#NEXUS BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=23; TAXLABELS Muscodor_roseus_AY034665 Muscodor_cinnamomi_CMUcib_461_GQ848369 Muscodor_albus_CZ620_AF324336 Muscodor_crispans_B23_EU195297 Muscodor_oryzae_CMU_WR2_JX089321 Muscodor_suthepensis_JN558830 Muscodor_albus_strain_CMU44_HM473081 Muscodor_musae_CMU_MU3_JX089323 Muscodor_albus_isolate_9_6_HM034857 Muscodor_albus_AY927993 Muscodor_sp_AB_2011_JN426991 Muscodor_ghoomensis_6CCSTITD Muscodor_indica_6bCCSTITD Muscodor_fengyangensis_ZJLQ151_HM034852 Muscodor_fengyangensis_ZJLQ070_HM034853 Muscodor_sutura_SR2011_JF938595 Muscodor_yucatanensis_FJ917287 Muscodor_vitigenus_AY100022 Muscodor_equiseti_CMU_M2_JX089322 Xylaria_curta_DQ322144 Xylaria_arbuscula_AF163028 Xylaria_arbuscula_AF163029 Arthrinium_phaeospermum_Strain_OUCMBI101209_HQ914942 ; END; BEGIN CHARACTERS; TITLE Nehau_final_alignment; DIMENSIONS NCHAR=699; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Muscodor_roseus_AY034665 ---TGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGA-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTT-ACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCCGGAGGA--- Muscodor_cinnamomi_CMUcib_461_GQ848369 -----------AAAATCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCCTGCCCGTAAAACCCCCCTA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAAA-------------- Muscodor_albus_CZ620_AF324336 ---TGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACAGAGTTTTCCAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCCGGGAGGA-- Muscodor_crispans_B23_EU195297 --------------------------------------------------------------------------CCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGA---------------------------------------------------------- Muscodor_oryzae_CMU_WR2_JX089321 TTTTGGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGAAACCCCCGGAAAATT--------------------------- Muscodor_suthepensis_JN558830 ------------------------------------------------------ATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACCTAGTGGTTACCCTGTAGTCCCGGG-------TGCTGATTCTT--------------CCTCAACGTC-TTATCGTC-AAAGGTCAGTTAA--CCTGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCG----------------------------------------------------- Muscodor_albus_strain_CMU44_HM473081 ---------------------------------------------------------------------------------------------------GTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAAA-------------- Muscodor_musae_CMU_MU3_JX089323 ----------------------------------------GACAGCGGA?GGA?ATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA--- Muscodor_albus_isolate_9_6_HM034857 ----------------------------------------------------------CAGAGTTTTCCAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGG-------------------------------------------------------------- Muscodor_albus_AY927993 ------------------ACTAGTGATTTCCGTAGGTGAACCTGCGGAGGGATCATTACAGAGTTTTCCAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAAATC Muscodor_sp_AB_2011_JN426991 ---------------------------TTCCGTAGGTGAACCTGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCGGCGGAGGCTACCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTG--CCGTAAAACCCCC-TA--TATCAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA--- Muscodor_ghoomensis_6CCSTITD -------------------------------------------------------------------------------------------------------------TTCGGGAGGCTTCCCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCAGG-------TGCTAGATCGT--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGCCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAA-GTGATTGCGCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTTCCGGCCCCTA--AA--------------------------------------------------------------------------------------- Muscodor_indica_6bCCSTITD --------------------------------------------------------------------------------------------------------------------------CCTATAGGGGATACCACATAGTGGTTACCCTGTAGTCCCACG-------TCCTAGATCCG--------------GCTCAACGTC-TTATCGTC-TACGACTAGCTA---CCCGGTGGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTT---TATGGCATTCTGAAT-TATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCACTGCCCGTAGCTCCCTAAAAGTGGATTGGCGGAGTTGGTTCTCA-CTCTAGGCGTAGTAAAT--CTATCTCGCCTCTGTAGTGGTC----------------------------------------------------------------------------------------------------- Muscodor_fengyangensis_ZJLQ151_HM034852 ----------------------------------------------------------CAGAGTTTTCAAAACTCCCAACCCTTTGTGAACCTACCATCGTTGCTTCGGCGGCGGAGGTGCTACGCTGCAAGGCGCTACCCTGTAGTTACCCTGTAGTCCCAGGGAGCTGTCATCAGCTCTTTAGGGGAGCCCACAGCCTGGCGACGTTTTCGTTACAGGGCTGTAGCT--CCGGACTGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTTC--TTTGGAACTCTGAAT-CATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGGGCCTACGGCACAGCCTGTAGCCCCTTAAA-GTGATTG-GCGGAGTTGGTTCTAT-CTCTAAGCGTAGTAATT--TCTTCTCGCTTCTGCAGTAGTGCTGGCCCCCG--CCGTAAAACCCTCCTA--TACAATGG--------------------------------------------------------------- Muscodor_fengyangensis_ZJLQ070_HM034853 ----------------------------------------------------------CAGAGTTTTATAAACTCCCAACCCTTTGTGAACCTACCATCGTTGCTTCGGCGGCGGAGGTGCTACGCTGCAAGGCGCTACCCTGTAGTTACCCTGTAGTCCCAGGGAGCTGTCATCAGCTCTTTAGGGGAGCCCACAGCCTAGCGACGTTTTCGTTACAGGGCTGTAGCT--CCGGACTGCCCTCCCCGCCGGCGGCCAACT-AAACTCTGTTTTC--TTTGGAACTCTGAAT-CATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGGGCCTACGGCACAGCCTGTAGCCCCTTAAA-GTGATTG-GCGGAGTTGGTTCTAT-CTCTAAGCGTAGTAATT--TCTTCTCGCTTCTGCAGTAGTGCTGGCCCCCG--CCGTAAAACCCTCCTA--TACAATGG--------------------------------------------------------------- Muscodor_sutura_SR2011_JF938595 -----------------------------------------------------------------------------------------------------------------AGAGTTTTCTAA-CTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCG-GCGGAGGCTACCCTGCGGGAGAATACCACTTAGTGGTTACCCTGTAGTTTCAGGTACATCAGCTACCCGGTAGTCATCCCCGCCGGCGGCCAACT-AAACTCTGTTTTC--TTTGGAATTCTGAAT-AACAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-TTGTTGCTTAGCGTTGGGAGCCTACGGCACGGCCCGTAGCTCCTTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAAGCGTAGTAATT--ATATCTCGCTTCTGTAGTGGTCCCGGCCCCTG--CCGTAAAACCCCT-TA--TACAAAGG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAA------------------------ Muscodor_yucatanensis_FJ917287 ---------------------------------------------------------------GTAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCG-GCGGAGGCTACCCTGCGGGGGATTACCACCTAGTGGTTACCCTGCAGTCTCAGGTACATCTGTTACCCGGTAGTCATCCCCGCCGGCGGCCAACT-AAACTCTGTTTTC--TTTGGAATTCTGAAT-CATAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-CTGTTGCTTAGCGTTGGGAGCCTACGGCATAGCCCGTAGCTCCTTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAAGCGTAGTAACT--ATATCTCGCTTCTGTAGTAGTTCCGGCCCCTG--CCGTAAAACCCCT-TA--TACAAAGG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCG--------- Muscodor_vitigenus_AY100022 -----------------------------------------------------------------------------------CCGTAGGTGAACCTGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCG-GCGGAGGCTACCCTGCGGGAGAATACCACTTAGTGGTTACCCTGTAGTTTCAGGTACATCAGCTACCCGGTAGTCATCCCCGCCGGCGGCCAACT-AAACTCTGTTTTC--TTTGGAATTCTGAAT-AACAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-TTGTTGCTTAGCGTTGGGAGCCTACGGCACGGCCCGTAGCTCCTTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAAGCGTAGTAATT--ATATCTCGCTTCTGTAGTGGTCCCGGCCCCTG--CCGTAAAACCCCT-TA--TACAAAGG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA---- Muscodor_equiseti_CMU_M2_JX089322 ----------------------------------------------------------GAAGTAAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATCATTACAGAGTTTTCTAAACTCCCAACCCTATGTGAACTTACCTTTGTTGCTTCGGCG-GCGGAGGCTACCCTGCGGGAGAATACCACTTAGTGGTTACCCTGTAGTTTCAGGTACATCAGCTACCCGGTAGTCATCCCCGCCGGCGGCCAACT-AAACTCTGTTTTC--TTTGGAATTCTGAAT-AACAAACTTAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGCATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCACCACTTAAGCC-TTGTTGCTTAGCGTTGGGAGCCTACGGCACGGCCCGTAGCTCCTTAAA-GTGATTG-GCGGAGTTGGTTCTCA-CTCTAAGCGTAGTAATT--ATATCTCGCTTCTGTAGTGGTCCCGGCCCCTG--CCGTAAAACCCCT-TA--TACAAAGG-TTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAG----------- Xylaria_curta_DQ322144 ---------------------------------------------------------------------------------------------------AAGAGTTCTATGACTCCCAAACCCATGTGAACATACCGTACGTTGCCTCGGCAGGTCGCGTCTACC---CTGTAGCACCCTACCCTGTAAGACCCTACCCTGTAGGACTTACCCGGTAGGACC-TACCCGGCAGACG?GGGTAAGCCTGCCGGCGGCCCACGCAAACTCTGTTTTGGCAATGTAATTCTGAATACTATAACTAAATCAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCTCTGTTGCTTAGTGTTGGGAGCCTACGGC----ACCGTAGCTCCTCAAA-GTCAGTG-GCGGAGTCGGCTC?CAGCTCTAGACGTAGTAATTC-TTTTCTCGCCTGTGTGTTGTGCCGGTCCCCTGCCGTAGAAACCCCCCCTAATTTTTTAAA--------------------------------------------------------------- Xylaria_arbuscula_AF163028 ------------------------------------------------------------------------------------------------------------CCAGCGGAGGGATCATTAAAGAGTTAATTACAACTCCCAAACCCATGTGAACTTACC---TTCTGTTGCCTCGGCAGGTCGTGTTTACCCTGTGAGGTCCTACCCTGTAGGACCCTACCTGGTAGACACGGGTACGCCTGCCGGTGGCCCATG-AAACTCTGTTAATTCTATGTTAT-CTGAAT-CTATAACTAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTAC-GCCT--TCTGTAGCTCCCCAAA-GTTAGTG-GCGGAGTCGGT-CACA-CTCTAGACGTAGTAGAT--CTATCTCGTCTGTA-GTGAGGCCGGTCCCCTGCCGTAAAA--CCCCCCTAATTTTTAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA---- Xylaria_arbuscula_AF163029 ---------------------------------------------------------------------------------------------------------------GCGGAGGGATCATTAAAGAGTTAATTACAACTCCCAAACCCATGTGAACTTACC---TTCTGTTGC-TCGGCAGGTCGTGTTTACCCTGTGAGGTCCTACCCTGTAGGACCCTACCTGGTAGACACGGGTACGCCTGCCGGTGGCCCATG-AAACTCTGTTAATCTATGTTATT-CTGAAT-CTATAACTAAATAAGTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATTAGTATTCTAGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCCCCTGTTGCTTAGCGTTGGGAGCCTACAGCCT--TCTGTAGCTCCCCAAA-GTTAGTG-GCGGAGTCGGTTCACA-CTCTAGACGTAGTAGATT-CTATCTCGTCTGTA-GTGAGGCCGGTCCCCTGCCGTAAAA--CCCCCCTAATTTTTAAAGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGA---- Arthrinium_phaeospermum_Strain_OUCMBI101209_HQ914942 -----------------------------------------------------------------------------------CCCTAACGGAAGTCTTAAGAGTTATACAACTCCCATACCATTTGTAAACTTTACTCAGTTATGCCTCGGCGTGAACTGCGTACGGAGGCAGAGTGGTGTTACCCGGTAGCTTACCCTGTAGGTTACCCTGTAGCGCTACCCTGTAT-CAACTCCCGCGCAGCCCGCCGGTGGTACACTAAACTCTTGTTTTA--TTTTATATTCTGAGCGTATTATTTTAATAA-TTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCATCAGTATTCTGGTGGGCATGCCTGTTCGAGCGTCATTTCAACCCTTAAGCC----TAGCTTAGTGTTGGGAATCTACTGT----ATTGTAGTTCCTTAAA-GACAGTG-GCGGAGCGATAGTTGTCCTCTGAGCGTAGTAAATTTATTTCTCGCTTCTGTAAGGCTCTATTCTCCCG--CCATAAAACCCCC-AATTTTTTAGTGGTTGACCTCGGATCAGGTAGGAATACCCGCTGAACTTAAGCATATCAAAA------------- ; END; BEGIN TREES; Title final; LINK Taxa = Taxa; TRANSLATE 1 Muscodor_roseus_AY034665, 2 Muscodor_cinnamomi_CMUcib_461_GQ848369, 3 Muscodor_albus_CZ620_AF324336, 4 Muscodor_crispans_B23_EU195297, 5 Muscodor_oryzae_CMU_WR2_JX089321, 6 Muscodor_suthepensis_JN558830, 7 Muscodor_albus_strain_CMU44_HM473081, 8 Muscodor_musae_CMU_MU3_JX089323, 9 Muscodor_albus_isolate_9_6_HM034857, 10 Muscodor_albus_AY927993, 11 Muscodor_sp_AB_2011_JN426991, 12 Muscodor_ghoomensis_6CCSTITD, 13 Muscodor_indica_6bCCSTITD, 14 Muscodor_fengyangensis_ZJLQ151_HM034852, 15 Muscodor_fengyangensis_ZJLQ070_HM034853, 16 Muscodor_sutura_SR2011_JF938595, 17 Muscodor_yucatanensis_FJ917287, 18 Muscodor_vitigenus_AY100022, 19 Muscodor_equiseti_CMU_M2_JX089322, 20 Xylaria_curta_DQ322144, 21 Xylaria_arbuscula_AF163028, 22 Xylaria_arbuscula_AF163029, 23 Arthrinium_phaeospermum_Strain_OUCMBI101209_HQ914942; TREE tree1 = (23:50.541666665,((20:55.6328125,(21:2.80952381,22:5.19047619)1.0:42.3671875)0.862:12.91666667,((16:-8.32638889,(17:9.51315789,(18:-4.625,19:6.625)0.904:6.48684211)0.914:7.32638889)1.0:53.00669643,((14:1.71691176,15:1.28308824)1.0:47.40745192,(13:-3.74088542,(12:3.303125,(((7:-2.89887153,8:3.89887153)0.372:1.53157552,(9:-2.671875,(10:1.91477273,11:-0.91477273)0.939:2.671875)0.551:0.84342448)0.267:1.04980469,(6:12.06494141,((4:-3.11886161,5:3.11886161)0.411:1.64990234,(3:2.140625,(1:2.25,2:2.75)0.438:0.359375)0.429:0.47509766)0.188:0.24755859)0.169:0.85595703)0.981:3.11621094)0.999:6.165625)0.989:13.85026042)0.969:10.06129808)1.0:23.99330357):50.541666665); END;