TCGAGAGTGGAGCC--TGGCTCC-GGGGC-TAACCGCCCCG-ACTCTTCACCCATTGCGGACT--CTG-TTGCTTTGGCGGA------------CCGT-CAGAGGCCA----GACGCTGTTTTGGTCTGAGTGAA-CAATCATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATGCACCTCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCAGTGGAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCTGCCA Fuscopannaria_pacifica_II TCGAGAGTGGAGCC--TGGCTCCAGGGGC-CAACCGCCCCC-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGACGAA------------TCGT-CCGAGGCCC--C-AACGCTGTTTCGGTCTGAGTGAA-CAATTATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCGGCGGAGCAGC-TGCGAGCGTAGTAGT-ACCGCT-CCG-CCTGCCA Fuscopannaria_leucosticta TCGAGAGTGGAGCC--GAGCTCCAGGGGC-CAACCGCCCCG-ACTCTTCACCCTTTGTGGACT--CTG-TTGCTTTGGCGAG------------TCGT-CAGAGGCCC--C-AACGCTGTTTTGGTCTGAGTACG-CAATAATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCAGTGTAGCAGC-TGCGAGCGTAGTAGC-CCCGCT-CCG-CCCGCCA Fuscopannaria_leucostictoides CCGAGAGTGGAGCC--CCGCTCCAGGGGC-CAACCGCCCCC-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGACGGA------------CCGT-CAGAGGCCC--A-TATTCTGTTTTGGTCTGAGTGAA-CAATAAGAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCAAGGGGCATACCTGTCCGAGCGTCATGCAACCCTCAAGCTTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCGGCGGGGCAGC-TGCGAGCGTAGTAGT-CTTGCT-CCG-CCCGCCA Fuscopannaria_maritima TCGAGAGTGGAGCC--TGGCTCCAGGGGC-CAACCGCCCCC-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGACGAA------------TCGT-CCGAGGCCC-CC-AACGCTGTGTTGGTCTGAGTGAA-CAATTGTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCC-GCCCC-GAAAA-ACAG-TGGCAGCGGAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCTGCCA Fuscopannaria_olivacea TCGAGAGTGGAGCC--TGACTCC-GGGGC-TAACCGCCCCG-ACTCTTCACCCCTTGTGAACT--CTG-TTGCTTTGACAGA------------CCGT-CAGAGGCCA----AACGCTGTTTTGGTCTGAGTGAA-CAATTATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCAGTGGAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCTGCCA Fuscopannaria_pacifica_I TCGAGAGTGGAGCC--TGGCTCCAGGGGC-CAACCGCCCCC-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGACGAA------------TCGT-CCGAGGCCC--C-AACGCTGTTTCGGTCTGAGTGAA-CAATTATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCGGCGGAGCAGC-TGCGAGCGTAGTAGT-ACCGCT-CCG-CCTGCCA Fuscopannaria_praetermissa TCGAGAGTGGAGCC--GAGCTCCAGGGGC-CAACCGCCCCG-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGAA------------TCGC-CAGAGACCC--C-AACGCTGTTTTGGTCCGAGTACG-CAATTATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCAGTGTAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCCGCCA Fuscopannaria_protensa TCGAGAGTGGAGCC--GAGCTCCAGGGGC-TAACCGCCCCG-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGAG------------TCGT-CAGAGGCCC--G-AACGCTGTTTTGGTCTGAGTACG-CAATCATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCACCCCTCAAGCCTGGCTTGGTC-TTGGGCG-T--GGCG-GCCCC-GAAAA-ACAG-TGGCGGTGTAGCAGC-TGCGAGCGTAGTAGC-CCCGCT-CCG-CCCGCCA Fuscopannaria_sampaiana_I CCGAGAGTGAAGCCCCCGGCTTC-GGGG-CCAACCGCCCCG-ACTCTTCACCCAGTGCCGACG--TTG-TTGCTTTGGCGGG-----------GTCGC-CGAAGACCC--G-AACGCTGTTTCGGTCTGAGTGGATAAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCACGCCTAGCGTGGTC-TTGGGTG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCGGCGTAGCGGC-TGCGAGCGTAGTATTATTCGCT-CTG-CGCGCCA Fuscopannaria_sampaiana_II CCGAGAGTGAAGCCCCCGGCTTC-GGGG-GCAAACGCCCCGAACTCTTCACCCAGTGCCGACG--TTG-TTGCTTTGGCGGG-----------GTCGC-CGAAGACCC--G-AACGCTGTTTCGGTCTGAGTGGATAAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCACGCCTAGCGTGGTC-TTGGGTG-C--GGCG-GCCCC-GAAAA-ACAG-TGGCGGCGTAGCGGC-TGCGAGCGTAGTATTATTCGCT-CTG-CGCGCCA Joergensenia_cephalodina_I CCGAG-GCGGAGCC--AGTCTCC-GGGG-GCAA--CCCCTA-ACTCCGCATCCCGTGGGGCTG--AAGCGTGTCTGGGCGGG------------CCGC-CCGCAACGTC---AACGCTGCAATCGTCCGAGGAAC-CAATCGGAAAA-TTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGACTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTCCGAGCGTCATGCTCCCTTCAAGCG-GGCTTGGTGT-TGGGT--C--GGCG-GGCCC-CAAA-CGCA-GTGGCGGTCCGG-GGC-TTCAAGCGCAACAGC-TTCGCT-TCCG-CTGCCA Joergensenia_cephalodina_II CCGAG-GCGGAGCC--AGTCTCC-GGGG-GCAA--CCCCTA-ACTCCGCATCCCGTGGGGCTG--AAGCGTGTCTGGGCGGG------------CCGC-CCGCAACGTC---AACGCTGCAATCGTCCGAGGAAC-CAATCGGAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGACTTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTCCGAGCGTCATGCTCCCTTCAAGCG-GGCTTGGTGT-TGGGT--C--GGCG-GGCCC-CAAA-CGCA-GTGGCGGTCCGG-GGC-TTCAAGCGCAACAGC-TTCGCT-TCCG-CTGCCA Leciophysma_finmarkicum TCGAGAGTGGAGCC--TAGCTCC-GGGGC-CAACCGCCCCA-ACTCTTCACCCATTGTGAACG--GTG-TTGCTTTGGCGAG------------TCGC-CAGAGACCT--T--ATACTGTTTTAGTCTGAGTGTA-TAATTAAAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATATCTGTTCGAGCGTCATGCTC-CCTCAAGCCTGGCTTGGTC-TTGGGCG-T--GGCG-GCCCT-GAAAA-CCAG-TGGCAGCGCAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCCGCCA Leciophysma_furfurascens CCGAGAGTGGAGCC--TAGCTCC-GGGGC-CAACCGCCCCA-ACTCTTCACCCACTGTAAACG--TTG-TTGCTTTGGCGAG------------TCGC-CAGAGACCT--T-CTTGCTGTAATGGTCTGAGTGTA-GAATTATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATATCTGTTCGAGCGTCATGCTC-CCTCAAGCTTGGCTTGGTC-TTGGGTG-C--AGCG-GCCCC-GAAAA-TCAG-TGGCAGTGCGGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCCGCCA Moelleropsis_nebulosa_I TCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGGA------------CCGC-CAGAGGCCA--A-AACGCTGTTTTGGTCTGAGTGAA-CAATCATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATGCACCTCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCTCC-GAAAA-ACAG-TGGCAGTGGAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCTGCCA Moelleropsis_nebulosa_II TCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGGA------------CCGC-CAGAGGCCA--A-AACGCTGTTTTGGTCTGAGTGAA-CAATCATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATGCACCTCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCTCC-GAAAA-ACAG-TGGCAGTGGAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCTGCCA Moelleropsis_nebulosa_III TCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-ACTCTTCACCCATTGTGAACT--CTG-TTGCTTTGGCGGA------------CCGC-CAGAGGCCA--A-AACGCTGTTTTGGTCTGAGTGAA-CAATCATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATGCACCTCTCAAGCCTGGCTTGGTC-TTGGGCG-C--GGCG-GCTCC-GAAAA-ACAG-TGGCAGTGGAGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCTGCCA Pannaria_athroophylla_I TCGAGAGTGGAGTT--CGTCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCGTTGTGGATG--CTG-TTGCTTTGGCGGA------------CCGC-CGGAGGCTT----AACGCTGTTCCGGTCGGAGTGAC-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTCCGAGCGTCATGCTCACTTCAAGCGTCGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGGCC-GCGGGCGTGTACAA-ATCGCT-CCG-GCTGCCA Pannaria_athroophylla_II TCGAGAGTGGAGTT--CGTCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCGTTGTGGATG--CTG-TTGCTTTGGCGGA------------CCGC-CGGAGGCTT----AACGCTGTTCCGGTCGGAGTGAC-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTCCGAGCGTCATGCTCACTTCAAGCGTCGCTTGGTCTTTGGGCG-C---GCG-GCCCC-GAAAAAGCAATTGGCGGTGCGGTGGCCCGCGGCCGTTGTACC-ATCGCTTCCG-ACTGCCA Pannaria_calophylla CCGAGAGTGGGGCT--CGTCTCC-GGGG-CTAACCGCCCCG-ACTCTTCATCCGGTGTGGATG--CTG-TTGCTTTGGCGAG------------CCGC-CAGAGGCTG----AACGCTGTTATCGTCGGAGTGAT-CAATAGAAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATACCTGTTCGAGCGTCATGCTCACTTCAAGCGAAGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGGC-CGCGAGCGTAGTAAA-GTCGTT-CTG-GCTGCCA Pannaria_contorta CCGAGAGTGGAGTT--CGTCTCC-GGGG-CTAACCGTCCCG-ACTCTTCACCCGCTGTGGACG--TTG-TTGCTTTGGCGAG------------CCGC-CAGAGGCTT----AACGCTGTTCCGGTCGGAGTGAT-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTTATGCTCACTTCAAGCTTCGCTTGGTT-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGGC-CGCGAGCGTAGTAAA-TTCGCT-CCG-GCTGCCA Pannaria_dichroa CCGAGAGTGGAGCC--TGGCTCC-GGGGC-TAACCGCCCCA-CCTCTTCACCCA-TGTGAATA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGACCC--A-ATTGTTGTGCTCATCAGAGTGGA-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCCTCGCTTGGTC-TTGGGCG-T---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-TTCGCC-CCG-CCCGCCA Pannaria_farinosa CTGAGAGTGGAGCT--CGCCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCGTTGTGGATA---TG-TTGCTTTGGCGGC------------CCGC-CGGGGGTT-----AACGCTGTTACGGTCGGAGTGAT-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCACTTCAAGCATGGCTTGGTC-TTGGGCG-C--AGCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGGC-CGCGAGCGTAGTAAA-ACCGCT-CCG-GCTGCCA Pannaria_hispidula TCGAGAGTGGAGTT--CGACTCC-GGGG-CCAACCGCCCCG-ACTCTTCACCCGGTGCGGATA--TTG-TTGCTTTGGCGGG------------TCGC-CAGGGATCG----CACGCTGTCTTGGTCCGAGCGAAAGAATTGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATTCCGAGGGGCATACCTGTCCGAGCGTTATGCTCACTTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCT-GAAAC-GCAG-TGGCGGTTCGGTGGC-CGCGAGCGTAGTAGT-TCCGCT-CCG-GCTGCCA Pannaria_hookeri TTGAGAGTGGAGTT--CGTCTCC-GGAG-TTAACCGCTCCG-ACTCTTCACCCGTTGTGGACG--CTG-TTGCTCTGGCGGG------------CCGC-CAGAGGCCT----AACGCTGTTCCGGTCGGAGCGAC-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTCGGTATTCCGAGGGGCATACCTGTCCGAGCGTCATGCTCCCTTCAAGCTTTGCTTGGTC-TTGGGCG-T---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGCCCCGCGAGCGTAGTAAT-ATCGCT-CCG-GCTGCCA Pannaria_insularis CCGAGAGTGGAGCT--CGTCTCCGGGGG-CTAACCGCCCCG-ACTCTTCACCCCGTGTGGACGTTCTG-TTGCTTTGGCGGC------------CCGC-CGGAGGCCC----TACGCTGTTCTGGTCGGAGTGAA-TAATTGGAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCTTTGGCATTCCGAGGGGCATACCTGTCCGAGCGTCATGCTCCATTCAAGCCGAGCTTGGTC-TTGGGCG-C--AGCG-GCCCC-GAAAC-GCAG-TGGCGGTGCGGTGGCCCGCGAGCGTAGTGAC-ACCGCT-CCG-GCCGCCA Pannaria_isabellina ACGAGAGTGGAGTC--ACGCTCC-GGGG-TTAACCGCCCCG-ACTCTTCACCCAGTGTCGACT--CAG-TTGCTTTGGCGGG------------TCGC-CAAAGGTTT----AACGCCGTTTTCGTCGGAGTGAA-GAATAACAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCATTTCAAGCTTCGCTTGGTC-TTGGGTG-C---GCG-GGCCC-GAAAA-GCAG-TGGCGGTACGGTGGC-CGCGAGCGTAGCAGT-TCCGCT-CTG-GCTGCCA Pannaria_microphyllizans TCGAGAGGGAGGCT--CGCCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCTTTGTGGACA--TTG-TTGCTTCCCCCGA------------CCTCGGGGTGGCTA----AACGCTGTTCCGGTCGGAGTGAT-TAATTATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATACCTGTTCGAGCGTCATGCTCCCTTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-ACAA-TGGCGGTGCGGTGGC-CGCGAGCGTAGTAAA-ACCGCT-CCG-GCTGCCA Pannaria_multifida TCGAGAGTGGAGCT--CGTCTCCCGGGGCCTTGCCGCCCCG-ACTCTTCACCCCGTGCATACG-GCAG-TTGCTTTGGCGGC------------CCGC-CGGAGGTCG-A--AACGCTGTTTCGGTCGGAGTGAC-CAATTGGAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATTCCGAAGGGCATACCTGTTCGAGCGTCATGCTCCCTTCAAGCCCGGCTTGGTG-TTGGGCG-C--AACG-GCCCC-GAAAG-GCAG-TGGCGGTGCGGTGGCCCGCGAGCGTAGTACA-ACCGCT-CCG-GCCGCCA Pannaria_pallida CCGAGAGTGGAGCT--CGTCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCGCTGTGGACG--CTG-TTGCTTTGGCGGA------------CCGC-CAAAGGCTT-----ACGCTGTTAAAGTCCGAGTCAT-CAATAGCAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCACTTCAAGCTTCGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGGC-CGCGAGCGTAGTAAA-ATCGCT-CCG-GCTGCCA Pannaria_rubiginella_I CCGAGAGGGGAGCT--TGTCTCC-GGGG-CCAACCGCCCCG-ACTCTTCACCCGTTGCGGAAC--TGG-TTACTCTGGCGGC------------TCGC-CGGGGGCTC----AACGCTGGTTCCGTCGGAGTGAC-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTCGGCATTCCGAGGGGCATACCTGTCCGAGCGTCATGCCCCCCTCAAGCTCCGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGCCCCGGGAGCGTAGTGAA-CTCGTT-CCG-GCGGCCA Pannaria_rubiginosa TCGAGAGGGGAGCT--TGTCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCGATGTGAAAT--CTA-TTGCTTTGGCGGC------------CCGC-CGGGGGTCG----AACGCTGTCACGGTCGGAGTGAT-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTCCGAGCGTCATGCTCCCTTCAAGCTTCGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGCGCCCCGGGAACGTAGTAAT-ATCGTT-CCGTACCGCCA Pannaria_sphinctrina TCGAGAGGGAGGCT--CGCCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCTTTGTGGACA--TTG-TTGCTTCCCCCGA------------CCTCGGGGTGGCTA----AACGCTGTTCCGGTCGGAGTGAT-TAATTATAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAAGGGCATACCTGTTCGAGCGTCATGCTCCCTTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-ACAG-TGGCGGTGCGGTGGC-CGCGAGCGTAGTAAA-ACCGCT-CCG-GCTGCCA Pannaria_subfusca TCGAGAGGGGAGCT--CGTCTCC-GGGG-CTAACCGCCCCG-ACTCTTCACCCGTTGTGGAAT--CTG-TTGCTTTGGCGGC------------CCGC-CGGGGGCCG----AACGCTGTGACGGTCGGAGTGAT-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTCCGAGCGTCATGCTCACTTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGTGCCCCGGGAACGTAGTAAT-ATCGTT-CCG-GCGGCCA Pannaria_tavaresii TCGAGAGGGGAGCT--TGTCTTC-GGGG-CTAACCGCCCCG-ACTCTTCACCCATTGTGGATT--TTG-TTGCTCTGGCGGC------------CCGC-CGGGGGCCG----AACGCTGTAACGGTCGGAGTGAT-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCCTTGGCATTCCGAGGGGCATATCTGTCCGAGCGTCATGCTCCCTTCAAGCTTCGCTTGGTC-TTGGGCG-C---GCG-GCCCC-GAAAA-GCAG-TGGCGGTGCGGCGCCCCGGGAACGTAGTAAT-ATCGTT-CCG-ACCGCCA Parmeliella_appalachensis CCGAGAGTGGGGCT--CGGCCCC--GGG-CGACCTGCCC-G-ACTCTTCACCCG-TGTGGACA--CCG-TCGTTTTGGCGGGG---------G-CCGT-CAGGAGCGCT---AAACCTGAAATCGTCCGAGGAAA-CAATCGTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCA-GCCTTCCTCAAGCCGGGCTTGGTTT-TGAGCT-C--GGCG-GGCCC-GAAA-AGCA-GTGGCGGTCCGG-GAC-TTCAAGCGTGGTAGG-TTCGCT-CC-CACCGCCA Parmeliella_incrassata CCGAGAGTGGAGCC--TGGCTCC-GGGGC-TAACCGCCCCA-CCTCTTCACCCA-TGTTAACA--CCG-TTGCTTTGGCGAG------------TCGC-CGAAGGTCT--A-TATGCTGTTTTGATCCGAGTAAT-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCCTGGCTTGGTT-TTGGGCC-T---GCG-GGCTC-GAAAA-ACAG-TGGCGGCGCGGTGAT-CGCGAGCGTAGTACA-CTCGCT-CCG-CCCGCCA Parmeliella_lacerata CCGAGAGTGGAGCC--TA?CTCC-GGGGC-TAACCGCCCCG-ACTCTTCACCCG-TGTGGACA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGGTTT--A-ATCGCCGTTTTTATCTGAGGAAC-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATATTGCGCCCTTCGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCCCCTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTTCGGCGGC-CGCGAGCGTAGTGAT-CTCGCT-CGA-GGCGCCA Parmeliella_nigrocincta CCGAGAGAGGAGCC--TGGCTCC--GGG-CTAACCGCCC-A-CCTCTTCACCCTGTGCGAAGC--CTG-TCGTTTTGGCGGG----------G-CCGT-CAGAGTCCA---CAACCCTGAAATTGTCCGAGGCAT-CAATCGTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAATAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTCACATCTCAAGCCTGGCTTGGTCT-TGGGCC-C--GGCA-TGCCC-CGAA-CGTA-GTGGCGGTCCGG-GAC-TTCAAGCGCGGTAGA-TTCGCT-TCCGACCGCCA Parmeliella_pannosa CCGAGAGTGGGGCT--TGGCCCC--GGG-GTTACCGCCC-G-ACTCTTCACCCG-TGCGGACA--CCG-TCGCTTTGGCGGG------------CCGC-CAGAAGCGC--CTAACCCCAAAATCGTCCGAGGAAA-CAACCGTAAAACTTTCAACAACGGATCTCTTGGTTCCGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCA-GCGCTCCTCAAGCCCGGCTTGGTGT-TGGGCT-C--GGTG-GGCCC-GGAA-AGCA-GTGGCGGTCCGG-GGC-CTCGAGCGTGATAGA-GTCGCTTCC-GACTGCCA Parmeliella_cf._thysanota CCGAGAGCGGAGCG--TAGCTCC--GGG-CTAACCGCCC-A-ACTCTTCACCCTGTGCGGATC--CTG-TCGTTTTGGCGGGG---------G-CCGC-CAGAGTCCA----AACCCCGAATTCGTCCGAGTAAC-GAATCGTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATACGCACCTCAAGCCCGGCTTGGTGA-TGAGCC-C--GGCG-GGCCC-GAAA-AGCA-GTGGCAGTCCAG-GAC-TTCAAGCGCGGTAGA-TTCGCT-TCCGACCGCCA Parmeliella_triptophylla_I TCGAGAGTGGAGCA--TAGCTCC--GGG-CTAACCGCCC-G-ACTCTTCACCCCGTGCGGAGC--CCG-TCGTTTTGGCGAGG---------G-CCGC-CAGAGTCCA----AACTCTGAAATCGTCCGAGGAAC-CAACCGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATACCCCTCTCAAGCCCGGCTTGGTGT-TGGGCC-CC-GGCG-AGCCC-GGAA-AGCA-GTGGCGGTCCGG-GAC-TTCGAGCGCGGTAGA-TTCGCT-TCCGACCGCCA Parmeliella_triptophylla_II TCGAGAGTGGAGCA--TAGCTCC--GGG-CCAACCGCCC-G-ACTCTTCACCCCGTGCGGAGC--CCG-TCGTTTTGGCGAGG---------G-CCGC-CAGAGTCCA----AACTCTGAAATCGTCCGAGGAAC-CAACCGCAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATACCCCTCTCAAGCCCGGCTTGGTGT-TGGGCC-CC-GGCG-AGCCC-GGAA-AGCA-GTGGCGGTCCGG-GAC-TTCGAGCGCGGTAGA-TTCGCT-TCCGACCGCCA Physma_radians CCGAGAGGGGGGCG-------------A-TTA-GCCCTC-A-ACTCTTCATTCAGTGTAGACC--C-G-TTGCTTCGGCGAG------------GAGC-GAGGGACGG----ACCGCCGGAATATTATTATTAAA-GATTT-GAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGCATTCCGAAGGGCATACCTGTTCGAGCGTCATGCTCCTTTTCCGGCGGGTTAAGTCT-TGGGCG-T-GAACG-AGCCC-CAAA-CCTA-TAGGCGGTGTGG-TCC-CGCGAGCGTAGTTAAACACGCT-GCG--CCGCCC Protopannaria_pezizoides_I CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCG-ACTCTTCACCCTGTGTCAACC--CCG-TTGCTTTGGCGAG------------TCGC-CGAAGACCA--T-ATTTCTGTGTCAGTCTGAGTAAC-CAATTAAAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCACGCGGCGCGTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-TCAG-TGGCGGCGCGGCCGC-GGCGAGCGTAGTAGT-CTCGCT-CGG-GTTGCCA Protopannaria_pezizoides_II CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCG-ACTCTTCACCCTGTGTCAACC--TCG-TTGCTTTGGCGAG------------TCGC-CGAAGACCA--T-ATTTCTGTGTCAGTCTGAGTAAT-CAATTAAAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCACGCGGCGCGTGGTC-TTGGGCG-C--GGCG-GCCCC-GAAAA-TCAG-TGGCGGTGCAGCCGC-GGCGAGCGTAGTAGT-CTCGCT-CGG-GTTGCCA Psoroma_aphthosum CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGAACA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGGCCC--A-AATTTACTGTTGATCTGAGCGCA-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCCTCGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAC-CTCGCT-CCG-CCCGCCA Psoroma_echinaceum CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGAACA--CCG-TTGCTTTGGCGCT------------TCGC-CAGAGGCCC--A-ATTGCCGTGTTGATCTGAGGAAC-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCCCCTCAAGCCGTGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAC-CTCGCT-CCG-CCCGCCA Psoroma_fruticulosum CCGAGAGTGAAGCC--TGGCTTC-GGGGC-CAACCGCCCCA-CCTCTTCGCCCC-TGTGGATA--CCG-TTGCTTTGGCGGG------------TCGC-CAGAGACCT--A-ATTGCTGTGTTAATCTGAGTAAC-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTTA-GCTCCCCTCAAGCCTAGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-TTCGCT-CCG-TCCGCCA Psoroma_hypnorum_I CCGAGAGTGGAGCC--TGGCTCC-GGGGC-TAACCGCCCCA-CCTCTTCACCCG-TGTGGACA--CCG-TTGCTTTGGCGGG------------TCGC-CAGAGGCCC--A-ATTGCTGTGTTAATCTGAGTCAA-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCCCTTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAC-TTCGCT-CCG-CCCGCCA Psoroma_hypnorum_II CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGGACA--CCG-TTGCTTTGGCGGG------------TCGC-CAGAGATTT--C-ATTTCTGTGTTAATCTGAGTCAA-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTTA-GCTCCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-TTCGCT-CCG-TCCGCCA Psoroma_hypnorum_III CCGAGAGTGGAGCT--TGGCTCC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGGATA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGACCC--A-ATTGCTGTGTTGATCTGAGTAAA-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-TTCGCT-CCG-CCCGCCA Psoroma_hypnorum_IV CCGAGAGTGGAGCC--TGGCTCC-GGGGC-TACCCGCCCCA-CCTCTTTACCCA-TGTGGATA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGGTTC--A-ATTGCCGTGTCGATCAGAGTCCA-TAATCGAAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAC-TTCGCT-CCG-CCCGCCA Psoroma_hypnorum_V CCGAGAGTGGAGCT--TGGCTCC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGGATA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGACCC--A-ATTGCTGTGTTGATCTGAGTAAA-TGATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTTA-GCTCACCTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-TTCGCT-CCG-CCCGCCA Psoroma_paleaceum CCGAGAGTGGAGCT--TGGCTCC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGGATA--CCG-TTGCTTTGGCGGG------------TCGC-CAGAGACCT--A-ATTGCTGTGTTAATCTGAGTCAA-CAATAGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCCCCTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGATGCGGTAAC-CGCGAGCGTAGTAAC-TTCGCT-CCG-TCCGCCA Psoroma_saccharatum CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-TCTCTTCACCCA-TGTGGACA--CCG-TTGCTTTGGCGAG------------CCGC-CAGAGACTC--A-ATTGCCGTCTTTATCTGAGTAAG-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCCTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-TTCGCT-CCG-CCCGCCA Psoroma_tenue CCGAGAGTGAAGCC--TGGCTTC-GGGGC-CAACCGCCCCA-CCTCTTCACCCA-TGTGGACA--CCG-TTGCTTTGGCGAG------------TCGC-CAGAGACCC--A-ATTGTCATTTTTATCCGAGCAAA-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCTTGGCTTGGTC-TTGGGCG-C---GCG-GGCCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGGCAGCGTAGTAAT-CTCGCT-CGA-CCCGCCA Psorophorus_fuegiensis CCGAGAGTGGAGCC--TAGCTCC-GGGGC-TAACCGCCCCG-CCTCTTCACCCG-TGCAGACA--CTG-TTGCTTTGGCGAG------------TCGC-CAGAGGCTC--A-AT-TATATTATTATCTGAGGAAC-AAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTC-ATTCAAGCCTGGCTTGGTC-TTGGGCC-C---GCA-GGCCT-GAAAA-ACAG-TGGCGGTGTGGCGAC-CGCGAGCGTAGCGAT-CTCGCT-CGA-CCCGCCA Psorophorus_pholidotus CCGAGAGTGGAGCC--TAGCTCC-GGGGC-TAACCGCCCCG-CCTCTTCACCCG-TGCAGACA--CTG-TTGCTTTGGCGAG------------TCGC-CAGAGGCTC--A-ATCTATATTATTATCTGAGGAAC-AAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTC-ATTCAAGCCTGGCTTGGTC-TTGGGCC-C---GCA-GGCCT-GAAAA-ACAG-TGGCGGTGTGGCGAC-CGCGAGCGTAGCGAT-CTCGCT-CGA-CCCGCCA Santessoniella_arctophila CCGAGAGTAGAGCC--TAGCTCT-GGGGC-CAACCGCCCCA-CCTCTTTACCCA-TGTGGACA--TCG-TTGCTTTGGCGAG------------TCGC-CAGAGACCT--A-ATTGTCATTTTCATCTGAGCAAA-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCCTGGCTTGGTC-TTGGGCA-C---GCG-GGTCC-GAAAA-ACAG-TGGCGGTGCGGCGAC-CGGCAGCGTAGTAAT-CTCGTT-CGA-CCCGCCA Santessoniella_sp. CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCG-ACTCTTCACCCATTGTGAACC--CCG-TTGCTTTGGCGAG------------TCGC-CAAAGACCG--T-CACGCTGTGTTTGTCTGAGTACC-CAATAAAAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCACGTCTGGCGTGGTC-TTGGGCG-T--GGCG-GCCCC-GAAAA-TCAG-TGGCGGCGTGGCAGC-GGCGAGCGTAGTAGTCCCCGCT-CGG-TCTGCCA Santessoniella_grisea TCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCG-ACTCTTCACCCGTTGTGCACC--TCG-TTGCTTTGGCGAG------------TCGC-CAAAGACCA--C-CATTCAGTGTCAGTCTGAGTTAC-CAATGAAAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCCCCTCACGCCTGGCGTGGTC-TTGGGCG-C--AGCG-GCCCC-GAAAA-TCAG-TGGCGGCGCGGCCGC-AGCGAGCGTAGTAGC-CCCGCT-CTG-GTTGCCA Santessoniella_polychidioides CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CACCCGCCCCA-CCTCTTCACCCG-TGTGAACA--CCG-TTGCTTTGGCGAG------------TCGC-CGGAGGCCC--A-AACTTATTGTTGATCTGAGCGCA-TAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCA-GCTCACCTCAAGCTTCGCTTGGTC-TTGGGCG-C---GCGCGGTCC-GAAAA-ACAG-TGGCGGTGCGGTGAC-CGCGAGCGTAGTAAT-CTCGCT-CCG-CCCGCCA Santessoniella_saximontana CCGAGAGTGGAGCC--TGGCTCC-GGGGC-CAACCGCCCCA-ACTCTTTACCCACTGTAAACG--TTG-TTGCTTTGGCGAG------------TCGC-CAGAGACCT--T-CTTGCTGTAATGGTCTGAGTGTA-GAATTATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGCGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATATCTGTTCGAGCGTCATGCTC-CCTCAAGCTTGGCTTGGTC-TTGGGCG-C--AGCG-GCCCC-GAAAA-TCAG-TGGCAGTGCGGCAGC-TGCGAGCGTAGTAGT-CCCGCT-CCG-CCCGCCA Staurolemma_oculatum TCGAGAGTGGAGCT--TGGCTCC-GGGG-CAAACCGCCCTA-ACTCTTCACCAT-TGCGGACAA-CTG-TTGCCTTGGCGAG------------TCGC-CGATGGCAT--A-AACGCTGTTTCAGTCGGACTATA-CAATTTTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTCGGTATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCACCTCAAGCTTGGCTTGGTC-ATGGGCG-T---GCG-GGCCC-GAAAA-GCAG-TGGCGGTTCA-TAGC-TGCGAGCGTAGTAGT-TCCGCT-CTG-GGTGCCA Staurolemma_omphalarioides CCGAGAGTGGGGCT--CGGCCCC-GGGG-CAAACCGCCCCGTACTCTTCACCCATTGCGGACA--CTG-TTGCTTTGGCGAG------------TCGC-CAATGGCCC--A-AACGCTGTTTCAGTCGGAATCCA-CAATCGTAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTCGTGCTCCTCTCAAGCTTGGCTTGGTC-GTGGGCG-C---GCG-GGCCC-GAAAA-GCAG-TGGCGGTTCACCGGC-TGCGAGCGTAGTAGT-TCCGCT-CCG-AGTGCCA Vahliella_leucophaea CCGAGGGAGGAGCT--TGGCTCC-GGGG-CT--CGGCCC---AATTTGTACCCTGTGAAAACC--TGG-TTGCTTTGACAGG------------CCGT-CAGAGGCAC--A-AACCCCGATTTGTTCTGAACTGT-CAATA-CAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTTAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATACCTGTTCGAGCGTTA-ACCCCTCTCAAGCTAGGCTTGGTTC-TGGGTC-C---GTG-GGCC-TGTAA-TACA-GTGGTGGTCCGG-GAC-TTTCAGCGTAGTAAA-CCCGCT-GCC-ACTACCA Xanthopsoroma_contextum CCGAGAGAGGAGCT--T-GCTCC-GGGG-CTAACCGCCCCA-ACTCTTCACCCATTGTAAATC--TTG-TTGCTTTGGCGGG------------CCGT-CGGAGGCCG--A-AACGCTGTATAGGTCTGAGCAAT-TAATAATAAAACTTTCAACAACGGATCTCTTGGCTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCACCTCAAGCTCGGCTTGGTC-TTGGGCC-C---GCG-GGCCT-GAAAA-ACAG-CGGCGGTGCGGTGGC-TGCGAGCGTAGTAAG-TTCGCT-TGG-ACTGCTA Xanthopsoroma_soccatum CCGAGAGTGGAGCT--T-GCTCC-GGGG-CTAACCGCCCTA-ACTCTTCACCCGTTGTTAACC--TTG-TTGCTTTGGCGGG------------TCGC-CCGAGGCCG--A-AACTCTGTGTAGGTCGGAGCGAT-AAATAATAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGCATTCCGAGGGGCATACCTGTTCGAGCGTCATGCTCACCTCAAGCCTGGCTTGGTC-TTGGGCC-C---GCG-GGCCT-GAAAA-ACAG-TGGCGGCGCAGTGGC-TGCGAGCGTAGTAAG-CTCGCT-CGG-ACTGCCA ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 408; END; BEGIN TREES; Title 'Trees from "ITS_consensus.tre"'; LINK Taxa = Taxa; TRANSLATE 1 Degelia_atlantica_I, 2 Degelia_atlantica_II, 3 Degelia_cyanoloma, 4 Degelia_gayana_I, 5 Degelia_gayana_II, 6 Degelia_plumbea_I, 7 Degelia_plumbea_II, 8 Degelia_plumbea_III, 9 Degeliella_rosulata, 10 Degeliella_versicolor, 11 Fuscoderma_amphibolum, 12 Fuscoderma_applanatum_I, 13 Fuscoderma_applanatum_II, 14 Fuscopannaria_ahlneri, 15 Fuscopannaria_cheiroloba, 16 Fuscopannaria_sorediata, 17 Fuscopannaria_ignobilis, 18 Fuscopannaria_pacifica_II, 19 Fuscopannaria_leucosticta, 20 Fuscopannaria_leucostictoides, 21 Fuscopannaria_maritima, 22 Fuscopannaria_olivacea, 23 Fuscopannaria_pacifica_I, 24 Fuscopannaria_praetermissa, 25 Fuscopannaria_protensa, 26 Fuscopannaria_sampaiana_I, 27 Fuscopannaria_sampaiana_II, 28 Joergensenia_cephalodina_I, 29 Joergensenia_cephalodina_II, 30 Leciophysma_finmarkicum, 31 Leciophysma_furfurascens, 32 Moelleropsis_nebulosa_I, 33 Moelleropsis_nebulosa_II, 34 Moelleropsis_nebulosa_III, 35 Pannaria_athroophylla_I, 36 Pannaria_athroophylla_II, 37 Pannaria_calophylla, 38 Pannaria_contorta, 39 Pannaria_dichroa, 40 Pannaria_farinosa, 41 Pannaria_hispidula, 42 Pannaria_hookeri, 43 Pannaria_insularis, 44 Pannaria_isabellina, 45 Pannaria_microphyllizans, 46 Pannaria_multifida, 47 Pannaria_pallida, 48 Pannaria_rubiginella_I, 49 Pannaria_rubiginosa, 50 Pannaria_sphinctrina, 51 Pannaria_subfusca, 52 Pannaria_tavaresii, 53 Parmeliella_appalachensis, 54 Parmeliella_incrassata, 55 Parmeliella_lacerata, 56 Parmeliella_nigrocincta, 57 Parmeliella_pannosa, 58 Parmeliella_cf._thysanota, 59 Parmeliella_triptophylla_I, 60 Parmeliella_triptophylla_II, 61 Physma_radians, 62 Protopannaria_pezizoides_I, 63 Protopannaria_pezizoides_II, 64 Psoroma_aphthosum, 65 Psoroma_echinaceum, 66 Psoroma_fruticulosum, 67 Psoroma_hypnorum_I, 68 Psoroma_hypnorum_II, 69 Psoroma_hypnorum_III, 70 Psoroma_hypnorum_IV, 71 Psoroma_hypnorum_V, 72 Psoroma_paleaceum, 73 Psoroma_saccharatum, 74 Psoroma_tenue, 75 Psorophorus_fuegiensis, 76 Psorophorus_pholidotus, 77 Santessoniella_arctophila, 78 Santessoniella_sp., 79 Santessoniella_grisea, 80 Santessoniella_polychidioides, 81 Santessoniella_saximontana, 82 Staurolemma_oculatum, 83 Staurolemma_omphalarioides, 84 Vahliella_leucophaea, 85 Xanthopsoroma_contextum, 86 Xanthopsoroma_soccatum; TREE PB_ITS_majruleconsensus = (84:0.105062,((((53:0.058693,57:0.051609)0.57:0.033772,(2:0.004513,(1:0.002617,3:0.002667):0.004104)0.52:0.200431)1:0.047906,(((9:0.110721,10:0.105352)0.69:0.028753,(28:0.002695,29:0.002581)1:0.139216)0.98:0.069934,(58:0.043073,((59:0.003039,60:0.00478)0.98:0.035358,(56:0.051161,(4:0.155348,5:0.12722)1:0.646944)0.27:0.038919)0.08:0.010701)0.13:0.021041)0.36:0.034031)0.69:0.0975,((85:0.043445,86:0.026567)0.45:0.05032,((54:0.070574,((64:0.005708,80:0.023625)0.99:0.025379,(65:0.030548,((((39:0.03161,70:0.040004)0.4:0.010888,(69:0.002941,71:0.008328)0.84:0.008471)0.19:0.00785,(67:0.02021,(72:0.018144,(66:0.026956,68:0.017908)0.82:0.01073)0.76:0.010554)0.89:0.019169)0.19:0.00897,(73:0.021846,((74:0.014606,77:0.034757)0.96:0.016243,((11:0.033011,(12:0.004217,13:0.003673)0.87:0.00974)0.99:0.067223,(55:0.04332,(75:0.00288,76:0.002754)1:0.060491)0.85:0.026827)0.85:0.027046)0.87:0.020214)0.47:0.010068)0.29:0.010811)0.32:0.009751)0.34:0.014347)0.62:0.042504,(((82:0.045432,(83:0.042434,(7:0.006895,(6:0.00278,8:0.002821)0.56:0.005119)1:0.3849)0.34:0.024157)0.76:0.050876,((41:0.075745,44:0.082567)0.6:0.021629,(61:0.458914,((40:0.021047,(45:0.005101,50:0.002954)0.99:0.068648)0.29:0.011993,((43:0.050892,46:0.060843)0.88:0.04029,((48:0.082535,(51:0.005846,(49:0.017092,52:0.023757)0.96:0.019171)0.69:0.01415)0.99:0.043158,((42:0.05567,(35:0.013019,36:0.019206)0.98:0.017212)0.48:0.011552,(37:0.055148,(38:0.026237,47:0.026979)0.28:0.011245)0.32:0.013856)0.25:0.013212)0.29:0.011496)0.25:0.013613)0.57:0.059611)0.46:0.06004)0.36:0.03326)0.39:0.039774,(((30:0.023547,(31:0.005583,81:0.007703)0.99:0.037321)0.91:0.019651,((26:0.003351,27:0.00742)1:0.116358,(78:0.027948,(79:0.035275,(62:0.007042,63:0.012041)0.99:0.039349)0.97:0.028397)0.98:0.050079)0.75:0.025368)0.29:0.012427,(((15:0.00524,24:0.002661)0.97:0.009812,(19:0.011388,(16:0.005717,(14:0.002816,25:0.002661)0.98:0.008132)0.99:0.011645)0.91:0.00942)0.92:0.023059,((21:0.01646,(18:0.002648,23:0.002583)0.98:0.010134)0.66:0.006348,(20:0.059401,(22:0.01471,(17:0.013303,(33:0.005359,(32:0.002733,34:0.002805)0.33:0.002908)0.98:0.013081)0.86:0.011644)0.88:0.018896)0.39:0.009857)0.68:0.016899)0.86:0.037843)0.78:0.040228)0.15:0.019558)0.5:0.062684)0.67:0.101034)0.62:0.105062)[% ] [% ] [% setBetweenBits = selected ]; TREE PhyML_ITS_majruleconsensus = (84:0.17946744315,(((4:0.2912631968,5:0.2178056045):1.3544215797,(7:0.0090041474,(6:1.0E-10,8:1.0E-10)900:2.548E-7)1000:0.7228128528)1000:7.224533E-4,(((2:2.739E-7,(1:1.0E-10,3:1.605E-7)803:0.0042809152)1000:0.2911075837,((9:0.1832033588,(10:0.1787030075,(28:7.67E-8,29:1.0E-10)1000:0.2270718291)389:6.763E-7)854:0.0851231026,((53:0.0795421284,57:0.0963877425)921:0.0551979275,(58:0.0767306839,(56:0.1017512635,(59:1.102E-7,60:0.0042397786)1000:0.0497802004)387:0.0149881719)936:0.0467634448)479:0.0177769219)603:0.0288056141)766:0.0621766376,((85:0.058522931,86:0.0614982888)908:0.0681138234,((((26:1.109E-7,27:0.008490653)1000:0.1661190244,(82:0.0957174426,83:0.0502371724)991:0.0595255948)293:0.0280176842,((41:0.1103009722,44:0.1302908622)371:0.0184621821,((43:0.0708741125,46:0.0995091217)806:0.0352035063,((48:0.1223002105,(51:1.4602E-6,(49:0.0224503166,52:0.0301760427)795:0.0326025428)983:0.0247058945)770:0.0667370483,((40:0.0233213442,(45:0.0042473753,50:7.63E-8)1000:0.1251531929)529:0.0077081715,(37:0.0884788914,(47:0.0347006868,(38:0.0337762966,(42:0.0793696808,(35:0.0167251994,36:0.0269562618)1000:0.025121153)439:0.0120150713)245:0.0099101337)163:0.0017095442)195:0.0222183374)201:4.116E-7)263:0.0377135526)824:0.0695709374)399:0.026949028)184:0.0333696217,((61:0.7315516918,(((11:0.0417979868,(12:0.0042107564,13:1.754E-7)998:0.0148906153)1000:0.0755182834,(55:0.0466374665,(75:1.0E-10,76:1.082E-7)1000:0.0938834874)891:0.0459219021)484:0.0574821985,(54:0.1166473635,((67:0.0222043306,(72:0.0253913066,(66:0.0368242683,68:0.0192487164)657:0.0102380668)692:0.0083535521)675:0.0223908607,((73:0.0206671241,(74:0.0156925329,77:0.0530047227)976:0.0487639777)142:0.0119974175,((65:0.0353329041,(64:3.362E-7,80:0.0359907343)992:0.0402117913)350:0.0250057881,((39:0.0459653732,70:0.0561908631)217:0.0083777194,(69:1.6E-7,71:0.0086366212)990:0.006670154)229:0.006736358)79:0.0056545861)113:3.539E-6)375:8.803E-7)395:9.023E-7)851:0.0105556122)165:0.0414718664,((78:0.0381070541,(79:0.0547504485,(62:0.0053718274,63:0.0162519952)1000:0.0604308732)718:0.0317431313)968:0.0902923115,((30:0.0503107791,(31:0.0062907011,81:0.0065294645)998:0.0450286467)921:0.0400945923,(20:0.0973479552,(((15:0.0041508988,24:1.091E-7)995:0.0131839653,(19:0.0134947206,(16:0.0043053973,(14:1.0E-10,25:1.0E-10)960:0.0084677722)952:0.0133484763)524:0.0080466475)952:0.0337090933,((21:0.0223097406,(18:1.0E-10,23:1.0E-10)998:0.0125482264)976:0.0175425085,((17:0.0164180413,22:0.0248972118)438:0.0028427191,(33:0.0042231181,(32:1.0E-10,34:1.0E-10)752:1.645E-7)997:0.0176448308)836:0.0299466302)571:7.816E-7)410:0.0165178678)950:0.0518073057)543:9.344E-6)599:0.0696926115)71:0.0262313488)276:0.0495556019)413:0.0813487895)377:5.2516E-6)757:0.17946744315)[% ] [% ] [% setBetweenBits = selected ]; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 408; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 408; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1384444150643; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 7353415303767733752; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 8102759378242315590; mqVersion 275; checksumv 0 3 3273370052 null getNumChars 408 numChars 408 getNumTaxa 86 numTaxa 86 short true bits 15 states 15 sumSquaresStatesOnly 638154.0 sumSquares 638154.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1860 1120; setLocation 0 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.ManageTrees.ManageTrees; tell It; showTrees 0 #mesquite.lists.TreesList.TreesList; tell It; setTreeBlock 1; getWindow; tell It; newAssistant #mesquite.lists.NumForTreeList.NumForTreeList; tell It; suppress; setValueTask #mesquite.trees.NumberOfTaxa.NumberOfTaxa; desuppress; endTell; newAssistant #mesquite.lists.TreeListRooted.TreeListRooted; newAssistant #mesquite.lists.TreeListPolys.TreeListPolys; newAssistant #mesquite.lists.TreeListPolyAssumption.TreeListPolyAssumption; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1760 1053; setLocation 0 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #7353415303767733752 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1008.1384444049759.206209025114693111; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1760 1053; setLocation 0 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 2; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;