#NEXUS [written Mon Mar 31 13:20:37 CEST 2014 by Mesquite version 2.75 (build 564) at 2011-0788/141.35.167.202] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=57; TAXLABELS Akebia_trifoliata_AktPI Amborella_trichopoda_AmPI Antirrhinum_majus_GLO Aquilegia_vulgaris_AqvPI Arabidopsis_thaliana_PI 'Brassica napus BnPI-1' 'Brassica napus BnPI-2' 'Brassica napus BnPI-3' Camellia_japonica_CjGLO1 Camellia_japonica_CjGLO2 Chloranthus_spicatus_CsPI Chrysanthemum_grandiflorum_CDM86 Davidia_involucrata_DiGLO1 Davidia_involucrata_DiGLO2 Eschscholzia_californica_SEI Euptelea_pleiospermum_EUplPI Gerbera_hybrida_GGLO1 Gnetum_gnemon_GGM15 Gnetum_gnemon_GGM2 'Hedyosmum orientale HoPI_1' 'Hedyosmum orientale HoPI_1A' 'Hedyosmum orientale HoPI_1B' 'Hedyosmum orientale HoPI_2' 'Hedyosmum orientale HoPI_3' Impatiens_hawkeri_IhGLO Joinvillea_ascendens_JaPI 'Lacandonia schismatica Ls-PI' Lilium_longiflorum_LMADS8 Lilium_longiflorum_LMADS9 Lilium_regale_LRGLOA Lilium_regale_LRGLOB Liriodendron_tulipifera_LtPI Liriodendron_tulipifera_LtPI2 Medicago_truncatula_MtNGL9 Medicago_truncatula_MtPI Nicotiana_benthamiana_NbGLO1 Nicotiana_benthamiana_NbGLO2 Nuphar_advena_Nu.ad.PI1 Nuphar_advena_Nu.ad.PI2 Oncidium_Gower_Ramsey_OMADS8 Oryza_sativa_OsMADS2 Oryza_sativa_OsMADS4 Osmanthus_fragrans__OfGLO Pachysandra_terminalis_PAtePI 'Papaver somniferum PapsPI-1' 'Papaver somniferum PapsPI-2' Petunia_hybrida_PHGLO1 Petunia_hybrida_PHGLO2 Phalaenopsis_equestris_PeMADS6 Picea_abies_DAL11 Picea_abies_DAL12 Picea_abies_DAL13 Solanum_lycopersicum_TPI Taihangia_rupestris_TrPI Tulipa_gesneriana_TGGLO Vitis_vinifera_VviPI Zea_mays_ZMM16 ; END; BEGIN CHARACTERS; TITLE interactions; DIMENSIONS NCHAR=7; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1"; CHARSTATELABELS 1 'homodimerization Y2H+EMSA', 2 homodimerization_Y2H, 3 homodimerization_EMSA, 4 'heterodimerization with GLO partner Y2H+EMSA', 5 heterodimerization_with_GLO_partner_Y2H, 6 heterodimerization_with_GLO_partner_EMSA, 7 'heterodimerization with AGL6-LOFSEP-SEP3 partners Y2H+EMSA' ; MATRIX Akebia_trifoliata_AktPI 00-11-0 Amborella_trichopoda_AmPI 1011111 Antirrhinum_majus_GLO 0001110 Aquilegia_vulgaris_AqvPI 00-11-- Arabidopsis_thaliana_PI 0001111 'Brassica napus BnPI-1' ---11-- 'Brassica napus BnPI-2' ---11-- 'Brassica napus BnPI-3' ---11-- Camellia_japonica_CjGLO1 00-11-- Camellia_japonica_CjGLO2 00-11-- Chloranthus_spicatus_CsPI 11-11-- Chrysanthemum_grandiflorum_CDM86 00-11-1 Davidia_involucrata_DiGLO1 00-11-1 Davidia_involucrata_DiGLO2 00-11-1 Eschscholzia_californica_SEI 101111- Euptelea_pleiospermum_EUplPI 00-11-0 Gerbera_hybrida_GGLO1 00-11-0 Gnetum_gnemon_GGM15 000---- Gnetum_gnemon_GGM2 111---1 'Hedyosmum orientale HoPI_1' 00-11-- 'Hedyosmum orientale HoPI_1A' 11-11-- 'Hedyosmum orientale HoPI_1B' 00-11-- 'Hedyosmum orientale HoPI_2' 00-11-- 'Hedyosmum orientale HoPI_3' 11-11-- Impatiens_hawkeri_IhGLO ---11-- Joinvillea_ascendens_JaPI 1-1---- 'Lacandonia schismatica Ls-PI' 00-00-- Lilium_longiflorum_LMADS8 11111-- Lilium_longiflorum_LMADS9 11111-- Lilium_regale_LRGLOA 1-1---- Lilium_regale_LRGLOB 1-11-1- Liriodendron_tulipifera_LtPI 101111- Liriodendron_tulipifera_LtPI2 1011111 Medicago_truncatula_MtNGL9 00-11-- Medicago_truncatula_MtPI 11-11-- Nicotiana_benthamiana_NbGLO1 00-11-- Nicotiana_benthamiana_NbGLO2 00-11-- Nuphar_advena_Nu.ad.PI1 1011111 Nuphar_advena_Nu.ad.PI2 1111111 Oncidium_Gower_Ramsey_OMADS8 00-11-- Oryza_sativa_OsMADS2 ---11-- Oryza_sativa_OsMADS4 10111-- Osmanthus_fragrans__OfGLO ---11-- Pachysandra_terminalis_PAtePI 00-11-- 'Papaver somniferum PapsPI-1' 00-11-- 'Papaver somniferum PapsPI-2' 00-00-- Petunia_hybrida_PHGLO1 ---11-0 Petunia_hybrida_PHGLO2 00-11-0 Phalaenopsis_equestris_PeMADS6 111111- Picea_abies_DAL11 11----- Picea_abies_DAL12 11----- Picea_abies_DAL13 11----- Solanum_lycopersicum_TPI 00-11-0 Taihangia_rupestris_TrPI 11-11-1 Tulipa_gesneriana_TGGLO 1-11-1- Vitis_vinifera_VviPI 00-11-0 Zea_mays_ZMM16 0-01-1- ; END; BEGIN CHARACTERS; TITLE cDNA_sequences; DIMENSIONS NCHAR=888; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Akebia_trifoliata_AktPI ATGGGGAGAGGTAAGATTGAGATCAAGAGGATTGAAAACTCAACAAACAGGCAGGTGACTTATTCAAAG---AGGAGAAATGGTATCATGAAGAAGGCTAAGGAGATTACTATTCTTTGTGATGCTCAGGTTTCTCTTGTTATCTTCTCCAGTACTGGAAAGATGTCT------------------------GACTATTGTAGT---CCT------TCAACCACGCTTACAAAGGTCTTAGATCGATACCAGAAA---ACTTCAGGA---AAGAGGTTGTGGGATGCTAAACATGAG---TATCTCAGTACTGAAGTGGATAGAATCAAGAAAGAGAACGAC------------TGCATGCAGATAGAACTC------------AGGCACTTGAAGGGTGAGGATATCACCTCTCTCAACCCCAAAGAACTCATCCCCATAGAGGAAGCCCTTGAAAACGGCCTTGTTAACGTTAGAGCCAAACAGATGGAGTACTTGAAA------------ATGCTTAAGAAAAAT------------GAAAGATATCTAGAGGAGGAGAATAAGCATCTTAGGTGCATCTTGCATCATCAACAA---ATA------------GAAATCGAG---------GGG---AATATGAGAATGGAGATGGAA---------AATGGGTAT------AATACTCAGAAG------------GGAAGGGAC---TATCCTTCT------------------CAGATG---------CCATTTGCATTTCGTGCG---CAGCCAATG---------------------------------CAACCCAATTTACAGGAGAATAAA--------------------------------------- Amborella_trichopoda_AmPI ATGGGGAGGGGGAAGATTGAGATAAAGCGGATAGAGAACTCGGCGAACAGGCAGGTGACTTATTCGAAG---AGGAAGAGCGGAATACTGAAGAAGGCCAAGGAGATTTCGGTTCTATGCGATGCCAAGGTCTCCCTCGTCATATTCTCCAGTGCTGGCAAAATGTCC------------------------GAGTTTTGCAGT---CCA------TCCATCGAGTTGAAGAATATGCTAGAAGAGTACCAGAGG---ACTTCAGGG---AAAAAGTTATGGGATTCCCGTCATGAG---TATTTGAGCACAGAGGTAGATAGGATGAAGAAAGACAACGAA------------CAGATGAGGATTGAGTTG------------AGGCACTTGATGGGAGAAGATCTCAACTCATTGACGCCCCATGAACTCAATAGGATTGAGGACTCCCTGCAAATGGGCCTCTCCAGTGTTCGTGCTAAACAGATGGAACACATTCGCACCAGGACTGAGATGCTAAAAAACAAC------------GAAAGGATTCTCGAAGATCAGAACAAACAATTGAAGTACATAATGCATCAGATTGAA---GGT------------GGTGATGAAGCG------------GAGCGCAGGTATCAAAACCAA------------------------------CAGAAC------------GGAAGGGAT---TATCCTCAG------------------CAAGCT---------CTCACTGCATTTCGTGTG---CAACCCATC---------------------------------CAACCCAATCTTCAGCAGAATAAA--------------------------------------- Antirrhinum_majus_GLO ATGGGAAGAGGAAAAATTGAGATCAAAAGAATTGAGAACTCAAGCAACAGGCAGGTTACTTACTCAAAG---AGAAGAAATGGGATCATGAAAAAAGCTAAGGAGATCAGTGTTCTTTGTGATGCTCATGTCTCTGTTATCATCTTTGCTAGCTCTGGCAAGATGCAT------------------------GAATTTTGTAGC---CCT------TCTACTACGTTGGTTGATATGTTGGATCACTACCACAAG---CTCTCTGGG---AAGAGGCTCTGGGATCCCAAACATGAG---CATCTGGACAATGAGATCAATAGAGTCAAGAAAGAGAATGAC------------AGCATGCAAATTGAGCTC------------AGGCACCTAAAGGGAGAAGATATCACAACTTTGAACTACAAAGAGCTAATGGTTTTAGAGGATGCCCTTGAAAATGGGACCTCAGCTCTCAAAAACAAACAGATGGAGTTTGTCCGG------------ATGATGAGGAAACAT------------AATGAAATGGTAGAGGAGGAGAATCAAAGCCTCCAATTCAAACTGCGGCAAATGCAT---CTC------------GATCCTATGAAC------GAC---AACGTGATG---GAAAGCCAG---------GCGGTATACGATCATCATCATCACCAGAAT---------ATTGCTGAT---TACGAAGCT------------------CAGATG---------CCTTTCGCGTTCCGTGTC---CAGCCAATG---------------------------------CAGCCTAATCTTCAGGAGCGTTTC--------------------------------------- Aquilegia_vulgaris_AqvPI ATGGGGAGAGGAAAGATTGAGATCAAGAGAATTGAAAACTCTACAAACAGACAGGTTACTTATTCAAAG---AGAAGAAATGGGATTTTGAAGAAAGCTAGAGAAATTCATATTCTTTGTGGTGCTGAGATTGCTCTAGTTATTTTCTCCAGTACTGGCAAGATGTCT------------------------GAGTACATCAGC---CCTCCTGGTCCTACAACGCTGATAAAGATCTTGGACAAATATCAGAAG---ACTTCAGGA---AAGAAGCTGTGGGATGCAAAGCATGAG---TATCTCAGTAGTGAATTGGATAGAATCAAGAAGGAAAATGAT------------AACATGCAGATCGAACTC------------AGGCACTTGAAGGGTGAGGATATCAATTCCCTTAATGCCAAAGAACTCATTCCTATTGAAGAAGCCCTCCAAAATGGTCTTTCTAAAGTTCGTGACAAAAAGAGTGATATCTGGAGA------------ATGATGAGGAAAAAT------------ACAGGATTGCTAGAGGAAGAGAACAAGCGCCTCAGTTACCACTTGCATTCTCTGGAA---ATT------------GGC---------------GGG---AATGATAGA---GAAATGGAA---------AATGGATAT------CAT---CAAAAA------------GGAAGGGAC---TATCCTGCT------------------CAGATG---------CCATTCACCTTCCGTGTT---CAGCCAATC---------------------------------CAGCCTAATTTACAGGAGAGTAAA--------------------------------------- Arabidopsis_thaliana_PI ATGGGTAGAGGAAAGATCGAGATAAAGAGGATAGAGAACGCAAACAACAGAGTGGTGACGTTCTCAAAG---AGGAGGAATGGATTGGTGAAGAAGGCTAAAGAGATCACAGTTCTTTGTGATGCAAAAGTTGCCCTCATAATCTTTGCAAGTAATGGTAAGATGATT------------------------GATTACTGTTGT---CCT------TCCATGGATCTTGGTGCTATGTTGGACCAATACCAGAAG---TTATCTGGC---AAGAAACTATGGGATGCTAAGCATGAG---AACCTTAGCAATGAGATTGATAGGATCAAGAAAGAGAATGAT------------AGCTTACAACTGGAGCTC------------AGGCATTTGAAGGGAGAAGATATACAGTCTCTCAACTTGAAAAATCTGATGGCTGTCGAGCACGCCATTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATGGAGATCCTTATA------------TCAAAGAGGAGAAAT------------GAGAAGATGATGGCGGAGGAGCAACGGCAACTCACTTTCCAGCTGCAACAACAGGAG---ATG------------GCTATAGCAAGC------------AACGCAAGA---GGAATGATG------------------------------------------------ATGAGAGAT---CATGATGGG---------------------------------CAGTTTGGATATAGAGTG---CAACCGATT---------------------------------CAGCCAAATCTTCAGGAAAAGATTATGTCTTTGGTCATCGAT--------------------- 'Brassica napus BnPI-1' ATGGGTAGAGGAAAGATCGAGATAAAGAGGATAGAGAACGCCAACAACAGAGTGGTGACATTCTCAAAG---AGGAGGAATGGGTTGGTGAAGAAGGCCAAAGAGATCACGGTTCTTTGCGATGCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACT------------------------GATTATTGTTGT---CCT------TCCATGGACCTTGGTGCTATGTTAGACCAATACCAGAAG---TTATCTGGC---AAGAAACTATGGGATGCTAAGCATGAG---AACCTCAGCAATGAGATTGACAGGATCAAGAAAGAGAATGAT------------AACTTGCAACTCGAGCTC------------AGGCACTTGAAGGGGGAAGATATACAGTCTCTCAACTTAAAAAACCTGATGGCCGTAGAGCATGCCATTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATGGAGTTCCTCATG------------ACAAAGAGGAGAAAT------------GAGAAAATGTTGGTGGAGGAGAATCGGCAACTCAGTTTCCAGCTGCAACAACAAGAG---ATG------------GCTATAGCTAGC------------AACGCAAGA---GGAATGATG------------------------------------------------ATGAGAGAT---CAAAATGGG---------------------------------CAATTTGGATATAGAGTT---CAGCCGATT---------------------------------CAACCAAATCTTCAGGAAAAGATTATGTCTTTGGTCATCGAT--------------------- 'Brassica napus BnPI-2' ATGGGTAGAGGAAAGATCGAGATAAAGAGGATAGAGAACGCAAACAACAGAGTGGTGACGTTCTCAAAG---CGGAGGAATGGGTTGGTGAAGAAGGCCAAAGAGATCACGGTTCTTTGCGATGCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACT------------------------GATTATTGTTGT---CCT------TCCATGGACCTTGGTGCTATGTTAGACCAATATCAGAAG---TTATCTGGC---AAGAAACTATGGGATGCTAAGCATGAG---AACCTCAGCAATGAGATTGACAGGATCAAGAAAGAGAATGAT------------AACTTGCAACTTGAGCTC------------AGGCACTTGAAGGGGGAAGATATACAGTCTCTCAACTTAAAAAACCTGATGGCCGTAGAGCATGCCATTGAACGTGGCCTCGACAAAGTCCGAGACCACCAGATGGAGTACCTCATG------------ACGAAAAGGAGAAAT------------GAAAAAATGTTGGCGGAGGAGAATCGGCAACTCAGTTTCCAGCTGCAACAACAGGAG---ATG------------GCTATAGCTAGC------------AATGCAAGA---GGTATGATG------------------------------------------------ATGAGGGAT---CATGATGGA---------------------------------CAATTTGGATACAGAGTC---CAGCCGATT---------------------------------CAGCCAAATCTTCAGGAAAAGATTATGTCTTTGGTCATCGAT--------------------- 'Brassica napus BnPI-3' ATGGGTAGAGGAAAGATCGAGATAAAGAGGATAGAGAACGCAAACAACAGAGTGGTGACGTTCTCAAAG---AGGAGGAATGGGTTGGTGAAGAAGGCCAAAGAGATCACGGTTCTTTGCGATGCAAAAGTTGCTCTCATAGTCTTTGCAAGTAATGGTAAGATGACT------------------------GATTATTGTTGT---CCT------TCCATGGACCTTGGTGCTATGTTAGACCAATACCAGAAG---TTATCTGGC---AAGAAACTATGGGATGCTAAGCATGAG---AACCTCAGCAATGAGATTGACAGGATCAAGAAAGAGAATGAC------------AACTTGCAACTTGAGCTC------------AGGCACTTGAAGGGGGAAGATATACAGTCTCCCAACTTAAAAAACCTGATGGCCGTAGAGCATGCCATTGAACATGGCCTCGACAAAGTCCGAGACCACCAGATGGAGTACCTCATG------------ACGAAAAGGAGAAAT------------GAAAATGTTGGCGGAGGAGAATCG------------------------GCAACTCAG---TTT------------CCAGCTGCAACA------------ACAGGAGAT---GGCTATAGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Camellia_japonica_CjGLO1 ---------------------------------------------AATCGGCAAGTGACGTATTCGAAGAGGAGGAGGAATGGGATCATGAAGAAAGCTAAAGAGATCACTGTTCTTTGTGATGCTCAGGTCTCTCTTGTCATCTTTGCCAGCTCTGGGAAGATGCAT------------------------GAGTACTGTAGC---CCT------TCCACTACGTTGGTTGACATCTTGGATAAGTATCACAAG---CAGTCTGGG---GAGAGGTTGTGGGATGCTAAGCATGAG---AATCTCAGCAACGAACTTGATAGAATCAAGAAAGAGAATGAT------------AGCATGCAGATTGAGCTG------------AGGCACCTGAAAGGAGAAGACATAACATCTTTGCACCACAAAGAGCTCATGGCCATAGAGGAAGCCCTCGAAAATGGGCTAGGGAGTGTTCGCGAGAAACAGATGGAGTACATTGAC------------ATGATGGAGAAAAAT------------AAAAAGACGTTGGAGGAGGAGAACAAGCACCTCAATTTTATGTTGCACCAGCAAGAG---ATG------------AACATGGAG---------------AGCAGCAGA---GAGATGGAA---------AATGGATAT------CAT---CAGCGA------------GTGCGAGAT---TTCCAGTCC------------------CAGATG---------CCTTTTGCCTTCCGCGTG---CAGCCAATT---------------------------------CAGCCAAATTTGCAAGAGAGAATC--------------------------------------- Camellia_japonica_CjGLO2 ---------------------------------------------AACCGGCAAGTGACGTACTCGAAG---CGGCGAAATGGGATCTTGAAGAAAGCTAAGGAGATCACTGTTCTATGTGATGCTCAGGTCTCTCTTGTTGTCTTTGGCAGTTCTGGCAAGATGCAT------------------------GAGTTCTGTAGC---CCT------TCCACTACGTTGGTTGACATCTTGGAGAAGTATCACAAG---CAGTCTGGG---AAGAGGTTGTGGGATGCTAAGCATGAG---AATCTCAGCAATGAATTGGATAGAATCAAGAAAGAAAATGAC------------AGCTTGCAGATTGAGCTC------------AGGCACTTGAAAGGAGAAGACATAACATCTTTGCAGCCCAGAGATCTCATGGCCATAGAGAACGCCCTCGAAACTGGGCTTGAAAGTGTTCGCTACAAACAGTCGGAGATTCACAGG------------ATGATGAAGAAAAAT------------GGAAAGATGCTGGAGGAGGATAACAAGCAGCTCAATCTGATACTGCATCAGCAAGAG---ATG------------GAGAAG------------------GGAAGTAGA---GAATTTGAG---------AATGGATAT------CAT---CGGCAA------------GTGAATGAC---TACCAGCCC------------------CAGATG---------CCTTTCACCTTCCGGGTG---CAGCCCATC---------------------------------CAGCCAAATTTGCATGAGAGAATT--------------------------------------- Chloranthus_spicatus_CsPI ------------------------------ATCGAGAACTCGACGAACCGGCAAGTGACCTTCTCTAAA---AGAAGAAATGGGATAGTGAAGAAGGCGAAGGAGATAACTGTGCTCTGTGATGCCAAGGTCTCTTTCATCATTTTTTCTACTACTGGCAAAATGTTC------------------------GAGTTCGTTAGC---CCC------TCTACTACGTTGATGGATATGTTGGAGAGATATCAAACT---AATTCTGGG---AAGAGGCTTTGGGATGCTAAGCATGAG---CGCCTCAGTGCAGAGCTCGATAGGATCAAGAAAGAGAACGAT------------AGCATGCAGATTGAGCTC------------AGGCACTTGAAGGGCGAGGATATTAATTCCTTGCATCCGAAGGAGCTTATCCCAATTGAGGAAGCCCTTCAGAGTGGTCTCACTAATGTTCGTGCGAAGCAGATGGACTTCCTAAAG------------ATGCTCAAGAAGAAT------------GAAAGAACCTTGGAGGATGAGAATAAGCGTTTAAGCTACATCTTGCATCATCAACAA---CTT------------GCATTGGAT---------GGA---AATATGAGG---GATCTGGAC---------AATGGGTTT------CAT---CCAAAA------------GAGAGGGAT---TATTCTTCC------------------CAAATG---------CCGTTCATCTTCCGCGTG---CAGCCAATC---------------------------------CAGCCCAACTTGCAGCAGAGCAAG--------------------------------------- Chrysanthemum_grandiflorum_CDM86 ATGGGCACGGGAAAGATAGAGATCAAGAGGATAGAAAACACAAGTAACAGACAAGTCACATATTCAAAA---AGAAAGAATGGAATCATCAAGAAAGCTAAAGAAATAACTGTTCTTTGTGATGCTAATGTCTCTCTTGTTATCTATGGATCTTCTGGCAAGATGTAT------------------------GAGTACTGCAGC---CCT------AAAACTAATTTGATTGACATGCTGGATCGATATCAAAGA---CTTTCTGGA---AACAAGTTGTGGGATGCTAAACATGAG---AATCTTCAGAATGAAATTGATAGAATCAAGAAAGAGAATGAA------------AGCATGCAAATAGAGCTC------------AGGCACTTGAAGGGAGAAGATATCACATCTTTGAACTATGAAGAACTAATTGCGTATGAAGATGCACTTGAAAATGGACTCACCAATATCCGTGAGAAAAAGGATGACATCCCCAAA------------ATCATGAGGAAGCAT------------GAGCAAGTTTTGGAGGAGGAAAATAAGCATCTTATGTATTTAGTGCAACAAAGTGAA---ATG------------GCAGCCATGGGA---------------------------------------------------------------------------------------GAT---TACCAAGCT------------------CATGAA---------CCCTTTTCATTTCGTGTC---CAGCCAATG---------------------------------CAGCCTAACTTGCATGAGAGGATG--------------------------------------- Davidia_involucrata_DiGLO1 ------------------------------------------------CGGCAGGTGACGTACTCGAAG---CGGCGGAATGGGCTCATGAAGAAGGCTAAGGAGATTACTGTTCTCTGTGATGCTCGTGTCTCTCTTGTTATCTTTTCTAGTTCTGGCAAGATGCAT------------------------GAGTACTGTAGC---CCT------TCTACTGACTTAATTGGCATCTTGGATCGATACCACAAG---CAGTCTGGG---AAGAGGTTGTGGGATGCTAAACATGAG---AATCTCAGCAATGAAATTGATAGAATCAAGAAAGAGAATGAT------------AGCATGCAGATTAAGCTC------------AGGCACCTGAAGGGGGAAGATATCACATCTTTGCACTACAAAGAGCTCATGGCCATAGAGGAAGCACTCGAGAATGGACTTGCGGGTGTTCGCGACAAACAGATGGAAATCTACAAC------------ATGAAGAGGAAAAATTTAATTGTTCAAGATGAAATGCTGGAGGAGGAGAACGAGCACCTCAAATACATGTTGCAAGAGATGACT---CTG------------AAT---------------GGT---AATGTGAGA---GACATGGAG---------AATGGATAT------CAT---CAGAGA------------GAGAGAGAC---TTCCAGCCC------------------CAAATG---------CCTTTTGCCTTCCGCGTG---CAGCCCAAT---------------------------------CAGCCAAATTTACAAGAGAGACTT--------------------------------------- Davidia_involucrata_DiGLO2 ---------------------------------------------AACCGGCAAGTGACGTATTCGAAG---AGGCGGAATGGGCTCATGAAGAAGGCTAAGGAGATCACTGTTCTCCGCGATGCTCAAGTCTCTCTTGTTATCTTTGCTAGTTCTGGCAAGATACAC------------------------GAGTATTGTAGC---CCT------GCCACTAGCTTGGTTGACATCTTGGATCGATACCACAAC---CAGTCTGGG---AAAAGGTTGTGGGATGCTAAACAAGAG---AATCTCAGCAATGAAATTGATAGAATCAAGAAAGAGAATGAC------------AGCATGCAGATTGAGCTC------------AGGCACCTGAAGGGGGAAGATATCACATCTTTGCAACCCAAAGAGCTCATGACTATAGAGGAAGCACTGGAGAACGGGCTTGCGAGTGTTCGTGACAAACAGTCGGAGATCGTCAAC------------ATGTTAAGGAAAAAT------------GGTAAAATGCTGGAGGAGGAGAACAAGCACCTCAACTACAAGTTGCGCTGGCAGCAAGAGATG------------GGTATGGAT---------GGT---AATGTGAGA---GATTTGGAG---------AATGGATAT------GATCATCAAAGATCA---------GTGAGAGATCAGTTCCAGCCC------------------CAGATG---------CCCTTTGCCTTCCGCGTG---CAGCCAATT---------------------------------CAGCCAAATTTACAGGAGAGAATT--------------------------------------- Eschscholzia_californica_SEI ATGGGGAGGGGTAAGATAGAGATCAAGAGGATAGAGAACTCAACAAACAGGCAAGTAACTTACTCTAAG---AGGAAGAATGGGATAATCAAGAAAGCTAAAGAGATTACTATCTTATGTGATGCTGAAGTTTCTCTTGTTATCTTTTCTAGCACTGGCAAGATGTCT------------------------GAGTTTCAT---------------TCTTCTCCGTTGGTGAAGATTTTAGATAGATATCAGAAG---GCTTCAGGG---AAGAGACTATGGGATGCTAAGCATGAG---TATCTGAGTGCTGAAGTGGATAGAATCAAGAAAGAGAATGAC------------AACATGAAGATTGAGCTC------------AGGCACCTGAAAGGAGAAGATCTGACTTCTTTACATCCTAAAGAGTTAATCCCTATTGAAAAAGCCCTAGAAAATGGCACTGCTAATGTTCGAGCTAAACAGATGGAGATCTGGAAA------------ACTCTCCAGAAAAAT------------GGAAGACTGTTAGAGGAAGAGCATAAGCGCTTTACCTACATCTGTCAACAGAAAGAA---ATA------------GAAATGGAACGC------GGT---CATGTCGGA---ACTACTACA---------GTTGGAACGACT---------------------------GGTATGGAT---TACTCTCCTCCTAACCAGCACCACCATCAGATG---------CCGTTCGCCTTCCGAGTG---CAGCCAAAT---------------------------------CAACAAAACACCAACACCAACAACAACAACAACAAA--------------------------- Euptelea_pleiospermum_EUplPI ATGGGGAGAGGTAAGATCGAGATCAAGAGGATTGAGAACTCGACAAACAGGCAGGTGACTTACTCGAAG---AGGAGAAATGGGATCATTAAGAAGGCCAAGGAGATTTCAGTTCTCTGTGATGCTGAGGTTTCTCTTGTTATCTTCTCTAGTACTGGCAAGCTGTCT------------------------GAGTACTGC---------------AGCACTACGCTGATGCATGCCTTGGATCGCTACAATGAG---TCTTCAGGGAAGAAGAAGTTATGGGATGCAAAGCATGAG---CATCTCAGTAACGAAGTGAATAGAATCAAGAAAGAGAACGAC------------AACATGATGATCGAACTC------------AGGCACTTGAAGGGTGAGGATATCACCCCACTCCATTACAAAGAACTGATCCCTCTAGAGGAAGCCCTCGAAAATGGCCTTGCTAACGTTCGTGCCAAACAGATGGAGTTCTTCAAA------------ATGCGTAAGAAAAAT------------GAAATAATGCTAGAGGATGAGAATAAGTACCTCCGTTACATCTTGCATCAGCAAGAA---ATC------------GCAATGGAT---------GGG---AATGTGAGA---GAGCTGGAT------------------------CAT---GAGAAA------------GGAAGAGAC---TAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------- Gerbera_hybrida_GGLO1 ATGGGGAGAGGAAAGATAGAGATCAAGAGGATAGAAAACACCAGTAACAGGCAAGTCACCTACTCAAAG---AGAAAGAATGGCATCATCAAGAAAGCTAAAGAAATTACTGTTCTTTGTGATGCTAATGTTTCCCTTGTTATCTATGGCTCTTCTGGCAAGATGTAT------------------------GAGTATTGTAGC---CCC------AAAACCAATTTGATTGACATGCTGGATCGCTATCAAAGG---CTTTCTGGA---AACAAGTTGTGGGATGCTAAACATGAG---AATCTCCAGAATGAAATTGATAGAATCAAGAAAGAGAACGAG------------AGCATGCAGATTGAGCTA------------AGGCACTTGAAAGGGGAAGATATAACATCTTTGAACTATGAAGAACTGATTGCCTACGAAGATGCCCTTGAAAATGGACTCACCAATATTCGTGAAAAGAAGGATGAAATCCCAAAA------------ATCATGAGGAAACAT------------GAGCAAGTTCTGGAGGAGGAAAATAAGCACCTTATGTATTTAGTGCAACAAAGTGAG---ATG------------GCAGCCATGGGA---------------------------------------------------------------------------------------GAT---TACCAAGCAGCT---------------CACGAG---------CCTTTCTCCTTCCGTGTC---CAGCCAATG---------------------------------CAGCCTAATTTGCATGAGAGGATG--------------------------------------- Gnetum_gnemon_GGM15 ATGGGAAGGGGCAAACTGGAGATCAAGCGGATCGAAAACCTGACGAACAGGCAAACGACCTTTGCAAAG---CGCAAGAATGGCCTCATGAAGAAAGCAAAAGAACTATCTATTCTTTGTGACGCGCAGGTTGCTCTCATCGTCTTCTCTCCCACCGGAAAGCAGTTCATAGAGGCTCACGGTAATAATGCCGAATGCACC---------------ATAGAAAGCGTGAGGGATGTCATAGAGAGGTACAAGCAA---CAATCCAAG---GAAAAGCTACTTGATTCAGAAGATGAG---AATCTTGCTAACGAGTTGGAAAAGCAGAAGAAACAATCTGCA------------GATCTGCAAACCAAATTG------------AAGCATCTGACTGGCCAGGATATTAACTTGCTGAGCCCAGATGCTCTCGGTGACTTGGAGCATATTTTGCAAGAGGCTCTTACCAGAGTGCGTCAGAAGAAGATCCAACGCTGGCTCAGTAAGAAGATTGAAATGGAGAGACGT------------GTGGCTAAGCTAAATGAATATAAGAATGCACTGAATGGAATGTATTCGCAGGCACAG---------------------------------------------------------------------------GGATATCAGCATTACAATCACGCTCAT---------CATGGAATAATGGCAGCATCG------------------GTATCG---------GCTGCTTATCACCGCGTT---CAACCCTACCCAGGAAATCTGGACGATGTGTGCTACCAACCACAACCCAATCTTCAGCTAAGGTTTTTG------------------------------------ Gnetum_gnemon_GGM2 ATGGGCAGAGGAAAGATAGAGATGAAGAAGATAGAGAACACCAACAACAGGCAGGTTACGTTCTCCAAG---AGGAGAAATGGACTCATGAAGAAAGCCCAAGAGCTGGCAGTGCTCTGTGATGCAGAGGTGGGTTTGATCATCTTCTCCTCCACTGGCAAGCTTTTT------------------------CAATACTGC---------------AACACCAGTATGAGCCAGGTTCTAGAGAAATACCACAAG---TCTCCAGGA---GTGGATCATTGGGACATTGAGCTTCAA---ATCATGGGGCAAGAGCTCATCAAAGAGAGAAGAGAGAACGAG------------AAGCTTCGCTCTAAATTG------------AGGTATATGATGGGGGAAGACATTGGCGAACTAAAGATTGCACAGTTAGAAAAGCTTGAACATGATCTTGAAAGTGCACTCAGATTAGTCCGCCGGAAAAAGGATCACGCATGGGATTAT------------------------------------CAAAGGACCATTCTTCTGAAGAAGGTTAAGTTACAGTATGCCTTGCACGAGCAGATGAGCAGACAGCTACCGATGGAAGTTCTTGCAAAAGCTGAGGAAGAGGCTAGGCAGATTCTGGCGTCAACAGCTGAAGAAGAGGCTCGACAG---------------------------------------------------------------------------AATATGACGTTTTCTTTT---CTACCAAAT---------------------------------GCATCAACGCAGTATGCCAGAATTGCT------------------------------------ 'Hedyosmum orientale HoPI_1' ATGGGTCGAGGAAAGATCGAAATCAAGCGGATCGAGAATTCGACGAACCGTCAGGTGACGTACTCAAAG---CGGAGAAATGGGTTGATAAAGAAGGCAAAAGAGATCAGCGTCCTCTGCGACTCCAAAATCTCACTCATTATCTTCTCGAGCACTAACAAGATGTCC------------------------GAGTTCGTCAGT---CCC------TCCACCACGTTGCCGGAATTATTGGAGAAATATCAAAAC---AACTCTGGG---AAGAGGTTATGGGATGCTAAGCATGAG---CGTCTGAGCGCGGAGATTGATAGGATCAAAAAGGAGAATGAG------------AGCATGGAGATTGAGCTC------------AGGCACTTGAAGGGAGAAGATGTCAATTCATTGCATGTAAAGGAGCTCATCCCCATAGAGGAAACCCTTGAAAATGCCCTTGTCAATATTCGTGACAAGCAGATGGACTACCTGAAG------------ATGCTGAAGAAGAAT------------GAAAGGAACTTGGAGGAGGAGAATAAGCGCTTAAGCTACATCCTGCACCATCAGCAA---ATG------------GCGACGGAT---------GGA---AATTTAAGA---GATCTAGAGCAC------GGCAGCTAT------CAT---CGTAGA------------GGGACTGGT---TATCCTTGC------------------GAAATC---------ACATTAGCTTCTCGGGTG---AGACCAAAT---------------------------------CAGCCAAATTTGCAGGAGACCGAG--------------------------------------- 'Hedyosmum orientale HoPI_1A' ATGGGTCGAGGAAAGATCGAAATCAAGCGGATCGAGAATTCGACGAACCGTCAGGTGACGTACTCAAAG---CGGAGAAATGGGTTGATAAAGAAGGCAAAAGAGATCAGCGTCCTCTGCGACTCCAAAATCTCACTCATTATCTTCTCGAGCACTAACAAGATGTCC------------------------GAGTTCGTCAGT---CCC------TCCACCACGTTGCCGGAATTATTGGAGAAATATCAAAAC---AACTCTGGG---AAGAGGTTATGGGATGCTAAGCATGAG---CGTCTGAGCGCGGAGATTGATAGGATCAAAAAGGAGAATGAG------------AGCATGGAGATTGAGCTC------------AGGCACTTGAAGGGAGAAGATGTCAATTCATTGCATGTAAAGGAGCTCATCCCCATAGAGGAAACCCTTGAAAATGCCCTTGTCAATATTCGTGACAAGCAGATGGACTACCTGAAG------------ATGCTGAAGAAGAAT------------GAAAGGAACTTGGAGGAGGAGAATAAGCGCTTAAGCTACATCCTGCACCATCAGCAA---ATG------------GCGACGGAT---------GGA---AATTTAAGA---GATCTAGAGCAC------GGCAGCTAT------CAT---CGTAGA------------GGGACTGGT---TATCCTTGC------------------GAAATC---------ACATTAGCTTCTCGGCCC---TTGTCTTTG---------------------------------CAGGGAGGAGATATGGATTTGCTGTTTGAACTT------------------------------ 'Hedyosmum orientale HoPI_1B' ATGGGTCGAGGAAAGATCGAAATCAAGCGGATCGAGAATTCGACGAACCGTCAGGTGACGTACTCAAAG---CGGAGAAATGGGTTGATAAAGAAGGCAAAAGAGATCAGCGTCCTCTGCGACTCCAAAATCTCACTCATTATCTTCTCGAGCACTAACAAGATGTCC------------------------GAGTTCGTCAGT---CCC------TCCACCACGTTGCCGGAATTATTGGAGAAATATCAAAAC---AACTCTGGG---AAGAGGTTATGGGATGCTAAGCATGAG---CGTCTGAGCGCGGAGATTGATAGGATCAAAAAGGAGAATGAG------------AGCATGGAGATTGAGCTC------------AGGCACTTGAAGGGAGAAGATGTCAATTCATTGCATGTAAAGGAGCTCATCCCCATAGAGGAAACCCTTGAAAATGCCCTTGTCAATATTCGTGACAAGCAGATGGACTACCTGAAG------------ATGCTGAAGAAGAAT------------GAAAGGAACTTGGAGGAGGAGAATAAGCGCTTAAGCTACATCCTGAAAAAT------------------------------------------------------------------------------------------------------------------------------------GGATGC--------------------------------------------------------------------------------------------------------------------------------------------------------------- 'Hedyosmum orientale HoPI_2' ATGGGTCGAGGGAAGATCGAGATCAAGCGGATCGAGAACACCGCAAACCGTCAAGTAACCTATTCGAAG---CGTCGAAATGGATTGGTGAAGAAAGCGAGGGAGATCAGCATCCTTTGTGACGCGAAGGTCTCTCTCGTCGTTTTTGCTACTTCAGGAAAAATGTCT------------------------GAGTTCGTCAGC---CCA------TCTACCACGTTGATTGAGTTCTTAGAGAAGTACCAGAAT---AATTCAGGG---AAGAGGCTCTGGGATGCTAAGCACGAGCAGCATCTCAGCGCAGAGATTGACAGGATCAAAAAGGAGAATGAT------------AGTATGCAGATAGAGCTC------------AGGCACTTGAAGGGAGAAGATATCAACTCTTTGCATGCTAAGGAGCTCATCCCCATTGAGGAAGCCCTCGAGAATGGCCTTGTGAATGTGCGTTCCCAGCAGATGGAGTTTCTAAAG------------ACGCTAAAAAGGAAT------------GAAAGAAACCTGGAGGAGGAGAATAAGCGCCTAAGATACATATTGCATCATCAAGGA---ATG------------GCTGTGGAT---------GGC---AACTTGAGG---GAAATGGAA---------AGTAATTAT------TAT---CGGCGT------------GGGAGGGAT---TATCCTACC------------------CAAGTC---------CCATTCTCCACTCGTGTA---CAGCCAAAT---------------------------------CAGCCCAATTTGCAGGAAAATGAA--------------------------------------- 'Hedyosmum orientale HoPI_3' ATGGGTCGGGGAAAGATCGAGATCAAGCGGATTGAGAACTCAACGAACCGTCAAGTGACCTACTCAAAG---CGGAGGAATGGGTTGATTAAGAAGGCAAGAGAAATTGGCGTCCTCTGTGACTCCAAAATCTCACTCATCATTTTCTCTAGTACTGGCAAGATGTCT------------------------GAATTTATTAGT---CCC------TCCACAACGTTGCCTGAGCTTTTGGAGAAATATCAGAAT---AATTCTGGG---AAGAGGCTTTGGGATGCTAAGAATGAG---CATCTTAGCTCAGAGATCGAGAGGATGAAGAAAGAGAACGAT------------AGCATGCAAATGAAGCTC------------AGGCATTTGAAGGGTGAGGACATAAATTCTTTGCAAGCAAAGGAGCTCATTGCTATTGAGGAAGCCCTTGAGAATGGCCTCACCTATGTTCGTTCCAAACAGATGGAATTTCTAAAG------------AAGTTAGAAGAGAAG------------GAAAGAATCTTAGCGGAGGAGCATAAGCGCTTAAGCTCTCTGTTGCGTGATCAACAA---ACG------------GAGATGGAA---------GGA---AATATAAGG---GACATGGAG---------CATGCGTAT------CAT---TCAGGA------------GGAAGGGAT---TATTCTACA------------------CAAATC---------CGATTTCCCTTCTTTCCG---CAGCCAAAT---------------------------------GTGACCAATTCA--------------------------------------------------- Impatiens_hawkeri_IhGLO ------------------------------------------------------------------------------AATGGCCTCATGAAGAAAGCCAAAGAGATCACGGTTCTTTGTGATGCTAAGGTTTCTCTTGTCATCATCGGAAGCTCCGGCAAGATTCAT------------------------GAGTATTGCAGC---CCA------TCCACAACTTTACCGGATATCCTCGAAAGATATCACAAG---CAGTCTGGG---AAGAAGCCATGGGATGCCAAGCACGAG---AACTTGAGCAATGAGATTGATAGAATCAAGAAAGAGAATGAC------------AACATGCAGATTGAGCTA------------AGGCATCTAAAAGGGGAAGACATAACCTCTTTACATTACAAAGAGCTCATGGCTTTAGAAGATGCCCTTGAAAATGGCCTATTTGGAGTTCGCGAAAAACAGATGGAGATTTATAGG------------ATGATGAAGAAAAAT------------GATAGGATTTTGGAGGAGGAGCACAAAGAGTTAAATTTTGTGCTGCAACAAAGAGAG---ATG------------GCAATGGAACGT------------------AGA---GAAATGGAACAT------AACAGTTAC------CAC---CAGCAA------------CTGCAAGAG---TTTGAACCA------------------CAAATG---------CCTTTCACCTTCCGAATC---CAGCCAATG---------------------------------CATCCAAATCTGCAAGAGAGGATG--------------------------------------- Joinvillea_ascendens_JaPI ATGGGGAGGGGAAGTATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAG---AGGCGGAATGGGATCCTGAAGAAGGCCAGGGAGATCAGCGTGCTGTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTAC------------------------GACTACTGCTCC---CCC------AAGACCACGCTGCCAAAAATTTTGGAGAAGTATCAGACC---AACTCCGGG---AAGATACTGTGGGATGACAAGCACAAG---AGTCTGAGCGCGGAGATCGATCGGATCAAGAAAGAGAACGAT------------AGCATGCAGATCGAGCTC------------AGGCACTTGAAAGGCGAGGATCTGAACTCGCTGCAGCCCAAGGAGCTGATCTCGTTCGAGGAAGCGCTCCAGAACGGGCTGACCAACCTGCGCGACAAGCAGATGGATCACTGGAAG------------ATGCTCAGGAGGAAT------------GGGAAGATGCTGGAAGAGGAGAACAAGTTGCTGGCTTTCAGACTGCATCAACAAGAT---GTT------------GCACTGAGT---------GGG---AGCATGAGG---GATCTGGAG---------CTCGGGTAC------------CATCCT------------GATAGGGAGTTTGTTGCTCCC------------------CAGATG---------CCGATGACCTTCCGCGTG---CAACCCAAC---------------------------------CATCCTAACCTGCAGGAAAACAAG--------------------------------------- 'Lacandonia schismatica Ls-PI' ATGGGAAGGGGGAAGATCGAGATAAGGAGGATCGAGAACGCCACCAACAGGCAGGTGACCTTCTCCAAG---AGGAGGAACGGGATCATCAAGAAGGCCAAGGAGATCAGCGTCCTCTGCGATGCCAAGGTCTCCGTGGTCATCTTCTCCAGCTCCAACAAGATGTTT------------------------GAGTACTGCACT---CCC------TCCACCACGCTGTCCAAGATCTTGGAGAACTACCAGATT---AACTGTGGG---AAGAAACTGTGGGATGCCAAGCATGAG---AATTTGAATGCAGAGATTGATCGCATCAAGAAGGAGAACGAC------------AACATGCAGATCGAACTA------------AGGCACTTGAAGGGAGAGGATCTTAACTCGCTAGGAGCGAAGGAGCTTATTCCAATTGAGGAGGCACTCAGCAATGGCATCACCAAAGTTAGAGATAAGCAGATGGACCTGTGGAAG------------CTTCTTAAGAAGAAC------------GGGAGGATGCTTGAAGAGGAGAACAAGCGGCTTTCATTTCTACTGCATCAGCAGCAT---TTG------------AGCATGGAT---------GGA---AATGTGAGG---GAATTGGAG---------CTTGGGTAT------CAT---CACAAA------------GACCGCAAT---TACGCTTCC------------------CAGATT---------CCGGTGGCATTTCGAGTC---CAGCCATTC---------------------------------CAGCCAAATTTGCAAGAGAATAAA--------------------------------------- Lilium_longiflorum_LMADS8 ATGGGTCGTGGCAAGATCGAGATCAAGCGGATCGAGAACTCCACCAACCGCCAGGTCACCTTCTCCAAG---CGCCGCAACGGCATCATCAAGAAAGCCCGTGAGATCAGCGTCCTCTGTGAGGCCCAGGTCTCCGTCGTCATCTTCTCCAGCTCCGGCAAGATGTCC------------------------GAGTACTGCAGC---CCC------TCCACCTCTCTACCGAAGATCCTTGAGAGGTATCAGGTG---AACTGCGGC---AAGAAGATCTGGGATCCCAAGCATGAG---CACCTGAGCGCGGAGATTGATAGGATCAAGAAGGAGAATGAT------------AATATGCAGATCCAGCTG------------AGGCATCTGAAGGGAGAGGACCTGAACTCGCTGCAGCCGAAGGAGCTGATCCCAATCGAGGAGGCGCTGGAGAATGGCATCAGGGGCGTCCGGGAGAAGCAGAATGATTTTCTGAGG------------ATGCTCAAGAAGAAT------------GAAAGGATACTGGAAGAGGATAACAAACGGTTAACTTATATACTGCACCATCAGCAA---CTG------------GCAATGGAT---------GAA---AATATGAGG---AACTTGGAA---------TTTGCATAT------CAT---CATAAA------------GATGGGGAT---TTCGGTTCC------------------CAGATG---------CCAATGGCCTTTCGTGTG---CAGCCAATC---------------------------------CAGCCTAATTTACATGAGGACAAG--------------------------------------- Lilium_longiflorum_LMADS9 ATGGGTCGTGGCAAGATCGAAATCAAGCGGATCGAGAACTCCGCCAACCGTCAGGTCACCTTCTCCAAG---CGCCGCAACGGCATCATCAAGAAAGCTCGTGAGCTCAGCGTCCTCTGTGAGGCCCATGTCTCCGTCGTCATCTTCTCCAGCTCCGGCAAGATGTCC------------------------GAGTACTGTAGC---CCC------TCAACCTCCCTACCGAAGATCCTCGAGAGGTACCAGTTG---AACTCCGGC---AAGAAGATCTGGGATGCCAAGCATGAG---CACCTGAGCGCGGAGATTGATAGGATCAAGAAGGAGAATGAT------------AATATGCAGATCGAGCTG------------AGACATCTGAAGGGAGAGGATCTGAACTCACTTCAGCCTAAGGAGCTGATCCCGATCGAGGAGGCACTAGAGAATGGCGTCAGGTGCGTCCGGGAGAAGCAGAATGATGTTCTGAGG------------ATGCTCAAGAAGAAT------------GAAAGAATACTGGAAGAGGATAACAAACGGTTGGCCTATATACTGCACCATCATCAG---CTG------------ACAAGGGGAGAATATGAGGGA------------------------------------------------------------------------------------CATGGAACT------------------TGCATA--------------------------------------------------------------------------------------------------------------------------------------- Lilium_regale_LRGLOA ATGGGCCGCGGCAAGATCGAGATCAAGCGGATCGAGAACTCGACCAATCGCCAGGTCACCTTCTCCAAG---CGCCGCAACGGCATCATCAAGAAAGCCCGTGAGATCAGCGTCCTCTGTGAGGCCCAGGTCTCCGTCGTCATCTTCTCCAGCTCTGGCAAGATGTCC------------------------GAGTACTGCAGC---CCC------TCCACCTCTCTACCGAAGATCCTTGAGAGGTATCAGGTG---AACTGCGGC---AAGAAGATCTGGGATCCCAAGCATGAG---CACCTGAGCGCGGAGATTGATAGGATCAAGAAGGAGAATGAT------------AATATGCAGATCCAGCTG------------AGGCATCTGAAGGGAGAGGATCTGAACTCGCTGCAGCCGAAGGAGCTGATCCCAATCGAGGAGGCGCTGGAGAACGGCATCCGGGGCGTCCGGGAGAAGCAGAATGATTTTCTGAGG------------ATGCTCAAGAAGAAC------------GAAAGGATACTGGAAGAGGATAACAAACGGTTAACTTATATACTGCACCATCAGCAA---CTG------------GCAATGGAT---------GAA---AATATGAGG---AACTTGGAA---------TTTGCATAT------CAT---CATAAA------------GATGGGGAT---TTCAGTTCC------------------CAGATG---------CCAATGGCCTTTCGTGTG---CAGCCAATC---------------------------------CAGCCTAATTTACATGAGGACAAG--------------------------------------- Lilium_regale_LRGLOB ATGGGTCGTGGCAAGATCGAAATCAAGCGGATCGAGAACTCCACCAACCGCCAGGTCACCTTCTCCAAG---CGCCGCAACGGCATCATCAAGAAAGCTCGTGAGCTCAGCGTCCTCTGTGAGGCCCATGTCTCCGTCGTCATCTTCTCCAGCTCCGGCAAGATGTCC------------------------GAGTACTGTAGC---CCC------TCCACCTCCCTACCGAAGATCCTCGAAAGGTACCAGTTG---AACTCCGGC---AAGAAGATCTGGGATGCCAAGCATGAG---CATCTGAGCGCGGAGATTGATAGGATCAAGAAGGAGAATGAT------------AATATGCAGATCGAGCTG------------AGGCATCTGAAGGGAGAGGATCTGAACTCGCTTCAGCCTAAGGAACTGATCCCGATCGAGGAGGCACTAGAGAATGGCGTCAGGGGCGTCCGGGAGAAGCAGAATGATGTTCTGAGG------------ATGCTCAAGAAGAAT------------GAAAGAATACTGGAAGAGGATAACAAACGGTTGGCCTATATACTGCATCATCATCAA---CTG------------ACGAGGGGAGAATATGAGGGA------------------------------------------------------------------------------------CATGGAACT------------------TGCATG--------------------------------------------------------------------------------------------------------------------------------------- Liriodendron_tulipifera_LtPI ATGGGGCGTGGGAAGATAGAGATAAAAAGGATAGAGAACTCCACAAACCGACAGGTGACCTATTCAAAG---AGGAGAGGAGGGATACTGAAGAAAGCAAAGGAGATCACCGTTTTGTGTGACGCGCAGGTCTCCCTCGTCATCTTCTCTAGCACTGGGAAGATTTCC------------------------GAGTACTGTAGT---CCC------TCCACCACGCTGGTGAAGATTTTGGATCGCTACCAGAAG---AGCTCAGGG---AAGAAGCTCTGGGATGCTAAGCACGAG---CATCTTAGCAATGAAGTTGAAAGGATTAAGAAAGAGAATGAT------------AGCATGCAGATCAAGCTC------------AGGCATTTGAAGGGCGAGGATATCACCTCATTGCATCCGAGGGAACTCATCCCTATAGAGGAAGCCCTCCAAAACGGTCTTGCCTGCGTTCGCTCCAAGCAGATGGAGTACTTAAAG------------ATGCTCAAGAAGAAT------------GAAAGAACTCTGGAGGAGGAGAATAAGCGCTTGAGTTATATCCTGCATCAGCAGCAA---CTG------------GCGATGGAT---------GGA---AATGCAAGA---GAAATGGAC---------CACGGTTAT------AAT---CAGAGA------------GAGAGAGAA---TATCATCAG------------------CAGTTG---------CCTTTCACATTCCGCCTG---CAACCCATA---------------------------------CAGCCCAATCTACATCAGAATCAG--------------------------------------- Liriodendron_tulipifera_LtPI2 ATGGGGCGAGGGAAGATCGAAATAAGGAGGATAGAGAACTTGGCAAACCGCCAGGTCACCTACTCGAAG---CGGAGAAATGGCATACTCAAGAAAGCCAAGGAGATCACCGTTTTGTGTGACGCTGAGGTCTCCCTCGTCATCTTCTCCAGCACCGGCAAGATGTCC------------------------GAGTACTGCAGC---TCC------TCTGCTACGTTGATAAAGATGTTGGATCGGTATCAGAAG---GCTACGGGG---AAGAAGCTTTGGGATGCTAAGCATGAG---TTTCTGAGCAAGGAGGTTGATAGAATCAAGAAAGAGAACGAT------------AGCATGCGGATGAAGCTC------------AGGCACTTGAAGGGCGAGGATCTGACATCACTGCATCCAAAGGAACTGATCCCCATTGAGGAAGCTCTCCAAGATGGTCTCACCAATGTTCGATCTAGGCAGGTTGAGCTGTGGAAG------------ATGCTACAGAAAAAT------------GAAAGAAAATTGGAGGATGAGAACAAGCACTTGAGTTATATCTTGCGTCATCAGCAG---TTG------------GTAATGGAT---------ATG---AATGAGAGA---GAGATGGGT---------TATGGGTAT------CAT---GAGAGA------------GAAAGCGAG---TATCCTTTG------------------CACGTG---------CCTTGTGCCTTCCGCGTG---CAGCCAATC---------------------------------CAGCCCAACTTGCAGAACAAA------------------------------------------ Medicago_truncatula_MtNGL9 ATGGGAAGAGGAAAGATTGAGATCAAGAGGATTGAGAACTCAAGCAATAGACAAGTTACATATTCAAAG---AGAAAAAGCGGGATTTTAAAGAAAGCTAAAGAAATCAATGTTCTATGTGATGCTCAAGTTTCCACTATCATCATTGCTCCTTCTGGAAAAATGCAT------------------------GAATACATTAGC---CCT------TCTACCACGTTGATTGATATGCTGGAGAGATATCATAAA---GCATCTGGA---AAGAGGCTTTGGGATGCCAAACATGAG---AACTTAAAGAATGAAATTGAGAAACTCAAGAAAGAGAATGAG------------GACATGCAAATTCAGCTC------------AGGCACTTGAAGGGAAAGGATATCAACACACTAAACTACAAGAAGTTGATGAGCTTAGAGGATGTCTTAGAAAATGGTCTCCTCACTGTCCGTCACAAACAGATGGAAGTATACAAG------------ATGGTCAAGAGAAAC------------GACAAGATCTTGAAAGAAGAGAATAGGGAACTTAATTTTATCCTCCAGCAGCAACAAGGGTAT------------------------------GGC---AGTGGAAGGTGGGAGATAAAT---------------------------------------------------------------------------------------GGATTA--------------------------------------------------------------------------------------------------------------------------------------- Medicago_truncatula_MtPI ATGGGAAGAGGTAAGATTGAGATCAAGAGGATTGAAAACTCAAGCAACAGGCAAGTTACTTATTCAAAG---AGAAAGAATGGAATCCTTAAGAAAGCAAAGGAAATAAGTGTTCTTTGTGATGCTCAAGTTTCCCTTATTCTCTTTGGTGCTTCTGGAAAGATGCAT------------------------GAATACATCAGC---CCT------TCTACCACGTTGATTGATATTCTGGACAGATACCAGAGA---GCCTCTGGG---AAAACCCTATGGGATGCTAAGCATGAG---AACCTTAGCAATGAAATTGATAGAATCAAAAAGGAGAATGAT------------AGCATGCAAATTGATCTC------------AGGCACTTGAAGGGAGAGGATATTACCTCACTGAATTACAAAGAGCTGATGGCCCTTGAGGAATCCCTTGAAAATGGTCTTACTGGCGTCCGTGACAAAAAGATGGAAGTGCATAGG------------ATGTTCAAGAGAAAT------------GGAAAAATCTTGGAGGATGAAAATAAGGAACTCAATTTTCTTCTGCAACAGCAT------ATG------------GCACTTGAAGGT---GTGGGA---AACATGCATGGACAATGGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Nicotiana_benthamiana_NbGLO1 ATT---------------------------------------------------------------------CGCCCTTCAAGTCTA---------GATAAGGAAATTAGTGTTCTTTGTGATGCTCGTGTTTCTGTCATCATTTTTGCTAGTACTGGCAAGATGCAT------------------------GAGTTCTCC---------------TCTACTCCGTTGGTTGATATTTTGGATCAATACCACAAG---CTTACTGGG---AGAAGATTGTGGGATGCTAAGTATGAG---AACATGGACAATGAAATCAACAAAGTCAAGAAGGACAATGAC------------AACATGCAAATTGAACTC------------AGGCACCTAAAGGGGGAAGACATAACATCTTTGAACCACAGAGATCTCATGATGTTGGAAGATGCCCTTGATAATGGACTCACTAGTATCCGTAACAAGCAGAATGAGCTTCTGAGG------------ATGATGAGGAAAAAG------------ACTCAAAGTATGGAAGAGGAGCAAGACCAACTTAATTGCCAATTGCGGCAACTAGAG---ATA------------GCAAGCATGAAT------AGG---AATATGGGA---GAAATAGGG---------GAAGTGTTT------CAG---CAAAGG------------GAGAATGAA---TACCAAACT------------------CAGATG---------CCTTTTGCCTTCCGAGTT---CAACCAATG---------------------------------CAGCCTAATTTGCAGGAGAGGTTC--------------------------------------- Nicotiana_benthamiana_NbGLO2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACCGAATCAAGAAAGAGAATGAC------------AGTATGCAGGTTAACCTC------------ATGCACCTTAAAGGAGAAGATATCAATTCTCTGAACCACAAAGAGCTTATGGTTATGGAAGAAGCCTTACAAAATGGGCTTTCTAGTATCAGTGCCAAACAGTCTGAGATCTTGAGG------------ATGGTCAGGAAAAAT------------GACCAAATTCTGGAGGAGGAACATAAGCAACTTCAATATGCTTCGCACCAAAAGGAG---ATG------------GCAGCCATGGGC------GGA---AACATGAGA---GTGATTCAAGAG------GAAGTTTAC------CAT---CAAAGA------------GACAGAGAT---TACGAGTAC------------------CAGATG---------CCATTTTCCCTGCGAGTT---CAGCCAATG---------------------------------CAGCCAAACCTACATGAAAGAATG--------------------------------------- Nuphar_advena_Nu.ad.PI1 ATGGGGAGAGGAAAGATTGAGATCAAGAGGATAGAGAATGCTTCCAACAGGCAGGTCACCTTCTCCAAG---AGGAAACAGGGTATCTTGAAGAAGGCCAAGGAGATCAGTGTTCTCTGTGACGCTCAGGTCTCTCTCATCTTGTTCTCTAGTGCTGGCAAGCTCTAC------------------------GATTATTGCTCC---CCT------TCTAGCAGTTTGAAGGACATTCTGACTAGATACCAGAAG---TCTTCTGGG---AAGAAGTTGTGGGATGCTAGACATGAG---TATCTGAGCACAGAGTTAGACAGGATTAGGAAGGAGAATGAA------------AATATGCAAATTGAACTC------------AGGCATTTTATGGGTGAAGATCTGAGTTCACTGACCGTTCAAGAGCTTCGAGCTCTTGAAGACTCTCTTCAGATTGGCTTTGATAATGTTCACGTCAAGCAGACCGAATGCCTGAACAATGATATTCAAATTCTGAAGAAGAAT------------GAGAGGATCCTTGAGGAGGAGAATAGGCAGATGAAATATATACTGCATCAACAAGAG---CAA------------ATGGCACTGCGT------------GAGTTGAGA---GACATCGAC---------CTTGGAAGT------AAT---AATAAA------------GGGAAGGGT---TACCCTTCA------------------CAATCAGGGCTGCAACCATTTGGATGTCGTGTG---CAGCCTATC---------------------------------CAGCCTAATTTGCAGCACAACAAA--------------------------------------- Nuphar_advena_Nu.ad.PI2 ATGGGGAGAGGAAAGATTGAGATCAAGAGGATAGAGAATGCTTCCAACAGGCAGGTCACCTTCTCCAAG---AGGAAACAGGGTATCTTGAAGAAGGCCAAGGAGATCAGTGTTCTCTGTGATTCTCAGGTCTCTCTCATCTTGTTCTCCAGTGCTGGCAAGCTCTAC------------------------GAGTATTGCTCC---CCT------TCTAGCAGTTTGAAGGACGTTCTGACTAGATACCAGAAG---TCTTCTGGG---AAGAAGTTGTGGGATGCTAGACATGAG---TATCTGAGCACAGAGTTAGACAGGATTAGGAAGGAGAATGAA------------AATATGCAGATTGAACTC------------AGGCATTTCATGGGTGAAGATCTGAGCTCACTTACCGTTCAAGAGCTTCGAGCTCTTGAAGACTCTCTTCAGATTGGCTTTGATAGTGTGCACATAAAGCAGACAGAATGCCTGAACAATGATATTCAAATTCTGAAGAAGAAT------------GAGAGGATCCTCGAGGAGGAGAATAGGCAGCTGAAATATATACTGCATCAACAAGAG---CAA------------ATTGCACTGCGT------------GAGCTGAGA---GACATCGAC---------CTTGGAAGT------AAT---AAAAAA------------GGAAAGGGA---TACCCTTCA------------------CAATCAGGGGTGCAACCATTTGGATTTCGTGTG---CAGCCTATC---------------------------------CAGCCTAATTTGCAGCACAACAAA--------------------------------------- Oncidium_Gower_Ramsey_OMADS8 ATGGGGCGCGGAAAGATAGAGATCAAGCGGATCGAAAACTCCACAAATCGGCAAGTTACATTTTCGAAG---CGGCGAAATGGAATCATGAAGAAGGCGAAGGAGATCAGCGTGCTCTGCGATGCACAGGTCTCGCTTGTTATCTTTTCAAGCCTTGGAAAGATGTTT------------------------GAGTATTGCAGT---CCA------TCGACAACGTTGTCGAAGATGTTGGAGAAATACCAGCAG---AACTCGGGA---AAGAAACTCTGGGATGCGAAACACGAG---AACTTGAGCGCGGAGATCGATCGGATCAAAAAGGAGAATGAT------------AATATGCAGATCGAACTC------------AGGCATTTGAAAGGGGAAGATCTGAACTCTCTTAACCCGAAAGAGCTTATTCCGATTGAGGAAGCTCTACAGAATGGGCTTACTGGTGTTCGGGATAAACAGATGGACTTCTTGAAG------------ATGCTAAAAAAGAAT------------GAAAGAATGCTTGAAGAGGAAAATAAAAGACTCGCATACTTACTGCACCATCAGCAA---TTG------------GCAATGGAA---------GGC---AGCATGAGA---GAACTGGAT---------ATCGGATTT------CAT---CAGAAA------------GATAGGGAA---TATGCAGCT------------------CAGATG---------CCGATGACCTTTCGAGTT---CAACCCATT---------------------------------CAGCCCAACTTGCAGGGAAACAAG--------------------------------------- Oryza_sativa_OsMADS2 ATGGGGCGCGGGAAGATCGAGATCAAGAGGATCGAGAACTCCACCAACCGCCAGGTGACCTTCTCCAAG---CGCAGGAGCGGGATCCTCAAGAAGGCCCGCGAGATCAGCGTCCTGTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTAC------------------------GACTACTGCTCC---CCC------AAGACCTCGCTATCAAGAATCTTGGAGAAGTACCAGACC---AATTCCGGA---AAGATACTGTGGGATGAGAAGCACAAG---AGCCTTAGCGCGGAGATTGATCGAATCAAGAAAGAGAACGAT------------AATATGCAGATTGAGCTC------------AGGCACTTGAAAGGTGAAGATCTAAACTCTCTGCAGCCCAAAGAGCTCATCATGATTGAGGAGGCACTTGACAATGGGATAGTGAACGTGAATGATAAACTGATGGACCACTGGGAA------------AGGCACGTGAGAACT------------GATAAGATGCTGGAAGACGAGAACAAGCTGCTGGCTTTTAAACTGCACCAGCAAGAT---ATA------------GCGCTGAGC---------GGG---AGCATGAGG---GATCTTGAG---------CTTGGGTAC------------CATCCA------------GACAGGGAC---TTTGCGGCC------------------CAGATG---------CCGATCACCTTCCGCGTG---CAGCCCAGC---------------------------------CACCCCAACCTGCAGGAGAACAAT--------------------------------------- Oryza_sativa_OsMADS4 ATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAG---CGCCGCTCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACCGCGAGGTCGGGGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCC------------------------GACTACTGCACG---CCC------AAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACC---AACTCCGGG---AAGATACTCTGGGATGAGAAGCACAAG---AGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGAC------------AACATGCAGATCGAGCTC------------AGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGG------------ATGCATAAAAGGAAT------------GAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAG---GTC------------GAGCTGAGC---------GGC---GGCATAAGG---GAGCTGGAG---------CTCGGCTAC------CAC---CACGAC------------GACAGGGAC---TTCGCGGCC------------------TCGATG---------CCGTTCACCTTCAGGGTG---CAGCCCAGC---------------------------------CACCCCAACCTCCAGCAGGAGAAG--------------------------------------- Osmanthus_fragrans__OfGLO ------------------------------------------------------------------------------AGTGGGATAATGAAAAAAGCAAAGGAAATAAGTGTTCTTTGTGATGCTCAAGTTTCTGTTGTCATCTTTGCTAGTTCTGGCAAGATGCAT------------------------GAATTTTGTAGC---CCT------TCTACTACGTTAATTGACATGTTGGATCAGTACCATAAA---CTCTCTGGG---AAGAAGCTCTGGGATGCTAAGCATGAG---CATTTGGACAATGAAATCAACAGAATCAAGAAAGATAATGAC------------AGGATGCAGACTGAACTC------------AGGCGTCTGAGTGGAGAGGACATAACAACTTTGAACTACAAAGAGCTTATGGTCTTAGAGGAAGCTCTTGAAAATGGGATTTCAAGTCTCAAAGCCAAACAGATGGAGTGTGTGCCG------------ATGATGAGGAAACAT------------AATGAAATGCTGGAGGACGAGAACCGGGGGCTCCAGTTCAAGCTGCGGCAAATGCAT---TTG------------AATCCGATGGAT------GATCAAAACGTGTTA---GAAAATGGC---------GACGTTTAT------CATCATCAACAGGGA---------GTTGGAGAC---TACGAATAC------------------CAAATG---------CCTTTTGCCTTCCGCGTG---CAGCCAATG---------------------------------CAGCCTAATTTACAGGATCGTTTC--------------------------------------- Pachysandra_terminalis_PAtePI ATGGGGAGAGGGAAGATTGACATCAAGAGAATAGAGAACCCCACTAACAGGCAGGTGACTTTCTCAAAG---AGGAAAAATGGGATCTTAAAGAAGGCTAAGGAGATCACTGTTCTTTGTGATGCTAAGGTTGCTCTTCTTATCATCTCTAGTTCTGGGAAGATCATT------------------------GATTACTGTAGC---CCT------AATACTAATTTGATAGACATGCTGGCTCAGTTCCAGAGC---TCGTCTGGG---AAAAGGTTGTGGGATGCCAAGCATGAG---TATCTCAACAGCGAAATCGAGAGAATCAGGAAAGAGAATGAT------------ACCATGCAGATCAAGCTC------------AGGCATCCCAAGGGTGAGGATATTTTAAATTTGTCTTACAAAGATTGCATGTGCATAGAGGAAGCCCTCGAAGACGGTCTCGAGAAAGTTCGTTCCAAGCGGATTGAGAAGTTCAAA------------ATACATAAGCAGAAG------------GAACAAGAGTTAGAGGAAGAGAATAGGCACCTATTCAACATCTTGCATCAGCAACAG---ATG------------ATAATGGAAGGC------------AATGCTAGA---GGGATGGAG---------AATGTGTAT------CGTCACGAGGTG------------AAGGACGAC---TATCCTCCT------------------CAAATG---------CCGTTCGCCTTCCGCGTT---TTGCCATCC---------------------------------CATCCCAATTTACAGGAGAGGAAG--------------------------------------- 'Papaver somniferum PapsPI-1' ATGGGTAGAGGTAAGATTGAGATCAAGAGGATTGAGAACTCAACAAACAGACAAGTGACTTACTCAAAG---AGGAAAAATGGGATCTTGAAGAAGGCTAGAGAGATCACAGTTCTTTGTGATGCCGATGTTTCTCTTGTTATCTTCTCTAGTACTGGGAAAATGAAT------------------------GAATATTGT---------------AGCTCTCCGTTGATAAAGCAATTGGATAGGTACCAGAAA---GCTTCAGGG---AACAAATTATGGGATGCTAAGCATGAG---TATCTCAGTGCTGAAGTGGATAGAGTCAAGAAAGAGAACGAC------------AACATGCAGATCGAGCTC------------AGGCACCTGAAAGGCGAGGATCTGACCCCCTTGAACCCAAGAGAGCTAATACCAATTGAAGCTGCCCTTGAGGATGGTCTTGTTGGCGTTAAGGCCAAAATTAAGGAGCACCGTAGA------------GCACTTGAGAAAAAA------------ACTAGGATGTTAGAGGAGGAAAATAAGCGCCTCATTGCCAAACTACAACAAGTGGAA---ATT------------CATGGAAGAGGG------------GAGATGGACACTGGGGCAAAT---------AACGGGTAT------AATAATCAGAAAGCAGCAGATGGAACCAGGGAT---TACCCGTCTCATAACGATAATCATCATCAGGTG---------CCATTCGCCTTCCAGATG---CAGCCAATT---------------------------------CAGTCTAATCTCACCACGGCCACCACCAACAACAACAACAACAAATACCAGCTACTAGAT--- 'Papaver somniferum PapsPI-2' ATGGGTAGAGGAAAGATTGAGATTAAGAGGATTGAGAACTCAACAAACAGACAGGTGACTTTCGCAAAG---AGGAAAAATGGGTTGTTGAAGAAAGCTAGAGAGATTTCCATTCTCTGTGATGCTGATGTTTCTGTTGTTATGTTCTCTGAAGCTGGAAATATGACT------------------------GAATACTCT---------------AGTTCTCCGTTGATTGAGCAATTAGCTAGATATCAGAAA---GAATCAGGG---AAAACATTATGGGATGTTAAGCATGAG---CGTCTCAGCGCTGAAATCGATAGAGTCAGGAAAGAGAACAGC------------AATTTGCAGATCGAGATA------------AGGCACCTGAAAGGTGAGGATCTGAAGCCCCTATCTCCTCAGGAGCTTCATGCCTTAGAAAATGCCCTTGAAGATGGATATGCTTGTCCTCGTGCCAAAATTAAGGAGCACCATAGA------------AAACTCAAGAAAAAT------------GGAAGACTGTTAGAGGAGGAAAATAAGCGTCTCAGTTTCACTTATCAGCAGCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAAATGGAACATGGGAGCAATG Petunia_hybrida_PHGLO1 ATGGGGAGAGGAAAGATAGAGATAAAGAGAATAGAGAACTCTAGCAACAGGCAAGTTACTTACTCCAAG---AGAAGAAATGGGATTATCAAGAAAGCTAAAGAAATCACTGTTCTTTGTGATGCTAAGGTTTCCCTTATCATCTTTGGTAATTCTGGCAAGATGCAT------------------------GAATATTGTAGC---CCT------TCTACTACGTTACCTGATATGCTGGATGGTTATCAAAAA---ACTTCTGGG---AGGAGGCTATGGGATGCTAAGCATGAG---AACTTGAGCAATGAAATCGATAGAATCAAGAAAGAGAACGAC------------AATATGCAAGTTAAGCTC------------AGGCACCTCAAAGGAGAAGATATCAATTCTTTGAACCACAAAGAGCTTATGGTTTTGGAAGAAGGCTTAACAAATGGACTTTCTAGTATCAGTGCCAAGCAGTCGGAGATCTTGAGG------------ATGGTCAGGAAAAAT------------GATCAAATTCTGGAGGAGGAACACAAGCAACTTCAATATGCTTTGCACCAAAAGGAG---ATG------------GCAGCCATGGGT------GGA---AATATGAGA---ATGATTGAA---------GAAGTGTAC------CAT---CAAAGA------------GACAGGGAT---TACGAATACCAG---------------CAGATG---------CCATTTGCCCTTCGAGTT---CAGCCAATG---------------------------------CAGCCAAATCTACATGAAAGAATG--------------------------------------- Petunia_hybrida_PHGLO2 ATGGGGAGAGGAAAGATAGAGATAAAAAGAATAGAAAACTCAAGCAACAGACAAGTAACTTACTCAAAA---AGAAGAAATGGGATCTTGAAAAAAGCTAAGGAAATTAGTGTTCTTTGTGATGCTCGTGTTTCTGTTATCATTTTTGCTAGCTCTGGCAAGATGCAT------------------------GAGTTCTCT---------------TCTACTTCGTTGGTTGATATTTTGGATCAATATCACAAG---CTTACTGGT---AGAAGATTGTGGGATGCTAAGCATGAG---AACTTGGACAATGAAATCAACAAAGTCAAGAAAGACAATGAC------------AACATGCAAATTGAACTC------------AGGCACTTGAAGGGTGAAGATATCACATCTTTGAACCATAGAGAGCTCATGATATTGGAAGATGCCCTTGAAAATGGACTCACTAGTATTCGTAACAAACAGAATGAGGTTCTGAGG------------ATGATGAGGAAAAAG------------ACTCAAAGTATGGAGGAGGAGCAAGACCAACTTAATTGCCAATTGCGCCAACTTGAG---ATA------------GCAACCATGAAT------AGG---AATATGGGA---GAAATTGGC---------GAAGTGTTT------CAG---CAGAGGGAG---------AATCATGAC---TACCAAAAC------------------CATATG---------CCTTTTGCCTTCCGAGTA---CAACCAATG---------------------------------CAGCCAAATTTGCAGGAGAGGTTG--------------------------------------- Phalaenopsis_equestris_PeMADS6 ATGGGTCGGGGAAAGATAGAGATCAAGAGAATCGAGAACTCAACCAACCGGCAAGTGACCTTCTCGAAG---AGGCGGAATGGAATCATGAAGAAGGCGAAGGAGATCAGCGTGCTCTGCGACGCCCAGGTTTCGCTTGTCATCTTTTCCAGCCTTGGAAAGATGTTT------------------------GAGTATTGTAGC---CCA------TCCACCACGCTGTCGAAGATGCTGGAGAAATACCAGCAG---AACTCGGGG---AAGAAGCTCTGGGACGCCAAGCACGAG---AACTTGAGCGCGGAGATTGATCGTATCAAGAAGGAAAATGAT------------AATATGCAGATCGAACTC------------AGGCATTTGAAAGGGGAGGATCTGAACTCTCTTAACCCAAAAGAGCTTATTCCGATTGAGGAAGCCCTGCAGAATGGTCTCACCAGCGTTCGGGATAAACAAATGGACTACTTGAAG------------ATGCTAAAAAAGAAT------------GAAAGGATGCTTGAAGATGAAAATAAAAGGCTCACATACCTATTGCACCAACAACAA---ATG------------GCAATGGAA---------GGG---AGTATGAGA---GAACTCGAC---------ATCGGCTAT------CAT---CATAAA------------GATCGCGAG---TATGCGGCT------------------CAGATG---------CCAATGACTTTTCGTGTC---CAACCCATT---------------------------------CAGCCCAACTTGCAGGGAAATAAG--------------------------------------- Picea_abies_DAL11 ATGGGGAGGGGGAAGATTGAAATAAAGATGATTGAGAACGAATCAAACAGGAAAGTCACATTCTCCAAG---CGGAGAGGAGGTCTTTTTAAGAAAGCTCGGGAACTCTCCGTCTTGTGTGAGGCAGAAGTCGCTCTCATCGTTTTCTCCAGCACTGGCAACCACCAG------------------------GAATTTGCA---------------AGCTCTAGCATGAAGAATATTTTGGAGAGATATAAAGCG---TCCACAGGA---ATAGGCCTTCTTGATTATCAAGATCAA---ATGCTTTCT---GACATGGCACAGATCAAGAGAGAAAATGAA------------ATCCTTCATGCTGAATTA------------AGGTACATGATGGGCGAGGACCTCGACTCGTCGGACATCAAAGACATGATGAGTTTGGAGGATCATCTTGATAAAGTGTCAGGCCTTGTTCGAAAAAGAAAGGATAAACTTATGGACAAC------------------------------------AGACTAGAGCTCCAAAAGAAAAAGACCGGGTTGGAGTGGCAGATACACAATCAACTGAATGAAAACATTGCCTGTTATCATCGTGCAAGAATGGAAGAGCAGGATAAGCATGACCTTTAT---------AGTAACTATGGATTTTACCAGCTGGAG------------------------AGACCATCTACTCCTCTTCATGCGCTGCCTCCT---------GATCCTGAACTTCGTTTG---CAGCCGAAC---------------------------------CAGCCTAACTTGAAAGACAGTGGCTAT------------------------------------ Picea_abies_DAL12 ATGGGGAGGGGAAAGATAGAGATAAAGAAGATTGAGAACTTGACGAACAGGCAAGTAACGTTCTCTAAG---CGCAAGGCTGGGCTTCAGAAGAAAGCAAAGGAGCTTTCTATTTTATGTTCTGCTGAAGTTGCTCTTATTATTTTCTCTAGCAGTGGAAAACATTAT------------------------GAGTATTCAAGC---CCT------TGCAGTAGCGTGGAGCAAATTGTGGAGAAATATATGAAT---GTCTCTGGA---AGTAAACTGGGCGAAGATCAA------------ATTAATACATTAATCGATGGCTGTGTTGTCAAGGGCGACATTGAGATTGTGGGGCTACGTCGGGTTATC------------AGACATCTGACGGGAGGGGATTTGGAGTCTTTGTCTGTGAATGAACTGCAAAAACTTGAAGACCAACTTGAAATCGTAACATCTAGGGTACGAAAGAAGAGGTTTCAACGCATGCAAGAG---------CAGCTCGAGGCTATG------------ACACAAGAGCTTGAGGAATCCAAAAGAAGACTAAGATATAATGAGGGTTTTACACAA---AAGAAAAATGACCTGTATATGTTCTCC------------GACTGTCGTCGATCGCTGGGAGAGACTGTGGACGACTATCCATTTTGTCAATTAGAAGAT---------AAAAACCCTATTTACGTGACA------------------CCTTCG---------GCGCCTGTATTTTGTGTG---CAGCCAGGT---------------------------------CAACCGCACTTGCATGAAACTGACTATCGATATCTTGATCTAAAGTTGGGGTATAACAGAAAT Picea_abies_DAL13 ATGGGGAGGGGAAAGATTGAAATAAAAATGATTGAGAACCCAACAAACAGGCAAGTCACATTCTCTAAG---AGAAGAGGGGGACTTACTAAGAAAGCTCAGGAGCTCTCGGTCTTATGCAATGCAGAAGTTGCTCTGATCGTTTTTTCAAACACTGGCAAACTCCAT------------------------CAGTGGTCA---------------AGCTCCAGCATGAAGAAGGTTCTCGAGAGATACCAGAAATCGGAACAGGGA---CTAGGACTTATGGACTATCAACATCAA---CAGCTGTTGTTTGAAATGAGACGAATCACCAAAGAAAATGAA------------AGTCTTCAAGCTCGTTTAAGAATCCTGTACAGGCATATGAGGGGCGAGGACATCAACTCGTTGAAGCTTCCCGAGCTGTTCAATCTCGAAAAGCAGCCTGAACTGGCGGGCACCCAAGTTCGAAGAAGAAAGGATCATGTTTTAGACAATGAAAAAATCAAGGGAAAGAACAAG------------GAGCGTCGTTTGCAACAAGAGAACATGATTCTACAGGAAATGGTTGACCAGCATCAC---------------------------GGACATATGGAAGAGGATAACGGC---GAGATTAAT------------------------------------------------TTCGTACTTTGCCAACCATTAAAGAGACTGAGTGCTGCTTTTCCT---------GCACCACTACTCCGTCTG---CAGCCAAAC---------------------------------CAACCGAACTTGCAGGATATTGGATAT------------------------------------ Solanum_lycopersicum_TPI ATGGGGAGAGGTAAAATAGAGATAAAGAGAATAGAAAACACAAACAACAGGCAAGTAACTTATTCAAAA---AGAAGAAATGGTATAATAAAGAAAGCTAAAGAAATTACTGTTCTTTGTGAAGCTAAGGTTTCACTTATAATCTTTGCTAGTTCTGGAAAGATGCAT------------------------GAATATTGTAGC---CCT------TCTACTACGATAAGTGATATGTTGGATGGTTATCAAAAA---GCTTCTGGG---AGGAGACTATGGGATGCTAAGCATGGG---AATTTGAGTAATGAAATTGATAGAATCAAGAAAGAGAATGAC------------AGTATGCAGGTTAAGCTC------------AGGCACCTCAAAGGAGAAGATATCAATCAACTTACCCATAAAGAGCTTATAATTATGGAAGAAGCCTTACAAAATGGACTTTCTAGTATCAGTGCCAAGCAGTCTGAAATCTTGAGG------------ATGGTCAGGAAAAAT------------GATCAAATT?TGGAGGAGGAAAATAAGCAACTTCAATATGCTTTGCACCAAAAGGAG---ATG------------GGAGCCATTGGTGGAAGTGGA---AATATGAGA---GGAATTCATGAA------GAAGTGTAT------CAT---CAAAGA------------GAAAGGGAT---TATGAGTAC------------------CAAATG---------CCATTTGGCCTACGAGTTCATCAGCCAATG---------------------------------CAGCCAAATCTACATGAAAGAATG--------------------------------------- Taihangia_rupestris_TrPI ATGGGGAGAGGTAAGATTGAGATCAAAAGGATAGAGAACTCAAGCAACAGACAGGTGACTTATACAAAG---AGAAGAAATGGGATCATAAAGAAGGCTAAGGAAATCACTGTTCTCTGTGATGCTAAAGTTTTTGTTATCATCGTTCCTAGCTCTGGAAAAATGGTT------------------------GATTTCCGCAGCGGTCCC------AAGGAAACACTGCTGAAACTCTTGGACAAGTATCACGCA---CAGGGGGGA---AATAAGTTATGGGATCAAAAGCATGAG---AACCTCTTCATTGAAATAGATAAGGTCAGGAAAGAGAATGAC------------GGCATGCAAATCGAGCTC------------AGGCATATGAAAGGAGAAGACATATCATCTCTGAGCCATTTGGACCTAATGAGCTTAGAGGAAGCACTGGAAATTGGCCTCTCAAGTATCAGAGACAAAAAGGCACAACATCTGGAC------------GCGGTTATAGATAAT------------ACAAGAGCTGTGGAGGATGAGAATAAGCGCCTCCGATATGAGCTGCACAAACGGGGA---AAA------------ACTGAAGAGAAC------------ATGATGGAGATGGAGATGGAA---------GATGGGTAT------CAT---CAGAAA------------------------ATGCAGGGT------------------AACTAC---------AACGTTGTCTTCCGTGTC---CAGCCTAAT---------------------------------CAGCCTAATCTCCACGACCGAATG--------------------------------------- Tulipa_gesneriana_TGGLO ATGGGCCGCGGCAAGATCGAAATCAAGCGCATCGAGAACTCCACCAACCGCCAGGTCACCTTCTCCAAG---CGCCGCAACGGGATCATCAAGAAGGCGAGGGAGATCAGCGTGCTGTGCGACGCCTGGGTCTCTGTCGTCATATTCTCCAGCTCCGGGAAGATGTCC------------------------GAGTACTGCAGC---CCC------ACCATCACGCTACCGAAGATGCTGGACAAGTACCAGCAG---AACTGCGGG---AACAAGCTCTGGGACGCCAAGCACCAG---AATCTGAGCGAGGAGATTGATAGGATCAAGAAGGAGAACGAC------------AACATGCAGATAGAGCTG------------AGGCATCTGAAGGGGGAGGATCTGAACTCGCTGCAGCCCAAGGAGCTGATCCCGATTGAGGAGGCGCTGGAGAACGGTTTCAGGAGCGTGAGGGAGAAGCAGGATGATGTGCTGATG------------ACGAGGAAGAAGAAT------------ATGAGGCTGATGGAGGAGGATAACAAACGGCTGAATTATGTACTGCATCACCAGCAACAACAG------------GCAATGGAT---------GAA---AATATAAGG---GACATGGAG---------CTTGCCTAT------CAT---CAGAAA------------CATAGGGAA---TTCAATTCC------------------CAGATG---------CCAATGACGTTCCGTGTG---CAGCCAATT---------------------------------CAGCCTAATTTGCATGAGAACAAG--------------------------------------- Vitis_vinifera_VviPI ATGGGGAGAGGGAAGATTGAGATCAAGAGGATCGAGAACTCAAGCAACAGGCAGGTGACCTACTCAAAG---AGGAGAAATGGGATCATGAAGAAGGCCAAGGAGATCACTGTTCTCTGCGATGCTCATGTCTCTCTTGTTATCTTTGCTAGCTCTGGAAAGATGCAC------------------------GAGTACTGTAGC---CCT------TCTACAACGTTGATTGATATCTTGGATAGGTATCACAAG---CAGTCTGGG---AAGAGGCTCTGGGATGCAAAACATGAA---AATCTCAGCAATGAATTGGATAGGATCAAAAAGGAGAATGAT------------AGCATGCAGATTGAACTC------------AGGCACCTGAAGGGGGAGGATATCTCATCTCTGCACCACAAAGAACTCATGGCCATTGAGGATGCCCTTGAGATTGGCCTTGCAAGTGTTCGCAACAAACAGATGGAATTCTACAAG------------ATGGTCAAGAAAAAT------------CAACGAATCCTGGAGGAGGAGAACAAGCACCTCAATTACATCGTGCACCACCAGGGT---ATG------------CCCATGGAGGCG------GGC---AATGTGAGA---GAGGTGGAA---------AGTGGATAT------CAT---CAGAGAGCT---------GTGAGGGAC---TACAATCCC------------------CAGATG---------CCTTTCGCCTTCCGGGTG---CAGCCAATT---------------------------------CAGCCAAACTTACAGGAGAGGATA--------------------------------------- Zea_mays_ZMM16 ATGGGGCGCGGCAAGATCGAGATCAAGCGGATCGAGAACTCCACCAACCGCCAGGTGACCTTCTCCAAG---CGCCGCAACGGGATCCTCAAGAAGGCGCGGGAGATCAGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCGTCTTCTCCAGCGCCGGCAAGCTTTAC------------------------GACTACTGCTCC---CCG------AAGACATCGCTATCAAAAATCCTGGAGAAGTACCAGACC---AACTCTGGA---AAGATACTGTGGGGTGAGAAGCACAAG---AGCCTTAGTGCAGAGATTGACCGTATAAAGAAAGAGAACGAC------------ACCATGCAGATCGAGCTC------------AGGCACCTGAAAGGTGAAGATCTAAACTCGCTGCAACCCAAAGACCTGATCATGATCGAGGAGGCACTTGATAATGGACTGACGAACCTGAATGAGAAACTGATGGAGCACTGGGAA------------AGGCGTGTGACAAAC------------ACTAAGATGATGGAAGACGAGAACAAATTGCTGGCCTTCAAACTCCACCAGCAAGAT---ATC------------GCGCTGAGC---------GGC---AGCATGAGA---GAGCTTGAG---------CTGGGTTAC------------CATCCT------------GACCGGGAC---CTGGCGGCC------------------CAGATG---------CCAATCACCTTCCGCGTG---CAGCCCAGC---------------------------------CATCCCAACTTGCAGGAGAACAAT--------------------------------------- ; END; BEGIN TREES; Title 'Trees from "GLO 4by4.nex"'; LINK Taxa = Taxa; TRANSLATE 1 Akebia_trifoliata_AktPI, 2 Amborella_trichopoda_AmPI, 3 Antirrhinum_majus_GLO, 4 Aquilegia_vulgaris_AqvPI, 5 Arabidopsis_thaliana_PI, 6 'Brassica napus BnPI-1', 7 'Brassica napus BnPI-2', 8 'Brassica napus BnPI-3', 9 Camellia_japonica_CjGLO1, 10 Camellia_japonica_CjGLO2, 11 Chloranthus_spicatus_CsPI, 12 Chrysanthemum_grandiflorum_CDM86, 13 Davidia_involucrata_DiGLO1, 14 Davidia_involucrata_DiGLO2, 15 Eschscholzia_californica_SEI, 16 Euptelea_pleiospermum_EUplPI, 17 Gerbera_hybrida_GGLO1, 18 Gnetum_gnemon_GGM15, 19 Gnetum_gnemon_GGM2, 20 'Hedyosmum orientale HoPI_1', 21 'Hedyosmum orientale HoPI_1A', 22 'Hedyosmum orientale HoPI_1B', 23 'Hedyosmum orientale HoPI_2', 24 'Hedyosmum orientale HoPI_3', 25 Impatiens_hawkeri_IhGLO, 26 Joinvillea_ascendens_JaPI, 27 'Lacandonia schismatica Ls-PI', 28 Lilium_longiflorum_LMADS8, 29 Lilium_longiflorum_LMADS9, 30 Lilium_regale_LRGLOA, 31 Lilium_regale_LRGLOB, 32 Liriodendron_tulipifera_LtPI, 33 Liriodendron_tulipifera_LtPI2, 34 Medicago_truncatula_MtNGL9, 35 Medicago_truncatula_MtPI, 36 Nicotiana_benthamiana_NbGLO1, 37 Nicotiana_benthamiana_NbGLO2, 38 Nuphar_advena_Nu.ad.PI1, 39 Nuphar_advena_Nu.ad.PI2, 40 Oncidium_Gower_Ramsey_OMADS8, 41 Oryza_sativa_OsMADS2, 42 Oryza_sativa_OsMADS4, 43 Osmanthus_fragrans__OfGLO, 44 Pachysandra_terminalis_PAtePI, 45 'Papaver somniferum PapsPI-1', 46 'Papaver somniferum PapsPI-2', 47 Petunia_hybrida_PHGLO1, 48 Petunia_hybrida_PHGLO2, 49 Phalaenopsis_equestris_PeMADS6, 50 Picea_abies_DAL11, 51 Picea_abies_DAL12, 52 Picea_abies_DAL13, 53 Solanum_lycopersicum_TPI, 54 Taihangia_rupestris_TrPI, 55 Tulipa_gesneriana_TGGLO, 56 Vitis_vinifera_VviPI, 57 Zea_mays_ZMM16; TREE 'GLO-like phylogenetic tree based on cDNA sequences' = ((18:0.3996543,(51:0.37291068,((52:0.15963702,50:0.19284703):0.13523069,19:0.30876437):0.10743884):0.067774735):0.066816105,((39:0.018550316,38:0.014364712):0.13863277,(2:0.20471771,(((33:0.11871346,32:0.10091418):0.037656065,((11:0.105404206,(23:0.12510295,(24:0.11984233,(21:0.0015128448,(22:0.0015203309,20:0.0015533544):0.0014112492):0.0999917):0.032677356):0.030773003):0.05168646,((40:0.07292155,49:0.032957546):0.08271068,((55:0.07967445,((31:0.0071783788,29:0.015614896):0.028979998,(30:0.018730469,28:0.0039245067):0.018876135):0.059368245):0.0660484,(27:0.13713153,(26:0.057748944,(42:0.07262461,(41:0.050172593,57:0.06290322):0.07473674):0.02741048):0.088780686):0.020780152):0.033733048):0.07802501):0.037880484):0.032661345,(((16:0.09531772,(4:0.15126987,1:0.064742774):0.016494274):0.019837119,((46:0.17342356,45:0.06360429):0.0924037,15:0.107877925):0.053065788):0.026564859,(44:0.20250624,(((13:0.044194754,14:0.06951437):0.02895785,(9:0.05174088,10:0.080005206):0.031037817):0.0214173,(56:0.08279422,(25:0.16463518,(((6:0.008235034,(7:0.008143822,8:0.006038378):0.008104755):0.026608171,5:0.03661318):0.21059787,(((54:0.27767,((3:0.03969711,43:0.10130155):0.05094056,(47:0.016062532,36:0.09147724):0.09677826):0.023228187):0.029953986,((53:0.057589207,37:0.04156703):0.031255525,48:0.03107012):0.1001452):0.021607028,((34:0.13489203,35:0.09106398):0.06636936,(17:0.047020264,12:0.046151172):0.1400377):0.02545757):0.01891236):0.032897037):0.026115293):0.01398077):0.051201645):0.03960742):0.0540321):0.07070817):0.06794704):0.066816105); TREE 'GLO-like phylogenetic tree based on APGIII' = (((18,51),((50,52),19)),(2,((39,38),(((11,((((22,21),20),24),23)),(33,32)),((27,((55,((31,30),(29,28))),((49,40),(26,((42,41),57))))),((16,((4,1),((46,45),15))),(44,((56,(((34,35),54),(((6,7),8),5))),((13,14),(((9,10),25),((((3,43),((47,36),53)),(48,37)),(17,12)))))))))))); END; BEGIN LABELS; TAXAGROUPLABEL Gymnosperm COLOR = (RGB 1.0 0.70196078 0.70196078) ; TAXAGROUPLABEL Basal_Angiosperm COLOR = (RGB 1.0 0.8 0.66666667) ; TAXAGROUPLABEL Monocots COLOR = (RGB 0.86666667 1.0 0.66666667) ; TAXAGROUPLABEL Core_Eudicots COLOR = (RGB 0.73333333 0.78823529 1.0) ; TAXAGROUPLABEL Basal_Eudicots COLOR = (RGB 0.70196078 1.0 0.94117647) ; END; BEGIN SETS; TAXPARTITION * UNTITLED = Basal_Eudicots : 1 4 15 - 16 45 - 46, Basal_Angiosperm : 2 11 20 - 24 32 - 33 38 - 39, Core_Eudicots : 3 5 - 10 12 - 14 17 25 34 - 37 43 - 44 47 - 48 53 - 54 56, Gymnosperm : 18 - 19 50 - 52, Monocots : 26 - 31 40 - 42 49 55 57; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED (CHARACTERS = interactions) = unord: 1 - 7; TYPESET * UNTITLED (CHARACTERS = cDNA_sequences) = unord: 1 - 888; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED (CHARACTERS = interactions) = 'Mk1 (est.)': 1 - 7; ProbModelSet * UNTITLED (CHARACTERS = cDNA_sequences) = 'Jukes-Cantor': 1 - 888; END; BEGIN NOTES; TEXT TAXA = Taxa TAXON = 27 TEXT = 'Lacandonia schismatica PI MADS-box transcription factor mRNA, complete cds '; END; BEGIN CODONS; CODESET * UNTITLED (CHARACTERS = cDNA_sequences) = universal: 1 - 888; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1396264837375; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 310736547128265169; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 7011990676930870630; tell It; setDefaultOrder 0 7 8 1 9 10 6; attachments ; endTell; mqVersion 275; checksumv 0 3 1645812231 null getNumChars 7 numChars 7 getNumTaxa 57 numTaxa 57 short true bits 3 states 3 sumSquaresStatesOnly 739.0 sumSquares 739.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 2; mqVersion; setID 1 7640866781196903823; mqVersion 275; checksumv 1 3 3600876795 null getNumChars 888 numChars 888 getNumTaxa 57 numTaxa 57 short true bits 15 states 15 sumSquaresStatesOnly 666407.0 sumSquares 666407.0 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 2; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 39; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1680 938; setLocation -4 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #310736547128265169 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #310736547128265169; getWindow; tell It; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1641 871; setLocation -4 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #7011990676930870630 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 225; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1641 871; setLocation -4 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.NoColor.NoColor; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 246; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; showDataWindow #7640866781196903823 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 149; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1641 871; setLocation -4 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; getWindow; tell It; forceAutosize; endTell; hideWindow; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;