#NEXUS [written Sat Apr 25 20:51:28 EDT 2015 by Mesquite version 2.75 (build 566) at Macintosh-99.local/10.0.1.3] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=82; TAXLABELS Adiantum_aleuticum_WCLG Adiantum_raddianum_BMJR Alsophila_spinulosa_GANB Amborella_trichopoda_scaffold00019.47 Anemia_tomentosa_CQPW Angiopteris_evecta_NHCM Aquilegia_coerula_Aquca_00330.1 Arabidopsis_thaliana_AT5G10780_similar Argyrochosma_nivea_XDDT Asplenium_nidus_PSKY Asplenium_platyneuron_KJZG Athyrium_filixfemina_URCP Athyrium_sp_AFPO Azolla_caroliniana_cf_CVEG Blechnum_spicant_VITX Bolbitis_repanda_JBLI Botrypus_virginianus_BEGM Cedrus_libani_GGEA Crepidomanes_venosum_TWFZ Cryptogramma_acrostichoides_WQML Cryptomeria_japonica_DSXO Culcita_macrocarpa_PNZO Cystopteris_fragilis_LHLE Cystopteris_protrusa_YOWV Cystopteris_reevesiana_RICC Cystopteris_sp_XXHP Cystopteris_utahensis_HNDZ Davallia_fejeensis_OQWW Dennstaedtia_davallioides_MTGC Deparia_lobatocrenata_FCHS Didymochlaena_truncatula_RFRB Diplazium_wichurae_UFJN Dipteris_conjugata_MEKP Encephalartos_barteri_GNQG Ephedra_sinica_VDAO Equisetum_diffusum_CAPN Equisetum_hyemale_JVSZ Gaga_arizonica_DCDT Ginkgo_biloba_SGTW Gymnocarpium_dryopteris_HEGQ Homalosorus_pycnocarpos_OCZL Hymenophyllum_bivalve_QIAD Hymenophyllum_cupressiforme_TRPJ Illicium_parviflorum_ROAP Leucostegia_immersa_WGTU Lindsaea_linearis_NOKI Lindsaea_microphylla_YIXP Lygodium_japonicum_PBUU Myriopteris_rufa_GSXD Nephrolepis_exaltata_NWWI Notholaena_montieliae_YCKE Nuphar_advena_WTKZ Onoclea_sensibilis_HTFH Ophioglossum_petiolatum_WTJG Ophioglossum_sp_QHVS Osmunda_javanica_VIBO Osmunda_sp_UOMY Parahemionitis_cordata_ZXJO Peperomia_fraseri_XSZI Phlebodium_pseudoaureum_ZQYU Phymatosorus_grossus_ORJE Pilularia_globulifera_KIIX Pityrogramma_trifoliata_UJTT Plagiogyria_japonica_UWOD Pleopeltis_polypodioides_UJWU Polypodium_amorphum_YLJA Polypodium_glycyrrhiza_CJNT Polypodium_hesperium_B_IXLH Polypodium_hesperium_GYFU Polystichum_acrostichoides_FQGQ Psilotum_nudum_QVMR Pteridium_aquilinum_Contig3731 Pteris_ensiformis_FLTD Pteris_vittata_POPJ Sceptridium_dissectum_EEAQ Sticherus_lobatus_XDVM Thelypteris_acuminata_MROH Thyrsopteris_elegans_EWXK Tmesipteris_parva_ALVQ Vittaria_lineata_SKYV Woodsia_ilvensis_YQEC Woodsia_scopulina_YJJY ; END; BEGIN CHARACTERS; TITLE DUF1077; DIMENSIONS NCHAR=609; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Adiantum_aleuticum_WCLG ATGGAGAAGGGC---------AAGGGAGCCGCT------CGTAAGTGGGCTGTCGATTTC---TCTGAGGCTGCTTCCACC---------------------------------CGCGATGTGCCCGACCCACCCGGATTCTCTCGATCTTCCTTGGATCTGGATGAG---GTTGGGGCTGGTCGTCAAAAGAAGGAGACTGATATCTCATGGAAGCAGCAAAAAGCATGGGAGGTAGCACAAGCTCCTTTCAAGAACCTGCTTATGATGGGG------------------------------GTCATGATGTGGATGGCTAGCAGCACCGTTCATTTGTTCAGCATTGGAATCACAATCTCAGCATTGTGGCAACCTATCAGTGCACTTCAAAGCGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACACTGCTTCCAAAAATTGTCTTTATATGTTTGAATGTTGCTGGGTTACTTCTAGGGCTGCGGAAGCTTTACACACTAGGCCTTCTCCCGACACATGCATCGGATTGGGTGTCCTCTCTACCACCGCCACCTATGGCAGAATTCTCAGGAGGGGGTGCTCCATTCAAGTGA Adiantum_raddianum_BMJR ATGGAGAAGGGT---------AAGGGAGGCACT------CGCAAGTGGGCTATCGATTTC---TCTGAGGCTGCCTCCTCC---------------------------------CGCGATGTGCTGGACCCTCCAGGTTTCTCTCGATCGTCACTGGATCTGGATGAG---GCTGGGACTGGACGT---AAGAAAGAGATTGATACCGCATGGAAGCAGAGCAAAGCATGGGAGGTAGCACAAGCTCCATTCAAGAACCTGCTGATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACCGTCCATTTGTTTAGCATTGGAATCACAATCTCAGCATTGTGGCAACCTATTAGTGCCCTTCAAAGTGTTGGCAAAGTGTTTGAGCCTTTCCAGGATGCTCGGACAGACTTGCTACTTCCCAAGATACTCTTTATATGTTTGAATATTGCTGGCTTACTTCTAGGGCTTTGGAAGCTTAACACGCTAGGCCTCCTACCGACAAATGTATCGGATTGGGTGTCGTCTCTACCACCGCCCCCTATGGCCGAATTCTCAGGAGGGGGCGTTCCATTTAAGTGA Alsophila_spinulosa_GANB ATGGACAAGGGA---GCACCAAAAGGAACAAGC------CGCAAGTGGGCCATCGATCTC---TCAGAGACCTCCTCTTCATCTTCT---------------------------CGAGATGTGCCCGATCCTCCCGGCTTCTCTCGATCTTCTTTGGATCTGGATGAG---GCTGTAGCTGGTCGCCAAAAGAAGGAGACAGATACATCATGGAAGCAACAAAAAGCATGGGAGATTGCACAAGCGCCTTTCAAAAACTTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCCGGCAGCACTGTTCACTTGTTTAGCATTGGTATCACAATCTCAGCCTTGTGGCAACCCATAAGTGCGCTCCAAAGTGTTGGCAAAATGTTTGAGCCGTTTCAAGATGCTCGGACAGACACTTTACTTCCCAAGCTTGTTTACATAAGTCTGAACGTCGCAGGTTTACTTCTAGGTCTTTGGAAGCTTAACTCGCTTGGCCTTCTTCCAACACATGCATCTGATTGGGTGTCTTCTCTTCCACCACCACCGATGGTTGAGTTCTCAGCAGGGGGGTTTCCATTCAAGTAA Amborella_trichopoda_scaffold00019.47 ATGGAGAAGGGA---------AAAGGGCTCCCT------CGTCGATGGGCCATCGATCTC---GTAGATACCTCATCACAGTCCTCA---------------------------CGAGACGTTCCAGATCCCCTTGGATTCAGTCGAGCTTCTCTTGAATCGGATGAA---GCATCTGGAAGTCGTCAGAAGAAGGAAGCTGAAGCAGCATGGAAGTTACAGAAAGCATGGGAAGTGGCCCAAGCTCCATTTAAGAATTTGTTCATGATGGCT------------------------------TTCATGATGTGGATGGCCGGTAGCACAGTGCACTTGTTCAGTATTGGCATCACATTCTCTGCTCTTTGGCAGCCCATAAGTGCCCTTCAGGGTGTGGGAAAGGTGTTTGAGCCATACAAGGACTCTAGAATTGACATTCTTGCTCCTAAGTTGCTATTCATAGCTCTGAATCTCGCTGGGCTGGCCCTTGGGGTCTGGAAGTTGAACACGTTGGGCCTACTTCCGACGCATGCTTCTGACTGGGTCTCTACGCTACCTCCAGCTCAGGAGGTTGAATTTTCGGGTGGTGGTCGTCCTTTT---TAA Anemia_tomentosa_CQPW ATGGAGAGGATG---GCA---AAAGGATCTAAT------CGGAAGTGGGCAATTGACCTG---TCGGATGCCTCATCTTCAATTTCC---------------------------CGCGATGTGCCGGATCCTCCTGGCTTCAATCGAACTTCTCTTGATTTGGATGAA---GTGGGAGCTGGTCGTCAGAAAAAGGAGATAGACACATCGTGGAAGCAGCAAAAAGCATGGGAGGTTGCTCAAGCGCCGTTCAAAAACCTCTTCATGATGGGC------------------------------TTCATGATGTGGATGGCGGGTAACACCGTGCACTTGTTCAGCATTGGGATCACTATCTCAGCCCTCTGGCAACCTATAAGTGCCCTCCAGGGTGTTAGTAAAGTATTTGAGCCTTTTCAGGATGCTAGGACGGATACCCTCCTTCCAAAAGTGGTTTTTATTCTTTTGAATGTTGCTGGCCTACTTCTGGGTCTTTGGAAGTTGAACACGCTTGGCCTTCTGCCTACACATGCATCAGATTGGGTGTCTTCACTTCCTCCTCCACCAATGGTGGAGTTTTCGGGAGGTGGAGTGCCTTTCGCTTAT Angiopteris_evecta_NHCM ATGGAGAAGGGA---TCGAACAAAACGACCTCCTCCGCTCGTAAATGGGCCATCGACCTC---TCCGACCCTTCCCTCTCTTCATCC---------------------------CGTGACCTTCCCGATCCTCCTGGCTTCTCACGCTCCGCCTTGGACCAGGATGAC---AGTGCAGTTAGCAGGCAAAAGAAGGAATCGGATGCTGCTTGGAAAAATCAGAAAGCATGGGAAGTTGCACAAGCACCTTTCAGAAATCTTTTCATGATGGGG------------------------------TTTATGATGTGGATGGCTGGAAGCACTGTACATTTGTTCAGTATTGGTATCACATTTTCGGCACTGTGGCAACCGATAAGTGCTCTTCAGGGCGTCAGCAAAGTGTTTGAGCCCTACCAGGATACACGCACAGATATCTTACTGCCAAAGCTTATTTATATAGCATTGAATGTGGCAGGCCTGCTACTGGGTCTCTGGAAGCTGAACTCACTTGGCCTACTTCCGACACATGCATCAGATTGGGTGTCCTCTCTTCCACCGCCTCAGATGGTTGAGTTTGCAGGAGGCGGGCTTCCTTTC---TAA Aquilegia_coerula_Aquca_00330.1 ---------------------------ATGGTT------AGAAAATGGGCAGTAGATTTA---ACTGAATCATCTTCTCTTTCAATC---------------------------AAAGATATACCAGATCCTCTTGGTTACACTCGAGCTACTCAAGATCAGGATGAT---TCTACTGTTAGTCGTCAGAAGAAGGATGCTGAAGCCAATTGGAAAGCTCAGAAAGCCTGGGAAGTGGCTCAAGCCCCTTTTAAGAATTTAATGATGATGGGC------------------------------TTCATGATGTGGATGGCTGGTAGTACAGTCCATCTGTTCAGTATTGGTATCACATTTTCAGCTCTTTGGCAGCCCATAAGTGCCCTACAAGGGATTGGAAAGGTTTTTGAACCATACAAGGACTCAAAAGTAGATATTCTGACACCTAAATTACTCTTTGCTGCCCTTAACTTGGCGGCTCTGGCGTTGGGTGTTTGGAAGCTCAACACGTTGGGTCTTCTTCCGACACATGCATCAGACTGGGTATCCTCCTTACCTCCTGCCCAGGAGGTTGAATATTCTGGTGGGGGTCTTCCGCTATTTTGA Arabidopsis_thaliana_AT5G10780_similar ATGGACAAAGGCAAAGCAGTGATGGGTACTGGT------CGGAGATGGGCCGTCGAATTC---TCCGATCAATCTACTGTTCCATCTTCC------------------------CGTGACATCCTCGATCCACCTGGCTTCTCTCGTGCCTCTCAGGAACAGGATGAT---TCAGCAAACAGCCGCCAAAAGAAAGACGCTGAAGCTACTTGGAAACTTCAGAAAGCGTGGGAAGTAGCGCAATCTCCATTTAAGAATTTGATGATGATGGGT------------------------------TTCATGATGTGGATGGCTGGAAACACAGTTCATCTTTTTAGTATTGGTATTACTTTCTCTGCTCTTTGGCAGCCTATCAGTGCTCTTCAGAGTGTTGGAAAGATTTTTGAGCCATTCAAGGATAACAAAGTGGAACTACTTATGCCGAAATTAGTGTTCCTTGCCCTAAACCTTGGAGGGCTAGCTTTGGGTGTCTGGAAGCTTAACACTTTGGGGCTTCTTCCAACACATGCATCAGATTGGGTTTCATCTCTACCCCCTCCTCAG--------------------------------------- Argyrochosma_nivea_XDDT ATGGAGAAGGGC---------AAGGGAGGCGCT------CGCAAGTGGGCTATCGATTTT---TCTGAGGCTGCTTCCTCC---------------------------------CGCGATGTGCCCGACCCACCCGGATTCTCTCGATCTTCCTTGGATCTGGATGAG---GCTGCGGCTGGTCGTCAAAAGAAGGAGACCGATACCTCATGGAAGCAGCAGAAAGCATGGGAGATAGCGCAAGCTCCTGCCAAAAACCTGCTCATGATGGGC------------------------------TTCATGATGTGGATGGCCGGCAGCACCGTTCATCTATTCAGCATTGGAATCACAGTCTCAGCATTGTGGCAGCCTATCAGCGCACTTCAAAGCGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCGCGAACGGACACCCTGCTTCCTAAGCTTGTGTTTATATGCTTGAATGCTGCTGGCTTACTTCTAGGGCTGTGGAAGCTTAATACACTAGGCCTTCTTCCTACACATGCATCTGATTGGGTGTCGTCTCTTCCACCACCACCAATGGCTGAGTTCTCTGGAGGAGGGATTCCATTCAACTGA Asplenium_nidus_PSKY ATG------------GCAGGAAAGGGAGCCACC------CGCAAGTGGGCAATTGACTTC---TCTGAGAGTTCTTCTTCTTTCTCCTCCTCCTCCTCCTCCTCTTCCCTGTCCCGAGACGTGCCTGACCCTCCCGGCTTCTACCGAACTTCTACGGATCTGGATGAG---ACTGCAGCTGGTCGG---------GAGACAGATATATCGTGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCTATCAGTGCACTTCAAAGTGTGGGAAAAGTGTTTGAACCTTTCCAGGATGCTCGAACAGACACACTACTTCCGAAGGTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTTGGGCTTTGGAAGCTCAACACCCTCGGTCTCTTGCCAACTCATGCATCGGATTGGGTTTCCTCACTTCCACCGCCGGCAATGGTTGAATTCTCGGGGGGCGGGGTTCCATTCAAGTGA Asplenium_platyneuron_KJZG ATG------------GCAGCAAAGGGAGCCACC------CGCAAGTGGGCGATTGACTTC---TCTGAGAGTTCCTCCTCCTCCTCCTCCTCCTCCTTCCTGTCC---------CGAGAGGTGCCTGACCCTCCCGGATTTTCGAGAACGTCTGCGGATCTGGATGAG---GCTGCAGCAGGTCGGCAAAAGAAGGAGACAGATATATCGTGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATTACAATCTCAGCTTTGTGGCAACCCATCAGTGCTCTCCAAAGTGTGGGAAAAGTGTTTGAACCTTTCCAGGATGCTCGAACGGACACGCTACTTCCTAAGGTTGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTCGGTCTCCTGCCCACTCATGCATCTGATTGGGTTTCCTCACTTCCACCACCGGCAATGGTTGAATTCTCGGGGGGGGGCATTCCATTCAAGTGA Athyrium_filixfemina_URCP ATGGAGAAGGGC---GCAGGAAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCTTCTTCCTCCTCCTCCTCCTCTTCT---------------CGAGACGTGCCTGACCCTCCCGGCTTCTCCCGATCTTCTTCGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCACCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTCTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCGTATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCCGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGGTTTCCATTCAAGTGA Athyrium_sp_AFPO ATGGAGAAGGGC---GCAGGAAAAGGGGCGACC------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCTTCTTCCTCCTCCTCCTCCTCTTCT---------------CGAGACGTGCCTGAACCTCCCGGCTTCTCCCGATCTTCTTCGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCACCTTTCAAAAACCTGTTTATGATGGGA------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTCCAAAGCCTCGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACACTTGGTCTTCTTCCTACACATGCATCCGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGGTTTCCATTCAAGTGA Azolla_caroliniana_cf_CVEG ---------------------------------------------------------------------------------------------------------------------GACGTTGCTGATCCTCCTGGATTCTCCAAAGCTTCCCTGGATGCGGAAGAA---TCTTCAGGTGGTCGTCAGAGGAAGGAGGTGGATATGTCATGGAAGCAACAAAAAGCATGGGAAGTTGCACAAGCACCATTTAAAAATTTGTTTATGATGGGT------------------------------TTTATGATGTGGATGGCTGGAAGCACTGTGCATTTATTTAGCATTGGGATCACAGTCTCAGCGCTCTGGCAACCTATAAGTGCCTTAAAAAGTGTCGGCAAAGTTTTTGAGCCATTTCAGGATTCCCATACAAACACGTTAGCACCCAAACTTATATTCATATGCTTGAATGTGGCTGGTATGCTTTTGGGTCTTTGGAAGCTTAATAGTCTCGGTCTCCTTCCAACGCATGCTTCTGATTGGGTTTCTTCTTTACCTCCACCACCTATGGTTGAGTTTTCTGGAGGTGGAATTTCGTTTATTTGA Blechnum_spicant_VITX ATGGAGAAGGGT---GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCTTCCTCCTCCTCTTCCTCTTCT------------------CGAGACGTGCCTGATCCTCCCGGCTTCTCCCGATCTTCTTCAGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCACCTTTCAAAAACCTGTTCATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACCGTTCACTTGTTCAGCATTGGGATCACAATCTCCGCTTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACTGACACCCTACTTCCTAAGATCGTTTTCATATGTCTGAATGATGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGCCTTCTTCCTACACATGCATCCGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGATGGAATTTTCAGGAGGGGGGTTTCCATTCAAGTGA Bolbitis_repanda_JBLI ATGGAGAAGGGT---GCAGTGAAAGGGGCGACT------CGCAAGTGGGCAATCGACTTC---TCTGAGGCTTCTTCCTCCTCTTCT---------------------------CGAGATGTCCCTGATCCTCCTGGCTTCTCCCGCTCTTCTCTGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGACAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGTACCGTGCATTTGTTCAGCATTGGGATCACAATATCAGCCTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCTTGCTTCCCAAGCTTGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTTAACTCCCTTGGTCTTCTTCCTACACATGCATCGGATTGGGTGTCCTCACTTCCACCACCAGCAATGGTTGAATTTTCAGGAGGGGGGCTTCCATTCAAGTGA Botrypus_virginianus_BEGM ATGGAGAAGGCA---TCAACCAAAGGC------------CGCAAATGGGCTGTCGAGCTA---TCCGACTCTTCCTCTTCGTCTTCT---------------------------CGAGATGTCCTTGACCCCCCTGGCTTTACGCGATCTGCATCCGACCTGGATGAG---GTTGCAACTGGTCGACAAAAGAAGGAAATGGATTCAACTTGGAAACAACAGAAAGCATGGGAAGTAGCACAAGCACCATTCAAAAATCTATTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGAAATACTGTACACTTGTTCAGTATTGGGATTACATTCTCAGCACTTTGGCAACCTATAAGTGCCCTTCAGGGTGTCAGCAAAGTATTTGAACCATATCAGGATGCACGAACAGACATCATACTCTCAAAACTTGTTTATATACTCCTTAATGTGGCAGGCCTCTTGTTGGGTCTTTGGAAGCTCAACTCACTTGGACTTCTGCCAACACATGCATCAGATTGGGTTTCGTCTCTTCCTCCACCTCCAATGGTTGAATATTCAGGAGGGGGCAATCCGTTTGATTAA Cedrus_libani_GGEA ATGGATAAGAAA---------GGTCACTATGTT------CGCAAATGGGCGATAGATTTA---GCAGATTCGTACAATTCTTCA------------------------------AGGGATATCCCCGATCCCCCTGGTTACGACCGCTCGGCTCTTGAAGTGGATGAG---AGCTCTAGCAGTCGGCAAAAAAAGGAAGTTGATGTGACCTGGAAAGTACAGAAAGCTTGGGAAGTGGCTCAAGCCCCTTTTAAGAACTTACCTATGATGGGA------------------------------TTCATGATGTGGATGGCTGGGAGTACGGTGCACTTGTTTAGTATTGGGATCACTTTTTCTGCTCTTTGGCAGCCTATCACTGCTCTTCAGGGTGTAGGAAAAGTTTTTGAGCCTTTTCAGGATTCACGAATAGACCTCCTACTGCCTAAATTGGTTTACATTGCCTTGAACTTAGCAGGGCTGTTGCTAGGCGTCTGGAAGCTGAATACATTAGGACTCTTGCCAACTCATGCCTCTGACTGGGTGTCCTCTCTCGCTCCTCCTCCAGAAATCGAGTACTCTGGTGGTGGGATTCCATTTATGTAA Crepidomanes_venosum_TWFZ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGGAATCACGATTTCAGCTCTGTGGCAACCGATAAGTGCTCTCCAGGGTGTTGGCAAGGTTTTTGAGCCTTTTCAGGATGCCCGGACAGATGTTCTACTTCCCAAGCTTGTATACATAGCTTTAAATATTGCAGGTTTACTACTGGGTCTTTGGAAGCTGAACTCGCTTGGTCTTCTTCCAACACATGCATCAGACTGGGTGTCCTCTCTTCCTCCACCTCCAATGGTTGAATTTTCAGGAGGAGCAGTCCCATTTACTTAG Cryptogramma_acrostichoides_WQML ATGGAGAAGGGC---------AAGGGAGGCGCC------CGCAAGTGGGCTATCGACTTG---TCTGAGACTGTTTCCTCA---------------------------------CGCGACGTGCCTGACCCGCCCGGATTCTCTCGATCGTCATTGGATCTGGAGGAG---ACTGCTGCCGGTCGTCAAAAGAAGGAGACAGATACCTCATGGAAGCAGCAAAAAGCATGGGAGGTAGCACAAGCTCCTTTCAAGAACCTGCTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGTACTGTCCATTTGTTCAGCATTGGAATCACAATCTCAGCATTGTGGCAACCTATCAGCGCACTTCAAAGTGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGATACCCTGCTTCCTAAGCTTGTCTTCATATGTCTGAATGTTGCTGGCTTACTTCTGGGGCTGTGGAAGCTCAACACACTTGGCCTTCTTCCTACACATGCATCTGATTGGGTGTCTTCGCTCCCACCACCACCAATGGCTGAGTTCTCAGGAGGGGGAGTTCCATTCAAGTGA Cryptomeria_japonica_DSXO ATGGAGAAGAAA---------GGGGCCTATGTT------CGGAAATGGGCGATAGAGCTA---GCTGACGCTTCTAATTCATCA------------------------------AGGGAAATTCCCGATCCCCCCGGTTTTGATCGCTCCACTGCAGAGCAGGATGAG---AGTTCAATAAGCCGGCAAAAGAAGGAAGTTGAGTTGACATGGAAATCACAGAAAGCCTGGGAAGTGGCGCAAGCCCCTTTTAAGAACTTACTCATGATGGGA------------------------------TTCATGATGTGGATGGCTGGGAGTACAGTGCACTTGTTCAGTATTGGGATAACGTTCTCAGCTCTTTGGCAGCCTATTAGTGCTCTTCAGGGTGTTGGAAAAGTTTTTGAGCCCTTTCAAGATTCACGAATAGACTTACTACTACCGAAGCTTGTTTACATTGCCTTGAACTTAGCAGGAATGCTGTTAGGCATCTGGAAGCTGAACACATTAGGACTTTTGCCCACTCATGCCTCTGATTGGGTGTCCTCACTGGCTCCTGCTCTTGAGATTGATTACGCTGGTGGAGGAATTCCATTTGCATAA Culcita_macrocarpa_PNZO ---------------------------------------------------------------------------------TCTTCT---------------------------CGAGATGTGCCCGATCCTCCCGGCTTCTCTCGATCTTCTTTGGATCTGGATGAG---GCTGTAGCTGGTCGCCAAAAGAAGGAGACGGATACATCGTGGAAGCAACAAAAAGCGTGGGAGATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACCTGTTCAGCATCGGAATCACAATCTCAGCCCTGTGGCAACCCATAAGCGCGCTCCAGAGTGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGGACAAACACTTTACTTCCCAAGCTTGTTTACATATCCCTGAACATGGCAGGTTTACTTCTAGGTCTTTGGAAGCTTTACTCGCTTGGTCTTCTTCCAACTCATGCATCTGATTGGTTGTCTTCTCTTCCACCACCACCAATGGTTGAGTTCTCAGGAGGGGGGATTCCATTCAATTAA Cystopteris_fragilis_LHLE ATG------------GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCCTCCTCTTCTTCTTCT---------------------CGAGATGTGCCTGACCCTCCCGGATTCTCTCGATCTTCTTCGGATCAGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCGGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGCTGCTGGTCTACTTCTAGGTCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTTTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Cystopteris_protrusa_YOWV ATG------------GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCCTCCTCCTCTTCTTCT---------------------CGAGATGTGCCTGACCCTCCCGGATTCTCTCGATCTTCTTCGGATCAGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCGGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGTCTACTTCTAGGTCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Cystopteris_reevesiana_RICC ATG------------GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCCTCCTCTTCTTCTTCT---------------------CGAGATGTGCCTGACCCTCCCGGATTCTCTCGATCTTCTTCGGATCAGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCGGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGTCTACTTCTAGGTCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTAAACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Cystopteris_sp_XXHP ATG------------GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCCTCCTCCTCTTCTTCT---------------------CGAGATGTGCCTGACCCTCCCGGATTCTCTCGATCTTCTTCGGATCAGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCGGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGTCTACTTCTAGGTCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Cystopteris_utahensis_HNDZ ATG------------GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCATCTTCATCTTCTTCT---------------------CGAGACGTGCCTGACCCTCCCGGATTCTCTCGATCTTCTTCGGACCAGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCGGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGATACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGTCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Davallia_fejeensis_OQWW ---------------------------------------------------ATCGATTTG---TCTGAGGCTTCTTCCTCCTCCTCCTCTTCT---------------------CGAGACGTGCTCGACCCTCCCGGCTTCTCCCGTTCTTCTTTGGATCTGGATGAG---TCTGCAGCTGGTCGGCAAAAAAAGGACACAGATACTTCATGGAAGCAGCAAAAAGCATGGGAAATTGCACAAGCACCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCAGCCTTGTGGCAACCCATCAGTGCACTCCAGAGCGTAGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACGGACACGTTGCTTCCCAAGCTTGTTTTCATAAGTCTGAATGCAGCTGGATTAGCTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCGACACATGCATCAGACTGGGTGTCCTCCCTTCCACCACCTGCGATGGTTGAATTTTCAGGAGGGGGGATTCCTTTCAAGTGA Dennstaedtia_davallioides_MTGC ATGGAGAAGGGT---GCAGCCAAAGGAACCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCTTCCTCCTCTTCT------------------------CGAGACGTCCCTGACCCCCCCGGCTTCTCTCGATCTTCTTTGGATCTGGATGAT---GCTGTGGCTGGCCGTCAAAAGAAGGAGACAGATACGCCATGGAAGCAACAAAAAGCATGGGAGATGGCACAAGCGCCTTTCAAGAACCTGCTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGTAGCACCGTTCACTTGTTCAGCATTGGGATCACGATCTCAGCTTTGTGGCAACCCATCAGCGCACTCCAAAGTGTCGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGGACAGACACCCTACTTCCTAAGCTGGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTTAATACGCTTGGCCTACTTCCTACGCACGTATCTGATTGGGTATCCTCACTTCCACCACCGGCAATGGTTGAATTCTCAGGAGGGGGGTTTCCATTTAAGTAA Deparia_lobatocrenata_FCHS ATGGAGAAGGGC---GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCCTCCTCCTCCTCCTCCTCCTCTTCT---------------CGAGACGTTCCTGATCCTCCCGGCTTCTCCCGATCTTCTTCGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAAGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGG------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCGGCTTTGTGGCAACCCATCAGTGCACTCCAAAGTGTCGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCACCAATGGTTGAATTTTCGGGAGGGGGGTTTCCATTCAAGTGA Didymochlaena_truncatula_RFRB ATGGAGAAGGGT---GCAGGGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCCTCCTCCTCTTCT---------------------------CGAGACGTGCCCGACCCTCCCGGCTTCTCCCGATCGTCGTTGGATCTGGATGAA---GCTGCAGCTGGTCGGCAA---AACGTGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGA------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTGCACTTGTTCAGCATTGGGATCACAATCTCAGCCTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGAGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTTCTTCCCAAGCTTGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACTCTTGGTCTTCTTCCTACACATGCATCGGATTGGGTGTCCTCACTTCCCCCACCAGCAATGGTTGAATTTTCAGGAGGGGGGGTTCCATTCAAGTGA Diplazium_wichurae_UFJN ATGGATAAGGGC---GCAGCGAAAGGGGCCACC------CGAAAGTGGGCGATCGAATTC---TCTGAGACTTCTTCCTCCTCCTCCTCTTCT---------------------CGCGACGTGTCTGATCCTCCCGGATTCTCCCGATCTTCTTCGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGACAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGTATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCTTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCCGATTGGGTGTCCTCTCTTCCACCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Dipteris_conjugata_MEKP ATGGACAAAGTG---ACGATGAAAGGA---GGC------CGCAAATGGGCTATTGATCTA---TCTGAGGCTTCGTCTTCCTCCTCT---------------------------CGCGATGTATCTGATCCTCCTGGTTTCTCTCGAGCGTCTATGGATTTGGATGAG---ACAGGAGCTGGTCGTCAGAAAAAGGATATGGATACATCTTGGAAACAACAAAAAGCCTGGGAGGTTGCTCAAGCACCTTTCAAAAATCTACTCATGATGGGC------------------------------TTCATGATGTGGATGGCGGGTAATACTGTACACTTATTCAGCATTGGAATCACTATCTCGGCACTCTGGCAACCTATAAGTGCTCTCCAGGGTGTTGGCAAAGTTTTTGAGCCTTTTCAGGATGCTCGGACAGATATCCTACTCCCCAAGCTTGTTTTTATTTCTCTCAACATTGCAGGTTTACTACTGGGTCTCTGGAAGCTGAACTCGCTTGGCCTTCTTCCAACACATGCATCAGATTGGGTGTCTTCCCTTCCTCCTCCACCAATGGTTGAGTTTTCAGGAGGGGGGGTTCCATTTACTTGA Encephalartos_barteri_GNQG ATGGACAAGAGA---------GGG---TACGTC------CGCAAATGGGCGATAGATCTT---TCAGAACCAAGCAATTCCTCT------------------------------AGGGATATCCCAGACCCGCCTGGCTACAACAGAGCCTCTCTCGAATTGGATGAG---AAAGGGGGCGGGCAGCAAAAGAAGGAAGCGGAGGCCGCATGGAAATTGCAGAAGGCTTGGGAAGTGGCTCAAGCCCCTCTCAAGAATTTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGGAGTACGGTACATTTGTTTAGTATTGGGATCACTTTCAGTGCACTTTGGCAGCCTATTAGTGCACTTCAGGGTGTTCGCAAAGTTTTTGAGCCTTACCAGGATGCACGAATTGATATTCTATTACCCAAAGTAGTCTATGTTGCTTTGAATCTTGCAGGTCTGCTGCTAGGCATCTGGAAGCTGAATACTCTAGGACTCTTGCCTACTCATCCATCTGACTGGGTGTCCTCTTTACGGCCTGCTCCGGAAGTTGAATTCTCTGGCGGTGGCATTCCATTTGTTTGA Ephedra_sinica_VDAO ATGGACAACAGG---------AAGGGC------------AGGAGATGGGCGGTTGATTTC---TCAGATTCCTCGTCGTCC---------------------------------CGTGACATCGCCGATCCTCCGGGTTTCGATCGTTCCTCTCCCGAATCCGAGGAC---AACTCCAACGCCAAGCAGAAAAAAGAAGCGGAATTGGCATGGAAACAATCGAAGGCTTGGGAAATTGCACAAGCGCCTTTTAAGAATTTGCTTATGATGGGA------------------------------TTTATGATGTGGATGGCTGGGAGCACTGTGCATCTGTTCAGTATTGGAATTACATTTTCTGCTCTCTGGCAACCAATTAGTGCCCTCCAGGGGGTTGGAAAAGTATTTGAGCCATTTCAAGATTCAAGATTAGACCTCATGCTTCCAAAACTTGTATTTATCGCTTTGAACTTTGCTGGGATGCTTCTAGGAGTTTGGAAGTTGAACACCTTAGGACTATTGCCAACTCATCCATCAGATTGGGTGTCTTCACTTGCACCAGCTCAGGAAATCGACTACTCTGGAGGTGGAGTT---TTTATTTAA Equisetum_diffusum_CAPN ATGGAGAAGGTA---GGGAGAGGAGGAGGG---------CGCAGATGGGCCATCGATCTGAAATCCGACAGCCCTTCTTCATCC------------------------------CGAGACGTTGCAGACCCCCCTGGCTACTTCCCTGCTGCGTTTGATCAGGATGAC---TCTGCGCTGAGCCGGCAGAAAAAGGAGGTGGATAGCGCTTGGAAACAACAGAAAGCGTGGGAGGTGGCTCAAGCACCCTTTAAAAACCTTTTGATGATGGGC------------------------------TTCATGATGTGGATGGCGGGAAATACAGTACATCTGTTCAGTATTGGCATCACGGTTTCAGCACTTTGGCAGCCCGTTAGTGCTCTCAAAGGAGTGGGTAAATTTTTTGAGCCTTATCAGGATGCAAAGACGGATACCCTCCTCCCAAAAGTGGTTTACATACTACTAAATGTGGCAGGATTACTTCTAGGGCTATGGAAGCTTAATACGCTTGGATTATTGCCAACTCATGCATCGGATTGGGTGTCTTCACTTCCTCCACCTCCAATGGTTGAGTTCTCTGGTGGTGGCTCTCCTTTTAACTAG Equisetum_hyemale_JVSZ ATGGAGAAGGTA---GGGAGAGGAGGAGGG---------CGCAGATGGGCCATCGATATGAAATCCGACACCTCTTCTTCATCC------------------------------CGTGATGTCGCCGACCCCCCTGGCTATTCCCCCGCAGCATTTGATCAGGATGAG---TCTGCGCTGAGCCGGCAGAAAAAGGAGGTGGATAGTGCTTGGAAGCAACAGAAAGCGTGGGAGGTAGCTCAAGCACCCTTTAAAAACCTTTTCATGATGGGC------------------------------TTCATGATGTGGATGGCGGGAAATACAGTACATCTGTTCAGTATTGGCATCACTGTTTCAGCGCTTTGGCAGCCTATTAGCGCTCTCAAAGGAGTGGGTAAATTTTTCGAGCCTTATCAGGATGCAAAGACGGATACCCTCCTCCCAAAGGTGGTTTACATATTACTGAATGTGGCGGGATTACTTCTAGGACTATGGAAGCTTAATTCGCTTGGATTACTGCCGACTCATGCATCGGATTGGGTGTCTTCACTTCCTCCACCTCCAATGGTTGAGTTCTCTGGTGGCGGCTCTCCTTTTAACTAG Gaga_arizonica_DCDT ATGGAGAAGGGC---------AAGGTAGGCGCT------CGCAAGTGGGCTATTGATTTT---TCTGAGACTGCTTCCTCC---------------------------------CGCGATGTGCCGGACCCACCCGGATTCTCTCGAACTTCCTTGGATCTGGATGAG---GCTGCGGCTGGTCGCCAAAAGAAGGAGACCGATGCACCTTGGAAGCAGCAAAAAGCATGGGAGGTAGCGCAAGCTCCTTTCAAAAACCTGCTCATGATGGGC------------------------------TTCATGATGTGGATGGCCGGCAGCACCGTCCATTTGTTCAGCATTGGAATCACAGTCTCAGCTTTGTGGCAGCCTATCAGCGCACTTCAAAGTGTGGGAAAAGTGTTTGAGCCTTTTCAGGATGCGCGGACGGACACCCTGCTTCCTAAGCTTGTGTTTATATGCTTGAATGTTGCTGGTTTACTTCTAGGGCTGTGGAAGCTTAACACACTAGGCCTTCTTCCGACACATGCATCTGATTGGGTGTCGTCTCTTCCACCACCACCAATGGCTGAGTTCTCTGGTGGGGGGTTTCCATTCAAGTGA Ginkgo_biloba_SGTW ATGGAGAGGAAA---------GGAGGGTACGTC------CGAAAATGGGCAATTCAGCTC---TCAGATTCAACGCATTTCCCA------------------------------AGGGCCGTCCCCGATCCTCCTGGTTACGACCGCACATCTCTAGAATTGGATGAG---AGTGCCAGTGGTCGGGAAAAGAAGGAAGTCGAAGCGACATGGAAAGCACAGAAAGCTTGGGAAGTGGCTCAAGCCCCTTTCAAGAATTTGTTTATGATGGGATTCATGATGTGGATGGCTGGGAGTAC??GATTCATGATGTGGATGGCTGGGAGTACAGTGCATTTGTTTAGTATTGGGATCACTTTCTCAGCTCTTTGGCAGCCTATTAGTGCTCTTCAGGGTGTTGGAAAAGTTTTCGAGCCTTATCAGGATTCACGAATAGACACACTACTACCTAAAGTAGTCTACATTGCCTTGAACCTAGCAGGGTTACTGTTAGGCATCTGGAAGTTGAACACATTAGGACTTCTGCCAACCCATGCTTCTGACTGGGTGTCATCTCTGTCTCCAGCTCCTGAAATCGAATATTCTGGCGGTGGGATTCCCTTCACATAG Gymnocarpium_dryopteris_HEGQ ATGGAGAAGGGT---GCAGCGAAAGGGGTCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCCTCCTCCTCCTCCTCTTCT---------------------CGAGACGTGCCTGACCCTCCCGGCTTCTCTAGATCTTCTTCGGATCAGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCGGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACTTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCCGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGTTTTCCATTCAAGTGA Homalosorus_pycnocarpos_OCZL ATGGAGAAGGGC---GCAGCGAAAGGGGCTACC------CGCAAGTGGGCGATCGACTTC---TCTGAAACCTCGTCGTCCTCCTCCTCCTCCTCTTCT---------------CGAGACGTTCCTGACCCTCCCGGCTTCTTCCGATCTTCTTCGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTCCAAAGCCTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTTGTTTTCATATGTCTGAATGTTGCTGGTTTACTGCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTGTCTTCACTTCCGCCACCAGCAATGGTTGAATTTTCAGGAGGGGGGGTTCCATTCAAGTGA Hymenophyllum_bivalve_QIAD ATGGACAAAGCG---GTAATGAAAGGAGCAGGC------CGCAAATGGGCTATTGATCTG---TCTGAGAGTCCATCGTCTTCT------------------------------CGGGATGTGCCAGACCCTCCTGGGTTTTCTCGAGCTTCTGTGGATCTGGATGAG---ACTGGAGTTGGTCGTCAAAAAAAGGAAATGGATACGTCTTGGAAGCAACAGAAAGCATGGGAGGTTGCACAAGCACCTTTTAGAAATCTATTTATGATGGGA------------------------------TTTATGATGTGGATGGCGGGTAACACTGTACACTTGTTCAGCATCGGAATCACAATCTCAGCACTCTGGCAACCTATAAGTGCTCTCCAGGGTGTTGGCAAATTTTTTGAGCCTTTTCAGGATGCCCGGACAGATATTCTACTTCCCAAACTTGTTTACATATGTTTGAATATTGCAGGTTTACTGCTGGGTCTTTGGAAGCTGAACTCACTTGGTCTTCTTCCAACACATGCATCAGACTGGGTGTCGTCTCTTCCTCCACCACCAATGATTGAATTTTCAGGAGGAGCAGTTCCATTCACTTAG Hymenophyllum_cupressiforme_TRPJ ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTAACACTGTACACTTGTTTAGCATTGGAATCACAATCTCAGCACTCTGGCAACCTATAAGTGCTCTCCAGGGTGTTGGCAAATTTTTTGAGCCTTTTCAGGATGCCCGGACAGATATTCTACTTCCCAAACTTGTTTACATATGTCTAAATATTGCAGGTTTACTGCTGGGTCTTTGGAAGTTGAACTCACTTGGTCTTCTTCCAACACATGCATCAGACTGGGTGTCGTCTCTTCCTCCACCACCAATGATTGAATTTTCAGGAGGAGCAGTTCCATTCACTTAG Illicium_parviflorum_ROAP ATGGAGAAGGGC---------AAGGGTCTCGCT------CGAAGATGGGCGATCGATTTC---TCTGACAACTCCTCACCTTCTTCT---------------------------CGAGATCTTCCAGACCCCCTCGGTTTCGTTAGGGCTTCCCAAGAACAGGATGAT---TCT---GTTAGCCGTCAAAAGAAGGATTCTGAGGCTGCTTGGAAATCACAGAAAGCTTGGGAAGTGGCTCAGGCTCCTTTCAAGAATTTGTTAATGGTGG--------------------------------------------------GGAAGCACAGTTCATTTGTTCAGCATTGGTATCACATTCTCCGCTCTTTGGCAGCCCATAAGTGCTCTTCAAAGCGTTGGGAAGGTTTTTGAACCTTACAAGGATTCTAAAGTTGATATTCTTGGGCCCAAGTTACTTTTTATTGCCTTAAACCTGGTGGCGTTAGCGTTGGGTGTCTGGAAGCTGAATACGCTAGGCCTTCTTCCTACTCATGCATCAG?T------TCTTCGCTTCCCCCCCCTCAGGATGTCGAATATTCCGCTGGTGGTCTTCCATTTCTTTGA Leucostegia_immersa_WGTU ATGGAGAAGGGT---GCAGCGAAGGGAGCCGCC------CGGAAGTGGGCTATCGACTTC---TCTGAGGCTGCCTCCTCC---------------------------------CGAGACGTGCCCGATCCACCCGGCTACTCCCGATCTTCTTTGGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAAAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAGTTGCACAAGCACCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCATTTGTTCAGCATTGGGATCACAATCTCAGCCTTGTGGCAACCCATCAGTGCACTCCAAAGTGTCGGCAAAGTGTTTGAGCCTTTCCAGGATGCTCGAACAGACACCCTGCTGCCCAAGCTTGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTGGGGCTTTGGAAGCTCAATACTCTTGGTCTTCTTCCTACACATGCATCAGATTGGGTGTCCTCACTTCCGCCACCAGCAATGGTTGAATTTTCAGGAGGGGGGGTTCCATTCAAGTGA Lindsaea_linearis_NOKI GGAGAAAGCATG---GCAGCCAAAGGAGCCTCTGGC---CGCAAGTGGGCGATCGACCTC---TCTGAGACTTCCTCTTCC---------------------------------AGGGATGTTGCCGATCCTCCGGGGTTTTCTCGTTCATCTCTAGATCTGGATGAG---GCTGCAGCTGGTCGCCAGAAGAAGGAGGAAAATGTGTCATGGAAGCAACAAAAAGCGTGGGAGGTTGCCCAGGCTCCTTTTAAGAACCTCTTCATGATGGGC------------------------------TTCATGATGTGGATGGCTGGTAGCACCGTCCATTTGTTTAGCATTGGGATCACCATCTCTGCCTTGTGGCAACCCATAAGCGCGCTTCAGAGTGTTGGTAAAGTTTTTGAGCCTTTTCAGGATGCACGAACAGACACTCTTCTTCCTAAGCTTGTATTCATTTGTTTGAACATTGCGGGTTTACTCCTTGGCCTTTGGAAGCTCAACACTCTTGGCCTTCTTCCCACACATGCATCCGATTGGGTGTCGTCTCTTCCACCACCACCTATGGTTGAGTACTCTGGAGGAGGGCTGCCATTCCAGTGA Lindsaea_microphylla_YIXP GGAGAAAGCATG---GCAGCCAAAGGAGCCCCTGGC---CGCAAGTGGGCGATCGACCTC---TCTGAGACTTCCTCTTCC---------------------------------AGGGATGTTGCTGATCCTCCGGGGTTTTCTCGTTCATCTCTAGATCTGGATGAG---GCTGCAGCTGGTCGCCAGAAGAAAGAGGAAAATGTGTCATGGAAGCAACAAAAAGCGTGGGAGGTTGCCCAGGCTCCTTTTAAGAACCTCTTCATGATGGGC------------------------------TTCATGATGTGGATGGCTGGTAGCACCGTCCATTTGTTTAGCATTGGGATCACCATCTCTGCCTTGTGGCAACCCATAAGCGCGCTTCAGAGTGTTGGTAAAGTTTTTGAGCCTTTTCAGGATGCGCGAACAGACACTCTTCTTCCTAAGCTTGTATTCATTTGTTTGAACATTGCGGGTTTACTCCTTGGCCTTTGGAAGCTTAACACTCTTGGCCTTCTTCCCACACATGCATCCGATTGGGTGTCGTCTCTTCCACCACCACCTATGGTTGAATACTCTGGAGGAGGGCTGCCATTCCAGTGA Lygodium_japonicum_PBUU ------AAGATG---TCG---AAAGGAACAAAT------CGCAAGTGGGCTATTGACCTG---TCAGAACCTTCTTCCTCAACTTCA---------------------------AGAGATGTGCCGGATCCTCCGGGTTTCTCTCGATCTTTCTTAGATTTGGATGAA---GCTGGAGCCAGTCGTCAGAAAAAGGAGGTGGACACATCTTGGAAGCAGCAAAAAGCATGGGAAGTGGCCCAGGCACCTTTCAAAAATTTATTCATGATGGGA------------------------------TTTATGATGTGGATGGCGGGTAATACTGTGCACTTGTTCAGCATTGGAATCACAATCTCAGCACTTTGGCAACCTTTAAGTGCCCTCCAAAGTGTAGGCAAAGTATTTGAGCCTTTTCAGGATGCTCGGACGGATATATTACTTCCAAAACTTGTCTTCATATTTTTAAACATTGCAGGCTTACTTTTGGGTCTGTGGAAGCTGAATTCTCTTGGCCTTCTTCCCACGCATGCATCAGACTGGGTCTCGTCGCTGTCCCCTCCACCAATGGTTGAATTTTCTGGAGGTGGGGTGCCATTCAGTTGA Myriopteris_rufa_GSXD ATGGAGAAGGGC---------AAGGGAGGCGCT------CGCAAGTGGGCTATCGATTTT---TCTGAGGCTGGTTCCTCC---------------------------------CGCGATGTGCCCGACCCTCCCGGATTCTCTCGATCTTCCTTGGATCTGGATGAG---GCTTCGGCTGGTCGCCAAAAGAAGGAGACCGATATCTCATGGAAGCAACAAAAAGCATGGGAGGTAGCACAAGCTCCTTTCAAAAACCTGCTCATGATGGGC------------------------------TTCATGATGTGGATGGCCGGCAACACCGTACATTTGTTCAGCATTGGAATCACAATCTCAGCATTGTGGCAGCCTATCAGCGCACTTCAAAGCGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCGCGAACGGACACCCTGCTTCCTAAGCTTGTGTTCATATGCTTGAATGTTGCTGGTTTACTTCTAGGGCTGTGGAAGCTTAACACACTGGGCCTTCTTCCTACACATGCATCTGATTGGGTGTCGTCTCTTCCACCACCACCGATGGCTGAGTTCTCTGGAGGTGGGGTTCCATTCAAGTGA Nephrolepis_exaltata_NWWI ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTTTCAAAAACCTGTTCATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACCTGTTCAGCATTGGGATCACAATCTCAGCGTTGTGGCAACCCATCAATGCACTCCAAAGTGTGGGTAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACTGACACCCTACTTCCCAAGCTCGTTTTCATATGTCTGAATGTTGCTGGGCTACTCCTTGGGCTTTGGAAGCTCAACACTCTTGGTCTTCTTCCTACGCATGCGTCGGACTGGGTGTCCTCACTTCCACCACCAGCTATGGTTGAATTTTCAGGAGGGGGGGTTCCATTCAAGTGA Notholaena_montieliae_YCKE ATGGAGAAGGGC---------AAGGGAGGCGCT------CGCAAGTGGGCTGTCGATTTT---TCTGAGGCTGCTTCCTCC---------------------------------CGCGATGTGCCCGACCCACCTGGATTCTCTCGATCTTCTTTGGATCTGGATGAG---GCTGTAGCTGGTCGCCAAAAGAAGGAGACCGATATCTCATGGAAGCAGCAAAAAGCATGGGAGGTAGCGCAAGCCCCTTTCAAAAACCTGCTTATGATGGGC------------------------------TTTATGATGTGGATGGCCGGCAGCACCGTCCATTTGTTCAGCATTGGAATCACAATCTCAGCATTATGGCAACCTATCAGCGCACTTCAAAGTGTTGGCAAAGTGTTCGAGCCTTTCCAGGATGCACGGACAGACACCTTGCTTCCTAAGCTTGTGTTTATATTCTTGAATGTTGCTGGCTTACTTCTAGGGCTATGGAAGCTTAACACACTAGGACTTCTTCCGACGCATGCATCTGACTGGGTGTCATCTCTTCCACCACCACCAATGGCTGAGTTCTCCGGAGGGGGGGTTCCATTCAAGTGA Nuphar_advena_WTKZ ---------------------------------------------TGGGCGATCGATCTC---------ACCACCACCAGCGATTATTCCTCTTCTTCC---------------CGCGACGTCCCCGATCCCCTGGGCTTCACTAGCTCCTCCCAAGAGCCCGAGGATGGTGCTGGCGGCAGCCGTCAGAAGAAGGAAACAGAGGCAGCATGGAAGGCGCAGAAAGCCTGGGAAATAGCTCAAGCCCCTTTCAAGAATTTGTTAATGATGGGT------------------------------TTCATGATGTGGATGGCGGGAAATACAGTGCATTTGTTTAGCATTGGCATCACATTCTCAGCTCTTTGGCAGCCCATAAGTGCCCTTCAGGGTGTTGGTAAAGTTTTTGAGCCTTACAAGGATTCAAGAGTAGATATTCTTGCACCCAAATTGGTATTTATCGCCCTTAACCTTGCAGCAATGGCATTGGGTATTTGGAAGCTGAATACTCTTGGCCTTCTTCCCACCCATGCGTCTGATTGGGTTTCATCCCTGCCACCTGCTCAGGAGGTTGAATATTCTGGTGGGGGTCTTCCATTTGCCTGA Onoclea_sensibilis_HTFH ATGGAGAAGGGC---GCAGCGAAAGGGGCCACT------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCTTCTTCCTCCTCCTCTTCT---------------------CGAGACGTACCTGACCCTCCCGGCTTCTCCCGATCTTCTTCAGATCTGGATGAG---GCTGCAGCTAGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACCATCTCAGCTTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCAGGAGGGGGGTTTCCATTCAAGTGA Ophioglossum_petiolatum_WTJG ATGGAGAAATCC---TCAGTCAAAGGG------------AGGAAGTGGGCGATTGATTTA---TCTGATGTTTCATCATCATACACT---------------------------CGAGATGTGGCTGATCCTCCTGGCTTCACACGATCTACATCCGACCTGGATGAG---GCAGCAAGTGGTCGACAAAAGAAAGAAACTGACGGAACTTGGAAACAGCAGAAAGCATGGGAAGTAGCACAAGCACCACTAAAAAATCTCTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGGAATACTGTACACTTATTCAGCATCGGAATTACTTTCTCAGCACTTTGGCAACCTTTAAGTGCCCTTCAGGGTGTCAAAAAAGTATTTGAACCTTATGAGGATGTACGGACAGATATCATGCTTCCAAAGCTTGTTTATGTGCTTCTAAATGTTGCAGGTCTTTTTTTGGGTTTGTGGAAGTTAAACTCTCTTGGACTTTTGCCAACACATGCATCAGATTGGGTTTCATCTCTTCCCCCACCTCCTATGGTTGAATATTCAGGAGGAGGAATCCCATTTAACTGA Ophioglossum_sp_QHVS ATGGAGAAATCC---TCAGTCAAAGGG------------AGGAAGTGGGCGATTGATTTA---TCTGATGTTTCATCATCATACACT---------------------------CGAGATGTGGCTGATCCTCCTGGCTTCACACGATCTTCATCCGACCTGGATGAG---GCAGCAAGTGGTCGACAAAAGAAAGAAACTGACGGAACTTGGAAACAGCAGAAAGCATGGGAAGT?????????????????????????????????????------------------------------?????????????????????????????????????????????????????????????????????CAACCTTTAAGTGCCCTTCAGGGTGTCAAAAAAGTATTTGAACCTTATGAGGATGTACGGACAGATATCATGCTTCCAAAGCTTGTTTATGTGCTTCTAAATGTTGCAGGTCTTTTTTT?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Osmunda_javanica_VIBO ATGGATAAGGTG---ACAACAAAAGGTGTGGGA------CGGAAATGGGCGATTGACCTG---TGCGACTCTTCTTTTTCTTCATCT---------------------------CGTGACGTGCCTGATCCTCCTGGTTTCTCTCGATCTTCTTTGGATCTGGATGAG---AGTGGAACTGGTCGACAAAAAAAGGAATTGGATACCTCTTGGAAGCAACAAAAAGCATGGGAGGTAGCACAAGCTCCTTTCAGAAATCTGTTTATGATGGGC------------------------------TTTATGATGTGGATGTCCGGGAACACCGTACACTTGTTCAGTATTGGAATCACAATCTCAGCACTCTGGCAACCTATAAGTGCTCTTCAGGGTGTTGGAAAAGTCTTTGAACCCTTCCAGGATGCACGAACAGATATTCTACTCCCAAAGATTGTTTACATAGCTCTGAATTTAGCAGGTCTGCTGCTGGGTCTCTGGAAGCTGAACTCACTTGGACTTCTTCCAACACATGCATCGGATTGGGTGTCTTCTCTTCCTCCACCTCCAGTGGTTGAGTTTTCAGGAGGGGGGGTACCTTTCACTTAG Osmunda_sp_UOMY ATGGATAAGGTG---ACAACAAAAGGTGTAGGA------CGGAAATGGGCGATTGACCTG---TGTGACTCCTCTTTTTCGTCATCT---------------------------CGTGATGTGCCTGATCCTCCTGGTTTCTCTCGATCTTCTTTGGATCTGGATGAG---AGTGGGACTAGTCGACAAAAAAAGGAATTGGATACCTCTTGGAAGCAACAAAAAGCATGGGAGGTAGCACAAGCGCCTTTCAGAAATCTGTTTATGATGGGC------------------------------TTTATGATGTGGATGTCCGGGAACACCGTACACTTGTTCAGTATTGGAATCACCATCTCAGCCCTCTGGCAACCTATAAGTGCTCTTCAGGGTGTTGGAAAAGTTTTTGAACCCTTCCAGGATGCACGAACAGATATTCTACTCCCAAAGATTGTTTACATAGCTCTGAATTTAGCAG-TCTGCTGCTGGGTCTCTGGAAGCTGAACTCACTTGGGCTTCTTCCAACTCATGCATCGGATTGGGTGTCTTCACTTCCTCCACCTCCAGTGGTTGAGTTTTCAGGAGGGGGGGTTCCTTTCACTTAA Parahemionitis_cordata_ZXJO ATGGAGAAGGGC---------AAGGGAGGCGCG------CGCAAATGGGCTATTGATTTT---TCTGAGGCTGCTTCTTCC---------------------------------CGCGATGTGGCCGACCCACCTGGATTCTCTCGGTCTTCCTTGGATCTGGATGAG---GCTGCAGCTGGTCGCCAAAAGAAAGAGTCTGATACCTCATGGAAGCAGCAAAAAGCATGGGAGGTAGCACAAGCTCCTTTCAAAAACCTGCTCATGATGGGC------------------------------TTCATGATGTGGATGGCCGGCAACACCGTTCATTTGTTCAGCATTGGAATCACAATCTCAGCATTATGGCAGCCTATTAGCGCACTTCAAAGTGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCGCGGACGGACACCCTGCTTCCTAAGCTTGTGTTTATATGCTTGAATGTTGCTGGTTTACTCCTAGGGCTGTGGAAGCTTAACACACTAGGCCTTCTTCCTACACATGCATCTGATTGGGTGTCATCTCTTCCACCACCACCAATGGCTGAGTTCTCCGGAGGGGGGATTCCATTCAAGTGA Peperomia_fraseri_XSZI ATGGACAAGGGA------AACAAGGCTCTACCT------CGGAGATGGGCGATCGATTTC---ACCGACGCCTCTCCTCCC---------------------------------CGCGACGTCCCCGACCCTCTCGGCTTCGACCGATCTTCTCAAGACCAGGATGAC---TCTACGGTGAGCCGGCAGAAGAAAGAAGCCGAATCTGCTTGGAAATCACAGAAAGCTTGGGAAGTGGCGCAAGCCCCAATGAAGAACTTGTGCATGATGGGT------------------------------TTCATGATGTGGATGGCTGGAAGCACTGTTCATTTATTTAGCATAGGCATCACATTTTCTGCACTTTTTCAACCACTTACTGCCCTTCAAAGCGTTGGAAAAGTGTTTGAGCCTTTTAAAGATCCTAGAGTGGATACCCTTGCACCAAAGTTGGTTTTCATCGCTCTGAATCTAGCAGGCTTGGCATTAGGTGTTTGGAAGCTAAACACGCTAGGACTTCTTCCTACGCATGCTTCTGACTGGGTGTCATCCTTGCCGCCACCTCCGGAGGTTGAATTTTCTGGAGGTGGGATACCACTGTATTGA Phlebodium_pseudoaureum_ZQYU ----------------------------------------------------------------------CTTCCTCTTCTTCCTCCTCCTCCTCCTCTTCT------------CGGGACGTGGCCGACCCCCCTGGATTCTCCCGATCCTCTTTGGATCTGGATGAG---AGTGCAGCAGGTCGGCAAAAGAAGGACGCAGACACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCTCAAGCGCCTTTCAAAAACCTGTTCATGATCGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCAGCCTTATGGCAACCCATCAGCGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACGTTACTTCCCAAGCTCGTTTTCATATGTCTGAATGTGGCTGGATTGTGTCTAGGGGTTTGGAAGCTCAATACCCTTGGTCTTCTTCCTACACATGCATCAGACTGGGTGTCCTCTCTTCCACCTCCAGCAATGGTTGAATTCTCAGGAGGGGGGTTTCCTTTCAAGTAA Phymatosorus_grossus_ORJE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGGTCGGCAAAAGAAGGACGCAGACACCTCATGGAAGCAACAAAAAGCGTGGGAAATTGCACAAGCTCCTTTCAAAAACCTGTTCATGATTGGC------------------------------TTCATGATGTGGAGGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCAGCCTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACATTACTACCCAAGCTCGTTTTCATATGTCTGAATCTTGCTGGATTATGTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACGCATGCATCAGATTGGGTGTCCTCTCTTCCACCTCCAGCTATGGTTGAATTTTCAGGAGGGGGTTTTCCTTTCAAGTGA Pilularia_globulifera_KIIX ATGGATCACAGCAGC------AAATCCAAATGGGCAGGCCGAAAATGGGCCGTGGATCTT---TCAGAGGCTTCTTCTTCATCATCTTCATCTTCC------------------CGAGACGTGGCAGATCCTCCTGGCTTCTCCCGGGCCTCCATGGATATGGATGAG---TCCACAGCAGGTCGTCAGAAGAAGGAGATGGACATGTCATGGAAGCAGCAGAAAGCATGGGAGGTTGCTCAAGCGCCATTCAAGAACTTGTTCATGATGGCA------------------------------TTCATGATGTGGATGGCTGGAAACACAGTTCACTTGTTTAGCATTGGAATCACCATCTCCGCCTTATGGCAGCCTGTCAGCGCACTGAAAAGTGTTGGAAAAGTGTTTGAGCCTTTCCAGGATGCTCGGACAAGCATGTTAGTTCAGAAGCTTGTTTTTGTGGCCCTCAACGTCGCAGGCCTAATGGTAGGCCTTTGGAAGCTTAATTCTCTTGGCCTGCTTCCGACTCATGCATCTGATTGGGTGTCTTCCCTTCCTCCAGCACCAATGGTTGAATTCTCAGGAGGGGGGGTTCCATTCTATTAG Pityrogramma_trifoliata_UJTT ATGGAGAAGGGC---------AAGGGAGGCGCC------CGCAAATGGGCTATCGACTTT---TCTGAAACAGCTTCTTCC---------------------------------CGCGACGTACCTGATCCTCCCGGATTTTCTCGATCTTCATTGGATCTGGATGAGGCCATGGTGGATGGTCGCCAAAAGAAGGCAGCGGATCTCTCATGGAAACAGCAAAAAGCTTGGGAGGTAGCACAAGCTCCCTTGAAGAACCTGCTGATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCATTTGTTCAGCATCGGAATCACAATCTCAGCATTGTGGCAGCCTATTAGCGCACTTCAAAGCGTAGGCAAAGTATTTGAACCTTTTCAGGATGCCCGAACTGACACACTGCTTCCCAAGATCGTTTTTATATGTGTAAA???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Plagiogyria_japonica_UWOD ATGGACAAGGTG---GCACCAAAAGGAACGAGC------CGCAAGTGGGCGATCGATCTC---TCAGAGGCTTCTTCTTCATCTTCT---------------------------CGAGATGTGCCCGATCCTCCCGGCTTCTCTCGAACTTCTTTGGATCTGGATGAG---GCTGTAGCTGGTCGCCAAAAGAAGGAGACAGATACATCGTGGAAACAACAAAAAGCATGGGAGGTTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCCGGTAGCACTGTTCACTTGTTCAGCATCGGAATCACAATCTCAGCCCTGTGGCAACCCATAAGCGCGCTCCAGGGTGTCGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGGACAAATACTCTACTTCCCAAGCTCGTTTACATATCCCTGAACATGGCAGGTCTACTTCTAGGTCTTTGGAAGCTTTACTCGCTTGGTCTTCTTCCAACACATGCATCTGATTGGTTGTCTTCTCTTCCACCACCACCAATGGTTGAGTTCTCAGGAGGGGGCATTCCATTCAATTAA Pleopeltis_polypodioides_UJWU ATG------------GCAGCAAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCATCCTCCTCCTCCTCTTCT------------------CGGGACGTGGCCGACCCTCCCGGGTTCTCCCGATCTTCCTTGGATCTGGATGAG---AGTGCAGTAGGTCGGCAAAAGAAAGACGCAGACACCTCATGGAAGCAGCAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTCATGATCGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCCTTATGGCAACCCATCAGCGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCCTTTCAGGATGCTCGAACAGACACATTACTTCCCAAGCTTGTTTTCATATGTCTGAATGTTGCTGGATTATGTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCAGACTGGGTGTCCTCTCTTCCACCTCCGGCAATGGTTGAATTCTCAGGAGGGGGGGTTCCTTTCAAGTGA Polypodium_amorphum_YLJA ATG------------GCAGCAAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCTTCCTCTTCCTCCTCTTCT------------------CGGGACGTAGCCGACCCTCCTGGATTCTCCCGATCTTCTTTGGATCTGGATGAG---AGCGCAGCAGGTCGGCAAAAGAAGGACGCAGACACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTCATGATCGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCCGCCTTATGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACGTTACTTCCCAAGCTCGTTTTCATATGTCTGAATGTTGCTGGATTATGTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCAGACTGGGTGTCCTCTCTTCCACCTCCGGCAATGGTTGAATTCTCAGGAGGGGGGGTTCCTTTCAAGTGA Polypodium_glycyrrhiza_CJNT ATG------------GCAGCAAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCTTCCTCCTCCTCCTCTTCG------------------CGGGACGTGGCCGACCCTCCTGGATTCTCCCGATCTTCTTTGGATCTGGATGAG---AGTGCTGCAGGTCGGCAAAAGAAGGACGCAGACACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTCATGATCGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCCGCCTTATGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACATGTTACTTCCCAAGCTCGTTTTCATATGTCTGAATGTTGCTGGATTATGTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCGACACATGCATCAGACTGGGTGTCCTCTCTTCCACCTCCGGCAATGGTTGAATTCTCAGGAGGGGGGGTTCCTTTCATGTGA Polypodium_hesperium_B_IXLH ATG------------GCAGCAAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCTTCCTCCTCCTCCTCTTCG------------------CGGGACGTAGCCGACCCTCCTGGATTCTCCCGATCTTCTTTGGATCTGGATGAG---AGTGCTGCAGGTCGGCAAAAGAAGGACGCAGACACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTCATGATCGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCCGCCTTATGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACATGTTACTTCCCAAGCTCGTTTTCATATGTCTGAATGTTGCTGGATTATGTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCGACACATGCATCAGACTGGGTGTCCTCTCTTCCACCTCCGGCAATGGTTGAATTCTCAGGAGGGGGGGTTCCTTTCAAGTGA Polypodium_hesperium_GYFU ATG------------GCAGCAAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCTTCCTCCTCCTCCTCTTCG------------------CGGGACGTGGCTGACCCTCCTGGATTCTCCCGATCTTCTTTGGATCTGGATGAG---AGTGCAGCAGGTCGGCAAAAGAAGGACGCAGACACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTCATGATCGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTCCACTTGTTCAGCATTGGGATCACAATCTCCGCCTTATGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACGTTACTTCCCAAGCTCGTTTTCATATGTCTGAATGTTGCTGGATTATGTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCAGACTGGGTGTCCTCTCTTCCACCTCCGGCAATGGTTGAATTCTCAGGAGGGGGGGTTCCTTTCATGTGA Polystichum_acrostichoides_FQGQ ATGGAGAAGGGT---GCAGTGAAAGGGGCCATC------CGCAAGTGGGCGATCGACTTC---TCTGAGGCTTCTTCCTCTTCCTCCTCTTCT---------------------CGAGACTTGCCCGACCCTCCAGGCTTCTCCCGCTCTTCTTTGGATCTGGATGAG---GCTGTAGCTGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGTACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATCAGTGCACTTCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCTTACTTCCCAAGCTCGTCTTCATCTGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACTCATGCATCGGATTGGGTGTCCTCACTTCCGCCGCCATCAATGGTTGAATTTTCAGGGGGGGGGTTTCCATTCAAGTGA Psilotum_nudum_QVMR --------------------------------------------------------------------------------------------------------------------------------CCCCCCTGGATTCACGCGATCGGCTATGGACCTGGATG-------------------?CAAAAAAAAGAAACTGACTTAGCTTGGAAACAGCAGAAAGCATGGGAGGTAGCACAAGCACCTTTCAAAAATCTGTTCATGATGGGA------------------------------TTTATGATGTGGATGGCTGGGAACACTGTACACCTGTTCAGTATTGGGATTACTGTCTCAGCACTTTGGCAACCTATAAGTGCCCTTCAGGGTGTAACCAAATTTTTTGAACCGTATCAGGATGCACGGATAGACATTATGCTTCCAAAGCTTGTATATGTGCTTCTTAACATAGCAGGTCTCTTGTTGGGTCTTTGGAAGCTGAACTCACTTGGACTTCTTCCAACACATGCATCGGATTGGGTGTCTTCTCTTCCTCCACCTCCAATGGTGGAATATTCTGGTGGTGGCATTCTTTATAATTGA Pteridium_aquilinum_Contig3731 ATGGAGAAGGGC---GCAGCCAGGGGAGGAACT------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCTTCCGCCTCCTCTTCT------------------------CGGGACGTGTCTGACCCCCCTGGCTTCTCTCGATTGTCTTTGGATCTGGATGAT---GCTGCGGCTGGCCGTCAAAAGAAGGAGACAGATACCTCATGGAAGCAACAAAAAGCATGGGAGGTGGCACAAGCGCCCTTCAAGAACCTGCTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACCGTCCACTTGTTCAGCATTGGAATCACAATCTCAGCTTTGTGGCAACCCATCAGCGCACTCCAAAGTGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGGACAGATACCCTACTTCCTAAGCTGGTTTTCATATGCCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTTAATACTCTTGGCCTACTTCCTACGCATGTATCTGATTGGGTGTCCTCACTGCCACCCCCACCAATGGCTGAATTCTCGGGAGGGGGGATTCCATTT---TAA Pteris_ensiformis_FLTD ATGGAGAAGAGC---------AAG---------------CGTAAATGGGCTATCGACTTC---TCTGAAACCGCTTCCTCT---------------------------------CGCGACGTGCCTGACCCACCCGGATTCTCTCGGGCTTCATTGGATCTGGATGAG---GTTGTGGCTGGTCGTCAAAAGAAGGAGACAGATCTATCATGGAAACAGCAAAAAGCTTGGGAGATAGCACAAGCTCCCTTTAAAAACCTGCTCATGATGGGC------------------------------TTTATGATGTGGATGGCTGGCAACACTGTCCATTTGTTCAGCATTGGAATCACTATCTCAGCATTGTGGCAACCTATTAGTGCACTTCAAAGTGTTGGGAAAGTGTTTGAACCTTTTCAGGATGCTCGAACTGACACGCTGCTTCCTAAGCTTGTTTTCATATGTTTGAATGTTGCTGGCTTACTTCTAGGGCTATGGAAGCTTAACACGCTTGGCCTTCTTCCTACACATGCATCTGACTGGGTATCATCTCTCCCACCTCCACCGATGGCTGAGTTCTCAGGAGGGGGAATTCCATTCAAGTGA Pteris_vittata_POPJ ATGGAGAAAGGC---------AAGGGAGGCGCC------CGCAAATGGGCCATCGACTTC---TCCGAAACCGCTTCCTCC---------------------------------CGCGACGTGCCTGATCCGCCCGGGTTCTCTCGAGCTTCATCGGATCTGGATGAG---GTCGCGGCTGGTCGTCAAAAGAAGGAGACGGATCTCTCATGGAAACAGCAAAAAGCTTGGGAGGTAGCACAAGCTCCCTTCAAAAACCTGCTCATGATGGGC------------------------------TTTATGATGTGGATGGCTGGCAACACTGTCCATTTGTTCAGCATTGGAATCACAATCTCAGCATTGTGGCAACCTATTAGCGCACTTCAAAGTGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACTGACACACTGCTTCCTAAGATTGTTTTCATATGTTTGAATGTTGCTGGCTTACTTCTAGGGCTATGGAAGCTTAACACACTTGGCCTTCTTCCTACACATGCATCTGACTGGGTATCATCTCTGCCCCCACCACCAATGGCTGAGTTCTCTGGAGGAGGGATTCCATTCAAGTGA Sceptridium_dissectum_EEAQ ATGGAGAAGGCA---TCAACCAAAGGC------------CGTAAATGGGCTGTCGAGCTA---TCCGATTCTTCCTCTTCGTCTTCC---------------------------CGAGATGTCCTTGACCCCCCTGGCTTTACGCGATCTGCTTCCGACCTGGATGAG---GTTGCAACTGGTCGACAAAAGAAGGAAATGGATGCAACTTGGAAACAGCAGAAAGCATGGGAAGTAGCCCAAGCACCATTTAAAAATCTATTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGAAATACTGTACACTTGTTCAGTATTGGGATTACATTCTCGGCACTTTGGCAACCTATAAGTGCCCTTCAGGGTGTCAGCAAAGTATTTGAACCATATCAGGATGCACGAACAGACATCATGCTCCCAAAGCTTGTTTATACACTCCTTAATGTGGCAGGCCTCTTGTTGGGTCTTTGGAAGCTCAACTCACTTGGACTTCTGCCAACGCATGCATCAGATTGGGTGTCGTCTCTTCCTCCACCTCCAATGGTTGAATATTCAGGAGCGGGCAATCTATTTGATTAA Sticherus_lobatus_XDVM ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGACAGATATTCTACTTCCAAAGCTTGTTTACATATCTCTGAATATTGCAGGTTTATTATTGGGTCTTTGGAAGCTAAATTCACTTGGCCTTCTTCCAACACATGCATCAGACTGGGTGTCGTCTCTCCCTCCACCTCCAATGGTTGAGTTTTCAGGTGG---GGTGCCATTCACTTAA Thelypteris_acuminata_MROH ATGGAGAAGGGC---GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATAGACTTC---TCTGAGACTTCTTCCTCCTCCTCCTCTTCT---------------------CGAGACGTGCCTGACCCGCCCGGCTTCTCCCGATCTTCTTCAGATCTGGATGAG---GCTGCAGCTGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCCTGGGAAATTGCACAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTGCACTTGTTCAGCATTGGGATCACAATTTCAGCTTTGTGGCAACCCATCAGTGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATTTGTCTGAATGTTGCTGGCTTACTCCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCCACACATGCATCTGACTGGGTTTCCTCACTTCCGCCCCCAGCAATGGTTGAATTTTCAGGAGGGGGGTTTCCATTCAAGTGA Thyrsopteris_elegans_EWXK ------------------------------------------------------------------------------------------------------------------------GTGCCCGATCCTCCCGGCTTCTCTCGAGCTTCTTTGGATCTGGATGAG---GCCGTAGCTGGTCGCCAAAAGAAGGAGACGGATACATCATGGAAGCAACAAAAAGCATGGGAGATTGCACAAGCGCCTTTCAAAAACCTATTTATGATGGGC------------------------------TTCATGATGTGGATGGCCGGCAGCACTGTCCACCTGTTCAGCATTGGAATCACAATCTCAGCCCTTTGGCAACCCATAAGTGCTCTCCAGAGTGTTGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGGACAGACACATTACTTCCCAAGCTTGTTTACATATGCCTGAACGTCGCAGGTTTACTTCTAGGTCTTTGGAAGCTTAACTCGCTTGGCCTTCTTCCAACACATGTATCTGATTGGGTGTCTTCTCTTCCACCACCACCCATGGTTGAGTTCTCAGGAGGGGGGATTCCATTCAATTAA Tmesipteris_parva_ALVQ ATGGAGAAGGGA---GCAGCGAAAGGT------------CGCAAATGGGCTATCGATCTG---TCCGATTCTTCACTCCAGTCTTCT---------------------------CGCGATGTCCCTGACCCCCCCGGATTCGCGCGATCGGCTCTGGACCTGGATGAG---GGTTCAACTGGTCGACAAAAAAAAGAAACCGACTTAGCTTGGAAACAGCAGAAAGCATGGGAGGTAGCGCAAGCACCTTTCAAAAATCTGTTCATGATGGGA------------------------------TTTATGATGTGGATGGCTGGGAACACTGTACACCTGTTCAGTATTGGGATTACTTTCTCAGCACTTTGGCAACCTATAAGTGCCCTTCAGGGCCTGAGCAAATTTTTTGAACCATATCAGGATGCACGGATAGACATTATGCTTCCAAAGCTTGTTTATGTGCTTCTTAACATAGCAGGTCTCTTGTTGGGTCTCTGGAAGCTGAATTCACTTGGACTTCTTCCAACACATGCATCAGATTGGGTGTCTTCTCTTCCTCCACCTCCAATGGTGGAATATTCTGGTGGTGGCATTCCTTATAATTGA Vittaria_lineata_SKYV ATGGAGAAGGGC---------AAAGCAGGCCCT------CGCAAATGGGCTATCGATTTT---TCTGAGACTAGTTCTGCC---------------------------------CGTGATGTGCCCGACCCACCTGGCTTCTCAAGA---TCTTTGGATCTGGATGAG---GTCGCAGCCGGTCGTCAAAAGGAGAAGACAGATATTCCATGGAAGCAGCAAAAAGCATGGGAGGTAGCACAAGCTCCCTTCAAGAACTTGCTGATGATGGGC------------------------------TTCATGATGTGGATGGCTGGAAATACCGTGCATTTGTTCAGTATTGGAATCACCGTATCAGCATTGTGGCAACCTATCAGTGCTCTTCAAAGTGTTGGCAAAGTGTTTGAGCCATTTCAGGATGCTCGAACCGACACATTGCTTCCAAAGATTGTCTATATCTGTTTGAATATTGCTGGCCTATTCTTGGGGCTGTGGAAGCTGAACACACTAGGTCTACTTCCGACTCATGCATCGGATTGGGTTTCTTCTCTGCCACCACCACCTATGGCTGAATTCTCTGGTGGGGGTGTTCCATTCAAGTGA Woodsia_ilvensis_YQEC ATGGAGAAGGGT---GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGACATCTTCCTCCTCCTCTTCTTCT---------------------CGAGAAGTGCCTGACCCTCCCGGCTTCTCCCGATCTTCCTCGGATCTGGATGAG---GCTGCAACTGGTCGGCAAAAGAAGGAGGCAGATAACTCATGGAAGCAACAAAAAGCATGGGAAATTGCGCAAGCGCCTTTCAAAAACCTGTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATCGGGATCACAGTCTCAGCTTTATGGCAACCCATCAGCGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCCCGAACAGACACCCTACTTCCTAAGGTCGTTTTCATATGTCTGAATGTTGCTGGCTTATTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCGACACATGCATCTGATTGGGTGTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCTGGAGGGGGGGTTCCATTCAAGTGA Woodsia_scopulina_YJJY ATG------------GCAGCGAAAGGGGCCACC------CGCAAGTGGGCGATCGACTTC---TCTGAGACTTCTTCTTCATCCTCTTCTTCT---------------------CGAGACGTGCCTGACCCCCCCGGCTTCTCCCGATCGTCTTCGGATCTGGATGAG---GCTGCAGCAGGTCGGCAAAAGAAGGAGGCAGATACCTCATGGAAGCAACAAAAAGCATGGGAAATTGCTCAAGCGCCTTTCAAAAATCTCTTTATGATGGGC------------------------------TTCATGATGTGGATGGCTGGCAGCACTGTTCACTTGTTCAGCATTGGGATCACAATCTCAGCTTTGTGGCAACCCATTAGCGCACTCCAAAGTGTGGGCAAAGTGTTTGAGCCTTTTCAGGATGCTCGAACAGACACCCTACTTCCTAAGCTCGTTTTCATATGTCTGAATGTTGCTGGCTTACTTCTAGGGCTTTGGAAGCTCAACACCCTTGGTCTTCTTCCTACACATGCATCTGATTGGGTTTCCTCACTTCCGCCGCCAGCAATGGTTGAATTTTCTGGAGGGGGGTTCCCTTTCAAGTGA ; END; BEGIN TREES; Title DUF1077; LINK Taxa = Taxa; TRANSLATE 1 Adiantum_aleuticum_WCLG, 2 Adiantum_raddianum_BMJR, 3 Alsophila_spinulosa_GANB, 4 Amborella_trichopoda_scaffold00019.47_, 5 Anemia_tomentosa_CQPW, 6 Angiopteris_evecta_NHCM, 7 Aquilegia_coerula_Aquca_00330.1, 8 Arabidopsis_thaliana_AT5G10780_similar, 9 Argyrochosma_nivea_XDDT, 10 Asplenium_nidus_PSKY, 11 Asplenium_platyneuron_KJZG, 12 Athyrium_filixfemina_URCP, 13 Athyrium_sp_AFPO, 14 Azolla_caroliniana_cf_CVEG, 15 Blechnum_spicant_VITX, 16 Bolbitis_repanda_JBLI, 17 Botrypus_virginianus_BEGM, 18 Cedrus_libani_GGEA, 19 Crepidomanes_venosum_TWFZ, 20 Cryptogramma_acrostichoides_WQML, 21 Cryptomeria_japonica_DSXO, 22 Culcita_macrocarpa_PNZO, 23 Cystopteris_fragilis_LHLE, 24 Cystopteris_protrusa_YOWV, 25 Cystopteris_reevesiana_RICC, 26 Cystopteris_sp_XXHP, 27 Cystopteris_utahensis_HNDZ, 28 Davallia_fejeensis_OQWW, 29 Dennstaedtia_davallioides_MTGC, 30 Deparia_lobatocrenata_FCHS, 31 Didymochlaena_truncatula_RFRB, 32 Diplazium_wichurae_UFJN, 33 Dipteris_conjugata_MEKP, 34 Encephalartos_barteri_GNQG, 35 Ephedra_sinica_VDAO, 36 Equisetum_diffusum_CAPN, 37 Equisetum_hyemale_JVSZ, 38 Gaga_arizonica_DCDT, 39 Ginkgo_biloba_SGTW, 40 Gymnocarpium_dryopteris_HEGQ, 41 Homalosorus_pycnocarpos_OCZL, 42 Hymenophyllum_bivalve_QIAD, 43 Hymenophyllum_cupressiforme_TRPJ, 44 Illicium_parviflorum_ROAP, 45 Leucostegia_immersa_WGTU, 46 Lindsaea_linearis_NOKI, 47 Lindsaea_microphylla_YIXP, 48 Lygodium_japonicum_PBUU, 49 Myriopteris_rufa_GSXD, 50 Nephrolepis_exaltata_NWWI, 51 Notholaena_montieliae_YCKE, 52 Nuphar_advena_WTKZ, 53 Onoclea_sensibilis_HTFH, 54 Ophioglossum_petiolatum_WTJG, 55 Ophioglossum_sp_QHVS, 56 Osmunda_javanica_VIBO, 57 Osmunda_sp_UOMY, 58 Parahemionitis_cordata_ZXJO, 59 Peperomia_fraseri_XSZI, 60 Phlebodium_pseudoaureum_ZQYU, 61 Phymatosorus_grossus_ORJE, 62 Pilularia_globulifera_KIIX, 63 Pityrogramma_trifoliata_UJTT, 64 Plagiogyria_japonica_UWOD, 65 Pleopeltis_polypodioides_UJWU, 66 Polypodium_amorphum_YLJA, 67 Polypodium_glycyrrhiza_CJNT, 68 Polypodium_hesperium_B_IXLH, 69 Polypodium_hesperium_GYFU, 70 Polystichum_acrostichoides_FQGQ, 71 Psilotum_nudum_QVMR, 72 Pteridium_aquilinum_Contig3731, 73 Pteris_ensiformis_FLTD, 74 Pteris_vittata_POPJ, 75 Sceptridium_dissectum_EEAQ, 76 Sticherus_lobatus_XDVM, 77 Thelypteris_acuminata_MROH, 78 Thyrsopteris_elegans_EWXK, 79 Tmesipteris_parva_ALVQ, 80 Vittaria_lineata_SKYV, 81 Woodsia_ilvensis_YQEC, 82 Woodsia_scopulina_YJJY; TREE DUF1077_bestREP2 = (47:0.01161294,46:1.0E-8,((((32:0.0277414,((((((28:0.0600384,(61:0.03093873,(((69:0.00375434,((67:0.00189226,68:0.00184506):0.00569851,66:0.00562562):1.0E-8):0.00226085,65:0.02291418):0.00403262,60:0.02165778):0.00823421):0.02377807):0.02128676,(16:0.04294014,70:0.02621981):0.00328045):0.00208816,(45:0.04363056,(31:0.02370753,50:0.05688753):1.0E-8):0.00638745):0.0134231,(15:0.02454235,((11:0.03526968,10:0.03224664):0.05598041,81:0.02859335):0.00203223):0.00141705):1.0E-8,((27:0.00997601,((25:0.00196881,23:0.00392378):0.0018956,(24:1.0E-8,26:1.0E-8):1.0E-8):0.00578797):0.00803336,40:0.00941014):0.00762064):0.0018624,((((41:0.02784642,(13:0.01160924,12:0.00388536):0.00352904):0.00213485,82:0.02639585):1.0E-8,53:0.00947758):0.00182679,77:0.02339799):1.0E-8):1.0E-8):0.00361224,30:0.01583756):0.03134761,((72:0.04656687,29:0.03437729):0.02385532,((((2:0.11298792,(1:0.04119625,80:0.14909366):0.00109069):0.02690306,(((58:0.03919579,(9:0.0284031,38:0.03545989):0.0027132):0.00340123,49:0.02434316):0.00776521,51:0.04477664):0.02144791):0.02229595,((74:0.025296,73:0.04232765):0.01202708,63:0.09187975):0.03992425):0.00609616,20:0.0342211):0.06052543):0.01062592):0.0390438,(3:0.02665694,(((14:0.3232182,62:0.22164866):0.10249811,(64:0.0281546,22:0.00960092):0.02024705):0.00407778,((((19:0.07267428,(42:0.00869375,43:0.01247479):0.0357851):0.03960406,(((56:0.00855166,57:0.0232538):0.07626572,((37:0.01339049,36:0.05651874):0.38497578,(6:0.22275533,(((34:0.21018078,((21:0.15003914,18:0.10337465):0.0610933,39:0.10351689):0.04829597):0.09180353,((4:0.24602966,((59:0.30072824,((8:0.32233193,7:0.23767339):0.05784642,44:0.12526952):0.03486317):0.05561351,52:0.19559481):0.02507023):0.15964143,35:0.43331946):0.03475779):0.29868063,((71:0.02574137,79:0.01863063):0.10601469,((75:0.01929079,17:0.01592951):0.03765089,(54:1.0E-8,55:0.00315382):0.20627224):0.0384002):0.06607464):0.0177811):0.03921019):0.04762527):0.05940349,76:0.05664589):0.01484818):0.00682638,((48:0.12911644,5:0.16526713):0.07853399,33:0.06903781):0.01811084):0.11612089,78:0.01508143):0.01017419):0.01401767):0.05238968):0.21462662); END; begin sets; charset exclude = 13 - 21 34 - 39 61 - 63 85 - 114 169 - 171 274 - 303 607 - 609; charset codonPos1 = 1 - 607 \ 3; charset codonPos2 = 2 - 608 \ 3; charset codonPos3 = 3 - 609 \ 3; end; begin mrbayes; set autoclose = no nowarn = yes; exclude 13 - 21 34 - 39 61 - 63 85 - 114 169 - 171 274 - 303 607 - 609; charset codonPos1 = 1 - 607 \ 3; charset codonPos2 = 2 - 608 \ 3; charset codonPos3 = 3 - 609 \ 3; partition currentPartition = 3 : codonPos1 , codonPos2 , codonPos3; set partition = currentPartition; lset applyto = ( 1 , 2 , 3 ); lset nst = 6 rates = invgamma; unlink statefreq = ( all ) revmat = ( all ) shape = ( all ) pinvar = ( all ); prset applyto = ( all ) ratepr = variable; mcmcp ngen = 10000000 relburnin = yes burninfrac = 0.25 printfreq = 1000 samplefreq = 1000 nchains = 4 savebrlens = yes; mcmc; sumt; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 609; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 609; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 609; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1430009488690; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 9137359171992002662; tell It; setDefaultOrder 59 52 67 32 70 43 33 34 61 18 11 1 0 64 23 10 35 40 75 60 38 72 12 28 20 25 7 16 69 3 19 21 68 41 47 37 42 53 46 6 15 73 74 45 24 80 81 71 54 14 62 49 8 48 44 78 76 63 50 30 17 65 57 77 22 27 2 9 5 4 36 51 55 56 39 79 13 66 31 58 29 26; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3490389769162567633; checksumv 0 2 990549684 null getNumChars 609 numChars 609 getNumTaxa 82 numTaxa 82 short true bits 15 states 15 sumSquaresStatesOnly 955042.0 sumSquares 955042.0 NumFiles 1 NumMatrices 1; endTell; getWindow; tell It; suppress; setResourcesState false false 100; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1280 716; setLocation 0 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #9137359171992002662 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 1679.1430009437067.4895154495966747388; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1180 649; setLocation 0 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.reroot; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareTree.SquareTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle on; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; endTell; setEdgeWidth 6; orientUp; setCornerMode Right_Angle 50; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(((34:0.21018078,((21:0.15003914,18:0.10337465):0.0610933,39:0.10351689):0.04829597):0.09180353,((4:0.24602966,((59:0.30072824,((8:0.32233193,7:0.23767339):0.05784642,44:0.12526952):0.03486317):0.05561351,52:0.19559481):0.02507023):0.15964143,35:0.43331946):0.03475779):0.149340315,(((71:0.02574137,79:0.01863063):0.10601469,((75:0.01929079,17:0.01592951):0.03765089,(54:1.0E-8,55:0.00315382):0.20627224):0.0384002):0.06607464,(6:0.22275533,((37:0.01339049,36:0.05651874):0.38497578,((56:0.00855166,57:0.0232538):0.07626572,(76:0.05664589,((19:0.07267428,(42:0.00869375,43:0.01247479):0.0357851):0.03960406,(((48:0.12911644,5:0.16526713):0.07853399,33:0.06903781):0.01811084,(78:0.01508143,(((14:0.3232182,62:0.22164866):0.10249811,(64:0.0281546,22:0.00960092):0.02024705):0.00407778,(3:0.02665694,((((32:0.0277414,((((((28:0.0600384,(61:0.03093873,(((69:0.00375434,((67:0.00189226,68:0.00184506):0.00569851,66:0.00562562):1.0E-8):0.00226085,65:0.02291418):0.00403262,60:0.02165778):0.00823421):0.02377807):0.02128676,(16:0.04294014,70:0.02621981):0.00328045):0.00208816,(45:0.04363056,(31:0.02370753,50:0.05688753):1.0E-8):0.00638745):0.0134231,(15:0.02454235,((11:0.03526968,10:0.03224664):0.05598041,81:0.02859335):0.00203223):0.00141705):1.0E-8,((27:0.00997601,((25:0.00196881,23:0.00392378):0.0018956,(24:1.0E-8,26:1.0E-8):1.0E-8):0.00578797):0.00803336,40:0.00941014):0.00762064):0.0018624,((((41:0.02784642,(13:0.01160924,12:0.00388536):0.00352904):0.00213485,82:0.02639585):1.0E-8,53:0.00947758):0.00182679,77:0.02339799):1.0E-8):1.0E-8):0.00361224,30:0.01583756):0.03134761,((72:0.04656687,29:0.03437729):0.02385532,((((2:0.11298792,(1:0.04119625,80:0.14909366):0.00109069):0.02690306,(((58:0.03919579,(9:0.0284031,38:0.03545989):0.0027132):0.00340123,49:0.02434316):0.00776521,51:0.04477664):0.02144791):0.02229595,((74:0.025296,73:0.04232765):0.01202708,63:0.09187975):0.03992425):0.00609616,20:0.0342211):0.06052543):0.01062592):0.0390438,(47:0.01161294,46:1.0E-8):0.21462662):0.05238968):0.01401767):0.01017419):0.11612089):0.00682638):0.01484818):0.05940349):0.04762527):0.03921019):0.0177811):0.149340315);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #3490389769162567633 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1180 649; setLocation 0 22; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.SortTaxa.SortTaxa.taxaSort; endTell; setTool mesquite.charMatrices.SortTaxa.SortTaxa.taxaSort; colorCells #mesquite.charMatrices.ColorByState.ColorByState; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;