#NEXUS

BEGIN TAXA;
	DIMENSIONS NTAX=26;
	TAXLABELS
		Infectious_bronchitis_virus_H120 Infectious_bronchitis_virus_M41 Infectious_bronchitis_virus_Ma5 'Infectious bronchitis virus 4_91' Infectious_bronchitis_virus_Italy02 Infectious_bronchitis_virus_QX 'Infectious bronchitis virus IBV-CU2-SP1' 'Infectious bronchitis virus EG_12120s_2012' 'Infectious bronchitis virus Eg_1265B_2012' 'Infectious bronchitis virus Eg_CLEVB-2_IBV_012' 'Infectious bronchitis virus Mans-1' 'Infectious bronchitis virus Egypt_D_89' 'Infectious bronchitis virus Moroccan-G_83' 'Infectious bronchitis virus IBV_morocco_30' 'Infectious bronchitis virus IBV_morocco_38' 'Infectious bronchitis virus IBV_Morocco_01' 'Infectious bronchitis virus Algeria_26_b3' 'Infectious bronchitis virus Algeria_26_b2' 'Infectious bronchitis virus Algeria_26_b1' 'Infectious bronchitis virus Tunisia_TN296_07' 'Infectious bronchitis virus Tunisia_TN556_07' 'Infectious bronchitis virus TN335_01' 'Infectious bronchitis virus TN200_01' 'Infectious bronchitis virus TN200_00' 'Infectious bronchitis virus NGA_293_2006' 'Infectious bronchitis virus NGA_A116E7_2006' 
	;
END;

BEGIN CHARACTERS;
	DIMENSIONS  NCHAR=3601;
	FORMAT DATATYPE = DNA GAP = - MISSING = ?;
	MATRIX
	Infectious_bronchitis_virus_H120                ATGTTGGAGAGGTCACTGTTATTAGCGACTCTTTTGTCTGCACTATGTAGTGCCAATTTGTTTGGTAATAATTCTTACGTGTACTACTACCAAAGTGCCTTCAGACCACCTGATGGTTGGCATTTACATGGTGGTGCTTATGAAGTAGTAAATGTTTCTACGGAATCTAGTAATGCAGGCACGACTGGGTGTACTGCCGGTGCTATTTATTGGAGTAAGAATTTCAGTGCTGCTTCCGTGGCTATGACAGCACCTCAAAATGGTATGTCATGGTCTACTGAGCAATTTTGTACGGCTCACTGCAATTTTACTGATTTTGTAGTATTTGTTACACATTGCTATAAAAAGGGTCCTGGTTCATGTCCTTTAACAGGTCTGATTCCACAGTATCATATTCGTATTTCTGCTATGAAAAATAGCAGTTTGTTTTATAACTTAACAGTTGCTGTGACTAAATATCCTAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACATCTGTATACCTAAATGGCGATCTCGTTTTTACTTCTAACGAGACTAAAGATGTTAGTGCTGCAGGTGTTCATTTTAAAGCTGGTGGCCCTATAACTTATAAAGTTATGCGGGAAGTTAAAGCATTGGCTTATTTTGTTAATGGCACCGCACAAGATGTGATTCTTTGTGACGGTTCACCTACAGGTTTACTAGCATGTCAGTATAATACTGGTAATTTTTCAGATGGCTTTTATCCTTTTACTAATAGTAGTTTAGTTAAGGAAAAGTTTATTGTTTATCGTGAAAGTAGTGTTAACACTACTTTGGAGTTAACTAATTTCACTTTTTCTAATGTAAGTAATGCTACCCCTAACACAGGGGGTGTCCAGACCATACAATTATATCAAACCAGCACAGCTCAGAGTGGTTATTATAATCTTAATTTCTCCTTTCTGAGTAGTTTTATCTATAAGGCTTCTGATTATATGTATGGGTCTTACCACCCAAGTTGTAAGTTTAAACTAGAAACTATTAATAATGGTTTGTGGTTTAACTCACTTTCCGTCTCTCTTGGTTACGGACCTATTCAAGGTGGTTGTAAGCAATCTGTGTTTGCAAATAGGGCAACTTGTTGTTACGCCTACTCGTACAATGGACCTTCCCTTTGTAAAGGTGTTTATAGAGGTGAGTTAACAAAAAGCTTTGAATGTGGATTGCTGGTTTTTGTGACTAAGACTGATGGTTCCCGTATACAAACTAGAAATGAACCATTTACGTTAACCCAGCACAATTATAATAATATTACTTTAGATAGATGTGTTGAGTATAATATATATGGTAGAGTTGGACAAGGTTTTATTACTAATGTAACTAACTATGCCATTAATTATAATTATCTAGCTGATGGTGGTATGGCTATTTTAGATACATCTGGCGCCATAGACATCTTCGTTGTACAAGGTGAATATGGTCTTAATTATTACAAGGTCAACCCTTGTGAGGATGTTAATCAGCAGTTTGTAGTTTCTGGTGGTAAATTAGTAGGTATTCTTACGTCACGTAATGAGACTGGCTCGCAGCCTCTTGAAAACCAGTTCTATATTAAAATCATTAATGGAACTCGTCGTTCTAGACGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Infectious_bronchitis_virus_M41                 ACGCCAGTTGTTAATTTGAAAACTGAACAAAAGACAGACTTAGTCTTTAATTTAATTAAGTGTGGTAAGTTACTGGTAAGAGATGTTGGTAACACCTCTTTTACTAGTGACTCTTTTGTGTGTACTATGTAGTGCTGCTTTGTATGACAGTAGTTCTTACGTTTACTACTACCAAAGTGCCTTTAGACCACCTAATGGTTGGCATTTACACGGGGGTGCTTATGCGGTAGTTAATATTTCTAGCGAATCTAATAATGCAGGCTCTTCACCTGGGTGTATTGTTGGTACTATTCATGGTGGTCGTGTTGTTAATGCTTCTTCTATAGCTATGACGGCACCGTCATCAGGTATGGCTTGGTCTAGCAGTCAGTTTTGTACTGCACACTGTAACTTTTCAGATACTACAGTGTTTGTTACACATTGTTATAAATATGATGGGTGTCCTATAACTGGCATGCTTCAAAAGAATTTTTTACGTGTTTCTGCTATGAAAAATGGCCAGCTTTTCTATAATTTAACAGTTAGTGTAGCTAAGTACCCTACTTTTAAATCATTTCAGTGTGTTAATAATTTAACATCCGTATATTTAAATGGTGATCTTGTTTACACCTCTAATGAGACCACAGATGTTACATCTGCAGGTGTTTATTTTAAAGCTGGTGGACCTATAACTTATAAAGTTATGAGAAAAGTTAAAGCCCTGGCTTATTTTGTTAATGGTACTGCACAAGATGTTATTTTGTGTGATGGATCACCTAGAGGCTTGTTAGCATGCCAGTATAATACTGGCAATTTTTCAGATGGCTTTTATCCTTTTATTAATAGTAGTTTAGTTAAGCAGAAGTTTATTGTCTATCGTGAAAATAGTGTTAATACTACTTTTACGTTACACAATTTCACTTTTCATAATGAGACTGGCGCCAACCCTAATCCTAGTGGTGTTCAGAATATTCTAACTTACCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTTTCCTTTCTGAGTAGTTTTGTTTATAAGGAGTCTAATTTTATGTATGGATCTTATCACCCAAGTTGTAATTTTAGACTAGAAACTATTAATAATGGCTTGTGGTTTAATTCACTTTCAGTTTCAATTGCTTACGGTCCTCTTCAAGGTGGTTGCAAGCAATCTGTCTTTAGTGGTAGAGCAACTTGTTGTTATGCTTATTCATATGGAGGTCCTTCGCTGTGTAAAGGTGTTTATTCAGGTGAGTTAGATCTTAATTTTGAATGTGGACTGTTAGTTTATGTTACTAAGAGCGGTGGCTCTCGTATACAAACAGCCACTGAACCGCCAGTTATAACTCGACACAATTATAATAATATTACTTTAAATACTTGTGTTGATTATAATATATATGGCAGAACTGGCCAAGGTTTTATTACTAATGTAACCGACTCAGCTGTTAGTTATAATTATCTAGCAGACGCAGGTTTGGCTATTTTAGATACATCTGGTTCCATAGACATCTTTGTTGTACAAGGTGAATATGGTCTTACTTATTATAAGGTTAACCCTTGCGAAGATGTCAACCAGCAGTTTGTAGTTTCTGGTGGTAAATTAGTAGGTATTCTTACTTCACGTAATGAGACTGGTTCTCAGCTTCTTGAGAACCAGTTTTACATTAAAATCACTAATGGAACACGTCGTTTTAGACGTTCTATTACTGAAAATGTTGCAAATTGCCCTTATGTTAGTTATGGTAAGTTTTGTATAAAACCTGATGGTTCAATTGCCACAATAGTACCAAAACAATTGGAACAGTTTGTGGCACCTTTACTTAATGTTACTGAAAATGTGCTCATACCTAACAGTTTTAATTTAACTGTTACAGATGAGTACATACAAACGCGTATGGATAAGGTCCAAATTAATTGTCTGCAGTATGTTTGTGGCAATTCTCTGGATTGTAGAGATTTGTTTCAACAATATGGGCCTGTTTGTGACAACATATTGTCTGTAGTAAATAGTATTGGTCAAAAAGAAGATATGGAACTTTTGAATTTCTATTCTTCTACTAAACCGGCTGGTTTTAATACACCATTTCTTAGTAATGTTAGCACTGGTGAGTTTAATATTTCTCTTCTGTTAACAACTCCTAGTAGTCCTAGAAGGCGTTCTTTTATTGAAGACCTTCTATTTACAAGCGTTGAATCTGTTGGATTACCAACAGATGACGCATACAAAAATTGCACTGCAGGACCTTTAGGTTTTCTTAAGGACCTTGCGTGTGCTCGTGAATATAATGGTTTGCTTGTGTTGCCTCCCATTATAACAGCAGAAATGCAAACTTTGTATACTAGTTCTCTAGTAGCTTCTATGGCTTTTGGTGGTATTACTGCAGCTGGTGCTATACCTTTTGCCACACAACTGCAGGCTAGAATTAATCACTTGGGTATTACCCAGTCACTTTTGTTGAAGAATCAAGAAAAAATTGCTGCTTCCTTTAATAAGGCCATTGGTCGTATGCAGGAAGGTTTTAGAAGTACATCTCTAGCATTACAACAAATTCAAGATGTTGTTAATAAGCAGAGTGCTATTCTTACTGAGACTATGGCATCACTTAATAAAAATTTTGGTGCTATTTCTTCTGTGATTCAAGAAATCTACCAGCAACTTGACGCCATACAAGCAAATGCTCAAGTGGATCGTCTTATAACTGGTAGATTGTCATCACTTTCTGTTTTAGCATCTGCTAAGCAGGCGGAGCATATTAGAGTGTCACAACAGCGTGAGTTAGCTACTCAGAAAATTAATGAGTGTGTTAAGTCACAGTCTATTAGGTACTCCTTTTGTGGTAATGGACGACATGTTCTAACCATACCGCAAAATGCACCTAATGGTATAGTGTTTATACACTTTTCTTATACTCCAGATAGTTTTGTTAATGTTACTGCAATAGTGGGTTTTTGTGTAAAGCCAGCTAATGCTAGTCAGTATGCAATAGTACCCGCTAATGGTAGGGGTATTTTTATACAAGTTAATGGTAGTTACTACATCACAGCACGAGATATGTATATGCCAAGAGCTATTACTGCAGGAGATATAGTTACGCTTACTTCTTGTCAAGCAAATTATGTAAGTGTAAATAAGACCGTCATTACTACATTCGTAGACAATGATGATTTTGATTTTAATGACGAATTGTCAAAATGGTGGAATGACACTAAGCATGAGCTACCAGACTTTGACAAATTCAATTACACAGTACCTATACTTGACATTGATAGTGAAATTGATCGTATTCAAGGCGTTATACAGGGTCTTAATGACTCTTTAATAGACCTTGAAAAACTTTCAATACTCAAAACTTATATTAAGTGGCCTTGGTATGTGTGGTTAGCCATAGCTTTTGCCACTATTATCTTCATCTTAATACTAGGATGGGTTTTCTTCATGACTGGATGTTGTGGTTGTTGTTGTGGATGCTTTGGCATTATGCCTCTAATGAGTAAGTGTGGTAAGAAATCTTCTTATTACACGACTTTTGATAACGATGTGGTAACTGAACAAAACAGACCTAAAAAGTCTGTTTAATGATTCAAAGTCCCACGTCCTTCCTAATA-
	Infectious_bronchitis_virus_Ma5                 ATGTTGGTAACACCTCTTTTACTAGTGACTCTTTTGTGTGCACTATGTAGTGCTGCTTTGTATGACAGTAGTTCTTACGTGTACTACTACCAAAGTGCCTTCAGACCACCTGATGGTTGGCATTTACATGGGGGTGCGTATGCGGTTGTTAATATTTCTAGTGAATCTAATAATGCAGGCTCTTCATCTGGGTGTACTGTTGGTATTATTCATGGTGGTCGTGTTGTTAATGCTTCTTCTATAGCTATGACGGCACCGTCATCAGGTATGGCTTGGTCTAGCAGTCAGTTTTGTACTGCATACTGTAACTTTTCAGATACTACAGTGTTTGTTACACATTGTTATAAACATGGTGGGTGTCCTATAACTGGCATGCTTCAACAGCATTCTATACGTGTTTCTGCTATGAAAAATGGCCAGCTTTTCTATAATTTAACAGTTAGTGTAGCTAAGTACCCTACTTTTAAATCATTTCAGTGTGTTAATAATTTAACATCCGTATATTTAAATGGTGATCTTGTTTACACCTCTAATGCGACCACAGATGTTACATCTGCAGGTGTTTATTTTAAAGCTGGTGGACCTATAACTTATAAAGTTATGAGAGAAGTTAGAGCCCTGGCTTATTTTGTTAATGGTACTGCACAAGATGTTATTTTGTGTGATGGGTCACCTAGAGGCTTGTTAGCATGCCAGTATAATACTGGCAATTTTTCAGATGGCTTTTATCCTTTTACTAATAGTAGTTTAGTTAAGCAGAAGTTTATTGTCTATCGTGAAAATAGTGTTAATACTACTTTTACGTTACACAATTTCACTTTTCATAATGAGACTGGCGCCAACCCAAATCCTAGTGGTGTCCAGAATATTCAAACTTACCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTTTCCTTTCTGAGTAGTTTTGTTTATAAGGAGTCTAATTTTATGTATGGATCTTATCACCCAAGTTGTAATTTTAGACTAGAAACTATTAATAATGGTTTGTGGTTTAATTCACTTTCAGTTTCAATTGCTTACGGTCCTCTTCAAGGTGGTTGCAAGCAATCTGTCTTTAGTGGTAGAGCAACCTGTTGTTATGCTTACTCATATGGAGGTCCTTTGCTGTGTAAAGGTGTTTATTCAGGTGAGTTAGATCATAATTTTGAATGTGGACTGTTAGTTTATGTTACTAAGAGCGGTGGCTCTCGTATACAAACAGCCACTGAACCGCCAGTTATAACTCAACACAATTATAATAATATTACTTTAAATACTTGTGTTGATTATAATATATATGGCAGAACTGGCCAAGGTTTTATTACTAATGTAACCGACTCAGCTGTTAGTTATAATTATCTAGCAGACGCAGGTTTGGCTATTTTAGATACATCTGGTTCCATAGACATCTTTGTCGTACAAAGTGAATATGGTCTTAATTATTATAAGGTTAACCCTTGCGAAGATGTCAACCAGCAGTTTGTAGTTTCTGGTGGTAAATTAGTAGGTATTCTTACTTCACGTAATGAGACTGGTTCCCAGCTTCTTGAGAATCAGTTTTACATCAAAATCACTAATGGAACACGTCGTTTTAGACG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus 4_91'              ATGTTGGGCAAACCGCTTTTACTAGTGACTCTTTGGTATGCACTATGTAGTGCTTTGCTTTATGATAAAAATACTTACGTTTACTACTACCAAAGTGCCTTTAGGCCTGGTCAAGGTTGGCATCTACATGGGGGTGCTTATGCAGTAGATAAGGTTTTTAATGGAACCAACAATGCAGTCAGTGTATCTGATTGCACTGCTGGTACTTTTTATGAAAGCTATAATATTTCTGCTGCTTCTGTAGCCATGACAGTACCACCTGCTGGTATGTCTTGGTCAGTTTCACAGTTTTGTACAGCTCATTGTAACTTCTCAGACTTTACAGTGTTTGTTACGCATTGTTTTAAAAGTCAACAAGGTAGTTGTCCATTGACAGGTATGATTCCTCAGAATCATATTCGTATTTCTGCTATGAGATCTGGATTTTTGTTTTATAATTTAACAGTTAGCGTATCTAAATACCCTAAATTTAAATCGCTTCAATGTGTTGGCAATTCTACATCTGTCTATTTAAATGGTGATCTTGTTTTCACTTCTAATGAAACAACTCACGTTACGGGTGCAGGCGTTTATTTTAAAAGTGGTGGGCCTGTAACTTATAAAGTTATGAAAGAAGTTAAAGCCCTAGCCTACTTTATTAATGGTACCGCACAAGAGGTTATTTTATGTGATAACTCACCTAGAGGTTTGCTTGCATGTCAGTATAACACTGGTAATTTTTCAGATGGATTCTACCCTTTTACTAATTCTTCTTTAGTTAAGGATAGGTTTATTGTATATCGAGAAAGTAGCACTAACACTACTTTAGAGTTAACTAATTTCACTTTTACTAATGTAAGTAATGCTTCTCCTAATTCAGGTGGCGTTGATACTTTCCAATTATATCAAACACATACTGCTCAGGATGGTTATTATAATTTTAATTTATCATTTCTGAGTAGTTTTGTGTATAAACCATCTGATTTTATGTATGGGTCATACCACCCAAATTGTAATTTTAGACCAGAGAATATTAATAATGGCTTATGGTTTAATTCATTATCTGTGTCACTTACTTACGGACCCATTCAAGGTGGTTGTAAGCAATCTGTTTTTAGTAATAAAGCAACTTGTTGCTATGCTTATTCTTACCGAGGTCCTACTAGATGTAAGGGTGTTTATAGAGGGGAGCTAACGCAATACTTTGAATGTGGACTTCTAGTTTATGTAACTAAGAGTGATGGCTCTCGTATACAAACTAGAAGTGAACCACTGGTGTTAACTCAATATAATTATAACAACATTACTTTAAATAAGTGTGTTGAGTATAATATATATGGTAGAGTTGGTCAAGGTTTTATTACTAATGTAACTGAAGCAACTGCTAATTATAGTTATCTAGCAGATGGTGGTTTAGCTATTTTAGATACTTCAGGAGCCATAGACATATTTGTTGTTCGAGGTGCATATGGTCTTAATTATTATAAGGTTAATCCCTGTGAAGATGTTAACCAACAGTTTGTAGTGTCTGGTGGCAATTTAGTTGGCATTCTTACATCTCATAATGAAACAGATTCTGAATTTATTGAGAACCAGTTTTACATCAAACTCACTAACGGAACACGTCGCTCTAGACGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Infectious_bronchitis_virus_Italy02             ATGTTGGGCAAACCGCTTTTACTAGTGACTCTTTTGTTTGCACTATGTAATGCCCTTTTATATGATAATGGTACTTACGTTTACTACTACCAGAGTGCCTTCAGACCACCTTTTGGTTGGCATGTTCATGGAGGCGCGTATGCAGTAGTTAATGTAAGTACGGAGTATGCTAATGCGCACGGAACCAGCTGCACTGCTGGTACTATCTCTTGGAGTAAGAATTTTACTGCTGCTTCTGTAGCCATGACAGCACCTACTTCTGGTATGGCATGGTCTACTGCCCAATTCTGTACTGCACACTGTAATTTTACCGATTTTACAGTGTTCGTTACACATTGTTTTAAAAGTGGAACTGGTAAATGTCCCTTAACAGGTCTTATTCCAAATGGTCATATTCGTATTTCTGCTATGAAAGAAGGAAGTAACTCCTTGTTTTATAACTTAACAATTTCTGTGACTAAATATCCTAGATTTAAGTCGCTGCAATGTGTTAACAATTTTACAGCTGTATACCTAAATGGTGATCTTGTTTTTACTTCTAACGAGACTAAAGATGTTAGTGGTGCAGGTGTTTATTTTAAAGCTGGCGGTCCCATAACCTACAAAGTTATGAGAGAAGTTAAAGCTTTGGCTTATTTTGTTAATGGTACTGCACAAGATGTTATTTTGTGTGATAAGTCACCTAGAGGCTTATTAGCCTGCCAATATAATACAGGCAATTTTTCAGATGGATTTTACCCTTTTACTAATGCTAGTTTAGTTAAGGACAGGTTTGTTGTATATCGCGAAAGTAGTGTTAATACCACTCTGGAATTAACTAACTTCACGTTTTCAAACGAAAGTAATGCTCCACCCAATAGTGGTGGTGTTAATACTTTTGTACTATACCAAACACATACTGCTCAGAGTGGTTATTACAATTTTAATTTATCATTTCTGAGTAGTTTTGTGTATAAACCATCCGATTTTATGTATGGGTCATACCACCCAAAGTGTAATTTTAGACCAGAGAATATTAATAATGGCTTATGGTTTAATTCCTTATCTGTGTCGCTTACTTACGGACCCATTCAAGGTGGTTGTAAGCAATCTGTTTTTAGTAATAGAGCAACTTGTTGTTATGCCTACTCTTATAGAGGTCCTACTAAGTGTAAGGGTGTTTATACAGGGGAGTTTAGTAGAGACTTTGAATGTGGACTTCTAGTTTATATAACTAAGAGTGATGGCTCTCGTGTACAAACTAGAAGTGAACCACTGGTGTTAACTCAATATAATTATAACAACATTACTTTAAATAAGTGTGTTGAGTATAATATATATGGTAGATTTGGTCAAGGTTTTATTACTAATGTAACTGATGCAGCTGCTAATTATGAGTATTTCGCAGATGGTGGCTTAGCTATTTTAGATACGTCGGGAGCCATAGACACATTTGTTGTTCAAGGTTCGCATGGTCTTAATTATTATAAGGTTAATCCCTGTGAAGATGTTAACCAACAGTTTGTAGTGTCTGGTCGCAACATAGTATGCATTCTTACCTCTCGTAATGAAACAGATTCTGAATTTATTGAGAACCAGTTTTATATTAAACTCACTAACGGAACACACCGCTTCAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	Infectious_bronchitis_virus_QX                  ATGTTGGGGAAGTCACTGTTTTTAGTGACCATTTTGTGTGCACTATGTAGTGCAAATTTGTTCGATTCTGCTAATAATTATGTGTACTACTACCAAAGTGCCTTTAGGCCTCCAAATGGATGGCATTTGCAAGGGGGTGCTTATGCAGTAGTGAATTCCACTAATTATAGTAATAATGCAGGTTCTGCACCTCAGTGCACTGTTGGTGTTATTAAGGACGTCTATAATCAAAGTGCGGCTTCTATAGCTATGACAGCACCTCTTCAGGGTATGGCTTGGTCTAAGTCACAATTTTGTAGTGCACACTGTAACTTTTCTGAAATTACAGTTTTTGTCACACATTGTTATAGTAGTGGTAGCGGGTCTTGTCCTATAACAGGCATGATTCCACGTGATCATATTCGTATTTCTGCAATGAAAAATGGTTCTTTATTTTATAATTTAACAGTTAGCGTATCTAAATACCCTAATTTTAAATCTTTTCAATGTGTTAACAACTTCACATCTGTTTATTTAAATGGTGATCTTGTTTTTACTTCCAACAAAACTACTGATGTTACGTCAGCAGGTGTGTATTTTAAAGCAGGTGGACCTGTAAATTATAATATTATGAAAGAATTTAAGGTTCTTGCTTACTTTGTTAATGGTACAGCACAAGATGTAATTTTGTGCGATAATTCCCCCAAGGGTTTGCTAGCCTGTCAATATAACACTGGCAATTTTTCAGATGGCTTTTATCCTTTTACTAATAGTACTTTAGTTAGGGAAAAGTTCATTGTCTATCGCGAAAGTAGTGTTAATACTACTCTGGCGTTAACTAATTTCACTTTTACTAATGTAAGTAATGCACAGCCTAATAGTGGTGGTGTTAATACTTTTCATTTATATCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTGTCATTTCTGAGTCAGTTTGTGTATAAGGCAAGTGATTTTATGTATGGGTCTTACCACCCTAGTTGTTCTTTTAGACCAGAAACCATTAATAGTGGTTTGTGGTTTAATTCCTTGTCAGTTTCTCTTACTTATGGACCCCTACAGGGAGGGTGTAAGCAATCTGTTTTTAGTGGTAAGGCAACGTGTTGTTATGCCTACTCTTATAATGGCCCAAGGGCATGTAAAGGTGTTTATTCAGGTGAATTAAGCATGAATTTTGAATGTGGATTGCTGGTTTATGTTACTAAGAGTCATGGCTCTCGTATACAGACTAGAACGGAGCCCTTAGTATTAACGCAACACAATTATAATAATATTACTTTAGATAAGTGTGTTGCTTATAATATATATGGCAGAGTAGGCCAAGGTTTTATTACTAATGTGACTGATTCTGCTGCTAATTTTAGTTATTTAGCAGATGGTGGGTTAGCTATTTTAGATACGTCGGGTGCCATAGATGTTTTTGTTGTAAAGGGCAGCTATGGTCTTAATTATTACAAGGTTAATCCTTGTGAAGATGTTAACCAACAGTTTGTAGTGTCTGGTGGCAATATAGTTGGCATTCTTACTTCTAGAAATGAAACAGGTTCTGAACAGGTTGAGAACCAGTTTTATGTTAAGTTAACCAATAGCTCACATCGTCGCAGGCGTTCTATTGGCCAAAACGTAACAACTTGCCCTTATGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus IBV-CU2-SP1'       TCCGACCATCTGCTGGTTGGCATATGCATGGGGGTGCTTATGCGGTAGTTAATGTTTCTTTAGAATATAGTAATGCAGGTTCACGGCAATGTACCGCCGGTGCTATTTATTGGAGTAAGAATTTCAGTGCTGCTTCTGTGGCTATGACAGCACCTCAAAATGGTATGTCATGGTCAACTTCAGAATTTTGTACGGCTCACTGCAATTTTACTGATTTTGTAGTATTTGTTACACATTGTTATAAAAGTAGTTCTGGTTCATGTCCTTTAACAGGTATGATTCCACAGAATTATATTCGTATTTCTGCTATGAGAAATAATAGTTTGTTTTATAATTTAACAGTTGCTGTGACTAAATATTCTAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACATCTGTGTACCTAAACGGCGATCTTGTGTTCACTTCTAATGATACTCAAGATGTTAGTGCAGCAGGTGTACATTTTAAGAACGGTGGACCTATAACTTATAAGGTTATGAAACAAGTTGATGTCCTAGCTTATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus EG_12120s_2012'    GCGGTAGTTAATGTTTCTTTAGAATATAGTAATGCAGGTTCACAGCAATGTACCGCCGGTGCTATTTATTGGAGTAAGAATTTCAGTGCTGCTTCTGTGGCTATGACAGCACCTCAAAATGGTATGTCATGGTCAACTTCAGAATTTTGTACGGCTCACTGCAATTTTACTGATTTTGTAGTATTTGTTACACATTGTTATAAAAGCAGTTCTGGGTCATGTCCTTTAACAGGTATGATTCCACAGCATTATATTCGTATTTCTGCTATGAGAAATAATAGTTTGTTTTATAATTTAACAGTTGCTGTGACTAAATATTCTAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACATCTGTGTACCTAAACGGCGATCTTGTGTTTACTTCTAATGATACTCAAGATGTTAGTGCAGCAGGTGTACATTTTAAGAACGGTGGACCTATAACTTATAAGGTTATGAAACAAGTTGATGTCCTAGCTTATTTTGTTAATGGTACAGCACAAGATGTTATCTTGTGTGATGGTTCACCAAGAGGTCTTTTAGCATGCCAGTATAATACTGGTAATTTTTCAGATGGTTTGTATCCTTTTACTAATACTAGTTTAGTTAAGGAAAAGTTTGTTGTTTATCGTGAAAATAGTGTTAACACCACCTTGGTTTTGACAAATTTTACATTTCATAATGAAAGTAATGCCCATCCTAATAATGGTGGTGTTCATACTATTAGTTTATACCAAACACACACAGCTCAGAGTGGTTATTATAATTTTAATTTCTCATTTTTGAGTAGTTTTGTTTATAAACCTTCTGATTTTATGTATGGGTCTTACCACCCGCAGTGTGATTTTAGACCAGAAACTATTAATAATGGTTTGTGGTTTAATTCTCTATCTGTTTCACTAGCCTATGGGCCTCTACAAGGTGGTTGTAAGCAGTCTGTCTTTAATAATAGGGCAACGTGTTGTTATGCTTATTCATACAATGGTCCCCGTTTGTGTAAAGGTGTTTATACTGGTGAATTACAACAATATTTTGAATGTGGATTGCTGGTTTATGTAACTAAGAGTGGTGGCTCTCGTATACAAACCAGGAATGAACCACTTGTGTTAACTCATCACAATTATAATAATATTACTTTGGATAGGTGTGTAGAGTATAATATATATGGCAGATTTGGCCAAGGTTTTATTACTAATGTAACAGACTCAGCTGCCAATTATAATTATTTAGCAGATGGTGGTTTAGCCATCCTAGACACATCTGGTGCCATAGACATCTTCGTTGTACAAGGTGAGTATGGTCCTAATTATTATAAGGTCAATCCTTGTGAAGATGTTAACCAGCAGTTTGTAGTGTCTGGTGGTGGCATAGTAGGTGTTCTCACATCGCATAATGAAACTGGTTCTCAACAGCTTGAAAATCGGTTCTATGTTAAACTTACCAATAGTACACGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Eg_1265B_2012'     ATGTTGGGGAAGTCACTGTTTATAGTGACTCTTTTGTTTGCACTATGTAGTGCCGCTTTGTTTGATAATAATGAAACCGTTTACTACTACCAAAGTGCCTTTAAACCGGCTGATGGATGGCATTTGCATGGTGGTGCTTATGCAGTAGTAAACGTTTCTTTAGAAACTAATAATGCAGGCACAGTTTCACAATGCACTGCAGGGTCTATCTATTGGAGTAAAAATTTTAGTGCATCTTCTGTAGCCATGACAGCACCTGATACAGGTATGTCTTGGTCAGCCAGCCAGTTCTGTACGGCTCACTGTAACTTTACAGATTTTACAGTGTTTGTTACACATTGTTACAAAAATGGTCAGGGTTCATGTCCTTTAACAGGTCCGATTCCACGGAATCATATTCGTATTTCTGCTATGAAAAATAGCAGTTTGTTTTATAACTTAACAGTTGCTGTGACTAAATATCCCAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACATCTGTATTCTTAAATGGTGATCTCGTTTTTACTTCTAATGATACTAAAGATGTTAGTGCAGCAGGTGTACATTTTAAGAGCGGTGGACCTATAACTTATAAGGTTATGAAACAAGTTGATGTCCTAGCTTATTTTGTTAATGGTACAGCACAAGATGTTATTTTGTGTGATAATTCACCAAGAGGTTTATTAGCATGCCAGTATAATACTGGTAATTTTTCAGATGGCTTCTATCCTTTTACTAATGTTAGTTTAGTTAAGGAAAAGTTTGTTGTTTATCGTGAAAATAGTGTTAACACCACCTTGGTTTTGACAAATTTTACATTTTATAATGAAAGTAATGCCCATCCTAATAATGGTGGTGTTCATACTATTAGTTTATACCAAACACACACAGCTCAGAGTGGTTATTATAATTTTAATTTCTCATTTCTGAGTAGTTTTGTTTATAAACCTTCTGATTTTATGTATGGGTCTTACCACCCGCAGTGTGATTTTAGACCAGAAACTATTAATAATGGTTTGTGGTTTAATTCTCTATCTGTTTCACTAGCCTATGGGCCTCTACAAGGTGGTTGTAAGCAGTCTGTCTTTAACAATAGGGCAACGTGTTGTTATGCTTACTCATACAATGGTCCCCGTTTGTGTAAAGGTGTTTATACTGGTGAATTACAACAATATTTTGAATGTGGATTGTTGGTTTATGTAACTAAGAGTGGTGGCTCTCGTATACAAACCAGGAATGAACCCCTTGTGTTAACTCATCACAATTATAATAATATTACTTTGGATAGGTGTGTAGAGTATAATATATATGGCAGATTTGGCCAAGGTTTTATTACTAATGTAACAGACTCAGCTGCCAATTATAATTATTTAGCAGATGGTGGTTTAGCCATCCTAGACACATCTGGTGCCATAGACATCTTCGTTGTACAAGGTGAATATGGTCTTAATTATTATAAGGTCAACCCTTGTGAAGATGTTAACCAGCAGTTTGTAGTGTCTGGTGGTGGCATAGTAGGTGTTCTCACATCGCATAATGAAACTGGTTCGCAACAGCTTGAAAATCGGTTCTATGTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Eg_CLEVB-2_IBV_012' ATGTTGGTGAAGTCACTGTTTATAGTGACTCTTTTGTTTGCACTATGCAGTGCCGCTTTGTTTGACAACAATGAGACTGTTTACTACTACCAGAGTGCCTTCCGACCATCCACTGGCTGGCATATGCATGGGGGTGCTTATGCAGTAGTTAATGTTTCTGTAGAATATAAAAACGCAGGCTCAGGTCAATGTACTGCAGGGTCTATCTATTGGAGTAAAAATTTTACTGCATCTTCTGTAGCCATGACAGCACCTGATACAGGTATGTCTTGGTCAGCCAGCCAGTTTTGTACGGCTCACTGTAACTTTACAGATTTTACAGTGTTTGTTACACATTGTTACAAAAATGGTCAGGGTTCATGTCCTTTAACAGGTCTGATTCCACAGAATCATATTCGTATTTCTGCTATGAAAAATAGCAGGTTGTTTTATAACTTAACAGTTGCTGTGACTAAATATCCCAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACAGCTGTATACTTAAATGGTGATCTCGTTTTTACTTCTAATGATACTAAAGATGTTAGTGCAGCAGGTGTTTATTTTAGCAGTGGTGGACCTATAACTTATAAGGTTATGAAACAAGTTGATGTCCTAGCTTATTTTGTTAATGGTACAGCACAAGATGTTATTTTGTGTGATAATTCACCAAGAGGTTTATTAGCATGCCAGTATAATACTGGTAATTTTTCAGATGGCTTTTATCCTTTTACTAATGTTAGTTTAGTTAAAGAAAGGTTTGTTGTGTATCGTGAAACTAGTGTTAACACCACGTTGGTTTTAACTAATTTCACCTTTACAAATGTAAGTAATGCCTCGCCTAATACAGGTGGTGTCAATACTATTAACATATATCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTTTCTTTTCTGAGTAGTTTTGTTTATAAGCAGTCTGATTTTATGTATGGGTCTTATCACCCAAAGTGTGATTTTAGACCGGAAACTATTAATAATGGTTTGTGGTTTAATTCTCTATCTGTTTCACTAGCCTATGGGCCGCTACAAGGTGGTTGTAAGCAGTCTGTCTTTAGTAATAGGGCAACGTGTTGTTATGCTTATTCATACAATGGTCCCCGTTTGTGTAAAGGTGTTTATATTGGTGAATTACAACAATATTTTGAATGTGGATTGCTGGTTTATGTAACTAAGAGTGATGGTTCTCGCATACAAACCAGGAATGAACCACTTGTGTTAACTCATTACAATTATAATAATATTACTTTGGATAGGTGTGTAGAGTATAATATATATGGCAGATCTGGCCAAGGTTTTATTATTAATGTAACAGCCTCAGCTGCCAATTATAATTATTTAGCAGATGGTGGTTTAGCCATCCTAGACACATCTGGTGCCATAGACATCTTCGTTGTACAAGGTGAATATGGTCCTAATTATTATAAGGTCAACCCTTGTGAAGATGTTAACCAGCAGTTTGTAGTGTCTGGTGGTGGCATAGTAGGTGTTCTCACATCGCATAATGAAACTGGTTCTCAACAGCTTGAAAATCGGTTCTATGTTAAACTTACCAATAGTAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Mans-1'            GTAGGTGTTAGTTAGAGATGTTGGTGAAGTCACTGTTCATAGTGACTCTTTTGTTTGCACTATGCAGTGCCGCTTTGTTTGACAATAATGAAACCGTTTACTACTACCAAAGTGCCTTCAGACCATCCACTGGCTGGCATATGCATGGGGGTGCTTATGCAGTAGTTAATGTTTCTGTAGAATATAGAAACGCAGGCTCAGGTCAATGTACTGCAGGGTCTATCTATTGGAGTAAAAATTTTAGTGCATCTTCTGTAGCCATGACAGCACCTGATACAGGTATGTCTTGGTCAGCCAGCCAGTTCTGTACGGCTCACTGTAACTTTACAGATTTTACAGTGTTTGTTACACATTGTTACAAAAATGGTCAGGGTTCATGTCCTTTAACAGGTCTGATTCCACAGAATCATATTCGTATTTCTGCTATGAAAAATAGCAGTTTGTTTTATAACTTAACAGTTGCTGTGACTAAATATCCCAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACAGCTGTATACTTAAATGGTGATCTCGTTTTTACTTCTAATGATACTAAAGATGTTAGTGCAGCAGGTGTTTATTTTAGCAGTGGTGGACCTATAACTTATAAGGTTATGAAACAAGTTGATGTCCTAGCTTATTTTGTTAATGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Egypt_D_89'        ACTTAGTAGTTAATTTACTAAGGAACGGTAAATTATTGGTTAGAGATGTTGGAGAGGTCACTGTTATTAGCGACTCTTTTGTCTGCACTATGTAGTGCCAATCTGTTTGGTAATAATTCTTACGTGTACTACTACCAAAGTGCCTTCAGACCACCTGATGGTTGGCATTTACATGGTGGTGCTTATGAAGTAGTAAATGTTTCTAAGGAATCTAGTAATGCAGGCACGACTGGGTGTACTGTCGGTGCTATTTATTGGAGTAAGAATTTCAGTGCTGCTTCCGTGGCTATGACAGCACCTCAAAATGGTATGTCATGGTCTACTGAGCAATTTTGTACGGCTCACTGCAATTTTACTGATTTTGTAGTATTTGTTACACATTGCTATAAAAGTAGTCATGGTTTATGTCCTTTAACAGGTCTGATTCCACAGAATCATATTCGTATTTCTGCTATGAAAAATAGCAGTTTGTTTTATAACTTAACAGTTGCTGTGACTAAATATCCTAGATTTAAGTCGCTTCAGTGTGTTAATAATATGACATCTGTATACCTAAATGGCGATCTCGTTTTTACTTCTAACGAGACTAAAGATGTTAGTGCTGCAGGTGTTCATTTTAAAGCTGGTGGCCCTATAACTTATAAAGTTATGCGGGAAGTTAAAGCATTGGCTTATTTTGTTAATGGCACCGCACAAGATGTGATTCTTTGTGACGGTTCACC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Moroccan-G_83'     ATGTTGGTCAAACCTCTTTTACTAGTGACTCTTTTGTTTGCACTATGTAGTGCCCTTTTATATGATGAGGGACATAATTACGTTTACTACTACCAAAGCGCCTTTAGGCCTGGTGTAGGTTGGCACTTACATGGGGGTGCTTATGCAGTAGATAGTGTTTTTAATGTAACCAATGCAGGCAGTGCACATTGCACTGCTGGTACTTTTTATGAAAGCCTTAATATTTCTGCCGCTTCTGTAGCCATGACAGCACCAGATACTGGTATGTCTTGGTCAGTTGTACAATTTTGTACAGCTCATTGTAACTTCTCGGACGTTACAGTGTTCGTTACGCATTGTTATATAAATCAACAAGGTAGTTGTTCATTGACAGGTATGATTCCTAAGAATCATATTCGTATTGCTGCTATGAAGAATAGACAGTTGTTTTTCAACTCAACAGTTAGCGTATCTAAATACCCTAGATTTAAATCGCTTCAATGTGTTAGCAATTTTACATCTGTTTATTTAAATGGCGACCTTGTTTTCTCTTCTAATGAAACTTCTCCTGTTACGGGTGCAGGCGTTTATTTTGGACGTGGTGGGCCTGTAACTTATAAAGTTATGAAAGAAGTTAAAGCCCTAGCCTACTTTGTTAATGGTACCGCACAAGAGGTTATTTTATGTGATAACTCACCTAGAGGTTTGCTTGCATGTCAGTATAACACTGGTAATTTTTCAGATGGATTCTACCCTTTTACTAATTCTTCTTTAGTTAAGGATAGGTTTATTGTATATCGAGAAAGTAGCACTAACACTACTTTAGAGTTAACTAATTTCACTTTTACTAATGTAAGTAATGCTTCTCCCAATTCAGGTGGCGTTGATACTTTTCAATTATATCAAACACATACCGCTCAGGATGGTTATTATAATTTTAATTTATCATTTCTGAGTAGTTTTGTGTATATACCATCTGACTTTATGTATGGGTCATATCACCCAGAGTGCACGTTTAGACCAGAGACTATTAATAATGGCTTATGGTTTAATTCATTATCTGTGTCACTTACTTACGGACCCATTCAAGGTGGTTGTAAGCAATCTGTTTTTAATAAGAGAGCAACTTGTTGCTATGCTTATTCTTATCAAGGTCCTAATAGGTGTAAGGGTGTTTATAGAGGGGAGCTAAAGCAAGAATTTGAATGTGGACTTCTAGTTTATGTAACTAAGAGTGGTGGCTCTCGTATACAAACTAGAAGTGAACCACTGGTGTTAACTCAATATAATTATAACAACATTACTTTAAATAAGTGTGTTGATTATAATATATATGGTAGAGTTGGCCAAGGTTTTATTACTAATGTAACTGAAGCAACTGCTAATTATAGTTATCTAGCAGATGGTGGTTTAGCTATTTTAGATACTTCAGGAGCCATAGACATATTTGTTGTTCAAGGTGCATATGGTCTTAATTATTATAAGGTTAATCCCTGTGAAGATGTTAACCAACAGTTTGTAGTGTCTGGTGGCAACTTAGTTGGCATTCTTACATCTTATAATGAAACAGGTTCTGAATCTATTGAGAATCAGTTTTATATTAAACTCACTATCGGAACACGTCGCTCTAGACGTTCTATTACTGGGAATGTTACAAATTGCCCTTATGTTAGTTATGGCAAGTTTTGTATAAAACCAGATGGTTCTTTATCTACAATAGTACCACAAGAATTAGAACATTTTGTGGCGCCTTTACTCAATGTTACTGAGCATGTGCTCATACCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus IBV_morocco_30'    CGCTTTTACTAGTGACTCTTTGGTGTGCACTATGTAGTGCTTTGCTCTATGATAATGGTACCTACGTTTACTACTACCAAAGTGCTTTCAGGCCATTTAATGGTTGGCATATGCATGGGGGTGCTTATGCAGTGGTAAATGTTTCTACAGAACATAATAATGCAGGTAGTGCATCTACTTGCACTGCTGGTGTTATTCATTGGAGTAAGAATTTTACTGCTGCTTCTGTAGCCATGACAGCACCTAGTCCTGGTATGGAATGGTCTACTAGACAATTTTGTACTGCACACTGTAATTTTACTGATTTTACAGTGTTCGTTACACATTGTTTTAAAGCTGGAACTGGTAATTGTCCCTTAACAGGTCTTGTTCCAAATGGTCATATTCGTATTTCTGCTATGAAAGAAGGAAGTACCTCCTTGTTTTATAACTTAACAGTTTCTGTGGCTAAATATTCTAAATTTAAGTCGCTGCAATGTGTTAACAATTTTACATCTGTATACCTAAATGGTGATCTTGTTTTTACTTCTAATGAGACTAAAGATGTTAGTGGTGCAGGTGTTTATTTTAAAGCTGGCGGTCCCATAACCTATAAAGTTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus IBV_morocco_38'    CGCTTTTACTAGTGACTCTTTGGTGTGCACTATGTAGTGCTTTGCTGTATGATCATGGTACCTACGTTTACTACTACCAAAGTGCTTTCAGGCCATTTAATGGTTGGCATATGCATGGGGGTGCTTATGCAGTGGTAAATGTTTCTACAGAAAATAATAATGCAGGTAGTGCATCTACTTGCACTGCTGGTGTTATTTATTGGAGTAAGAATTTTACTGCTGCTTCTGTAGCCATGACAGCACCTAGTCCTGGTATGGCATGGTCTACTAGCCAATTTTGTACTGCACACTGTAATTTTACTGATTTTACAGTGTTCGTTACACATTGTTTTAAAGCCGGAGCTGGTAATTGTCCCTTAACAGGTCTTGTTCCAAATGGTCATATTCGTATTTCTGCTATGAAAGAAGGAAGTAACTTCTTGTTTTATAACTTAACAGTTTCTGTGACTAAATATTCTAAATTTAAGTCGCTGCAATGTGTTAACAATTTTACATCTGTATACCTAAATGGTGATCTTGTTTTTACTTCTAATGAGACTAAAGATGTTAGTGGTGCAGGTGTTTATTTTAAAGCTGGCGGTCCCATAACCTATAAAGTTATGAGAGAAGTTAAAGCTTTGGCTTATTTTGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus IBV_Morocco_01'    ATGTTGGTCAAACCGCTTTTACTAGTGACTCTTTGGTGTGCACTATGTAGTGCTTTGCTCTATGATCATGGTACCTACGTTTACTACTACCAAAGTGCTTTCAGGCCTTTTAATGGTTGGCATATGCATGGGGGTGCCTATGCAGTGGTAAATGTTTCTAAAGAAAATAATAATGCAGGTAGTGCACGTACTTGCACTGCTGGTGCTATTTATTGGAGTAAGAATTTTACTGCTGCTTCTGTAGCCATGACAGCACCTAGTCCTGGTATGGCATGGTCTACTAACCAATTTTGTACTGCACACTGTAATTTTACTGATTTTACAGTGTTCGTTACACATTGTTTTAAAGACGGACCTGATAATTGTCCCTTAACAGGTCTTATTCCAAATGGTCATATTCGTATTTCTGCTATGAAACAAGGCAGTAAATTCTTGTTTTATAATTTAACAGTTTCTGTGACTAAATATTCTAAATTTAAGTCGCTGCAATGTGTTAACAATTTTACATCTGTATACCTAAATGGTGATCTTGTTTTTACTTCTAATGAGACTAAAGATGTTAGTGGTGCAGGTGTTTATTTTAAAGCTGGCGGTCCCATAACCTATAAAGTTATGAGAGAAGTTAAAGCTTTGGCTTATTTTGTTAATGGTACAGCACAAGATGTAATTTTGTGCGACAATTCCCCCAAGGGTTTGCTAGCTTGCCAATACAACACCGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Algeria_26_b3'     ATGTTGGTACAACCACTTTTACTAGTGACTCTTTTGTATGCACTATGTAGTGCTGTTTTATTCAATGATAACTATAATTATTACTACCAAAGTGCCTTTAGACCAAGTGATGGGTGGCATATGCATGGGGGTGCTTATGCAGTGATTAATGTTACTACAGAACACCAAAATGCCGGCGCGGCATCACAATGCACAGCTGGCATTATTAGTTATAGTCGTAATCTTACAGCTTCTTCTGTAGCTATGACAGCACCTGATGCGGGCATGTCATGGTCTACCAGCCAATTTTGTACGGCGCACTGTAATTTTTCTGATGTTACAGTGTTTGTTACTCATTGTTTTAAAGATGGTGTTGGTACTTGCCCTTTAACAGGTAAGATTCCGCAGAATTTTATTCGTGTTTCTGCTATGAAAGGTGGCCAGCTGTTTTATAATTTAACAGTTAGTGTATCTAAGTACCGTAAATTTAAGTCATTGCAATGTGTTAATAATTTCACATCTGTCTACTTAAATGGTGATCTTGTTTACACTTCTAATCAGACTACAGATGTCACTGGTTCAGGTGTTTATTTCAAAGCAGGTGGGCCTATAACTTACAAACTTATGAAAGAAGTTAAAGCACTTGCCTATTTTGTTAATGGTACTGCACACGATATTATCTTGTGTGATAAGTCACCTAGAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Algeria_26_b2'     ATGTTGGTACAACCACTTTTACTAGTGACTCTTTTGTATGCACTATGTAGTGCTGTTTTATTCAATGATAACTATAATTATTACTACCAAAGTGCCTTTAGACCAAGTGATGGGTGGCATATGCATGGGGGTGCTTATGCAGTGATTAATGTTACTACAGAAAAACCAAATGCCGGCTCGGCATCACAATGCACAGCTGGCATTATTAGTTATAGTCGTAATCTTATAGCTTCTTCTGTAGCTATGACAGCACCTGATGCGGGCATGTCATGGTCTACCGGCCAATTTTGTACGGCGCACTGTAATTTTTCTGATGTTACAGTGTTTGTTACTCATTGTTTTAAAGATGGTGTTGGTAATTGCCCTTTAACAGGTAAGATTCCGCAGAATTTTATTCGTGTTTCTGCTATGAAAGGTGGCCAGCTGTTTTATAATTTAACAGTTAGTGTATCTAAGTACCGTAAATTTAAGTCATTGCAATGTGTTAATAATTTCACATCTGTCTACTTAAATGGTGATCTTGTTTACACTTCTAATCAGACTACAGATGTCACTGGTTCAGGTGTTTATTTCAAAGAAGGTGGGCCTATAACTTACAAACTTATGAAAGAAGTTAAAGTACTTGCCTATTTTGTTAATGGTACTGCACGCGATATTATCTTGTGTGATAAGTCACCTAGAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Algeria_26_b1'     ATGTTGGTACAACCACTTTCACTAGTGACTCTTTTGTATGCACTATGTAGTGCTGTTTTATTCAATGATAACTATAATTATTACTACCAAAGTGCCTTTAGACCAAGTAATGGGTGGCATATGCATGGGGGTGCTTATGCAGTGATTAATGTTACTACAGAATACCAAAATGCCGGCTCGGCATCACAATGCACAGCTGGCATTATTAGTTATAGTCGTAATCTTACAGCTTCTTCTGTAGCTATGACAGCACCTGATGCGGGCATGTCATGGTCTACCAGCCAATTTTGTACGGCGCACTGTAATTTTTCTGATGTTACAGTGTTTGTTACTCATTGTTTTAAAGATGGTGTTGGTAATTGCCCTTTAACAGGTAAGATTCCGCAGAATTTTATTCTTGTTTCTGCTATGAAAGGTGGCCAGCTGTTTTATAATTTAACAGTTAGTGTATCTAAGTACCGTAAATTTAAGTCATTGCAATGTGTTAATAATTTCACATCTGTCTATTTAAATGGTGATCTTGTTTACACTTCTAATCAGACTACAGATGTCACTGGTTCAGGTGTTTATTTCAAAGCAGGTGGGCCTATAACTTACAAATTTATGAAAGAAGTTAAAGCACTTGCCTATTTTGTTAATGGTACTGCACACGATATTATCTTGTGTGATAAGTCACCTAGAGGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Tunisia_TN296_07'  CGGGGTTGTGAGGTCATACCGCACGCTTCTAGAGATATGCAGTCGGATGAATCTTTTGGGCCATTTCTTGGAGTAAAATTTCAGGTGGAGACAGGGGCTATGACAGCGCCTCAAAATGGTATGTCATGGTCTACTCAACAGTTTTGTACTGCTCACTGTTATTTCTCTGATATTACGGTGTTTGTCACACATTGTTTTAAAAGCGGACAGGGTAAATGTCCTTTAACAGGTTTAATACCACAAGGCTATATACGCATTGCTGCTATGCGAGGTGGTAATTCGCCTTTTTATAACTTAACAGTTTCCGTGACTAAATATCCTAAATTTAAGTCACTTCAATGTGTTAATAATCAAACATCTGTGTACTTAAATGGTGATCTTGTTTTACTTCTATTGAGACTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus Tunisia_TN556_07'  GCCCGGGATAGCAAACGTCTCTTTAGATCCCAGAATGCAGGCGGTTCTGAATGCACTGCAGGGGCCATTTTTTGGAGTAAAAATTTCAGTGCGGCTTCTGTGGCTATGACAGCGCCTCAAAATGGTATGTCATGGTCTGTTCAACAGTTTTGTACTGCCCACTGTAATTTCTCTGATTTTACGGTGTTTGTCACACATTGTTTTAAAAGCGGAGCGGGTACATGTCCTTTAACAGGTTTTATACCACAAGGCTTTATACGCATTGCTGCTATGCGAGGTGGTAATTCGCCTTTTTATAACTTAACAGTTCCCGTGACTAAATATCCTAAATTTAAGTCACTTCAATGTGTTAATAATCAAACATCTGTGTACTTAAATGGTGATCTTGTTTTTACTTCTAATGAGACTAAAGATGTTAGTGCTGCAGGTGTTCATTTTAAAGCTGGGTGGCCTATAACTTATAAAGTTATGAAAGGAGTTAAAGCCCTAGCCTACTTTATTAAGGGTACCGCAAAAGAGGTTATTTTATGTGAAACTCACCAGAAGTTTTGCTTGCAGGTCAATACAATACGGGGAATTTTCAAAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus TN335_01'          GCCAATACAACACCGGAATTCACGAAAAATGCAGTCGGTTCTGAATGCACTGCAGGGGCCATTTTTTGGAGTAAAAATTTCAGTGCGGCTTCCGTGGCTATGACAGCGCCTCATAATGGTATGTCATGGTCTACTAGCCAATTTTGTACAGCTCACTGTAACTTCACTGATTTTACAGTGTTCGTTACACATTGTTTTAAAGCTGGAACGGGTAAATGCCCTCTAACAGGTCTAATACCTCAGGGCTTTGTACGCATTGCTGCTATGAGAAAAGGAGGTAGTGCAGCTGCCGACTTGTTTTTCAATTTAACAGTTTCTGTTACTAAATATCCTAGATTCAAGTCACTTCAATGTGTTAATAATCAAACATCTGTGTACTTAAACGGTGATCTTGTTTTTACTTCTAATGAGACTAAAGATGTTAGTGCTGCAGGTGTTCATTTTAAAGCTGGTGGCCCTATACTTATAAAGTTATGAGAGAAGTTAAAGCCCTACCTATTTTATTAATGGACCCCCCAAAGAGGTTATTTTATGCCGATAACTCACCTAGAGGGTTGGTTTGCATGCCAATCAACACCGGAAAATTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus TN200_01'          TCGGTTACCAACATAACGTTAGAAACTAATAATGCAGTCGGTTCTGAATGCACTGCAGGGGCCATTTTTTGGAGTAAAAATTTCAGTGCGGCTTCCGTGGCTATGACAGCGCCTCATAATGGTATGTCATGGTCTACTAGCCAATTTTGTACAGCTCACTGTAACTTCACTGATTTTACAGTGTTCGTTACACATTGTTTTAAAGCTGGAACGGGTAAATGCCCTCTAACAGGTCTAATACCTCAGGGCTTTGTACGCATTGCTGCTATGAGAAAAGGAGGTAGTGCAGCTGCCGACTTGTTTTTCAATTTAACAGTTTCTGTTACTAAATATCCTAGATTCAAGTCACTTCAATGTGTTAATAATCAAACATCTGTGTACTTAAACGGTGATCTTGTTTTTACTTCTAATGAGACTAAAGATGTTAGTGCTGCAGGTGTTCATTTTAAAGCTGGTGGCCCTATAACTTATAAAGTTATGAGAGAAGTTAAAGCCCTAGCCTATTTTATTAATGGTACCCGCACAAGAGGTTATTTTATGCGATAACTCACCTAGAGGTTTGCTTGCTTGCCAATACAACACCGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus TN200_00'          CAAGTGGTCAATGTTATTAATGAATATAATAATGCAGGTTCAGCATCAACATGCACTGCAGGTGTTATTTATTATAGTAAAAATTTTACTGCTTCTTCTGTAGCCATGACTGCACCACCATTAGGAATGTCATGGTCCACGTCACAATTTTGTACGGCTCACTGTAATTTTACTACATTTACAGTGTTCGTTACACATTGTTTTAAAAGCGGTGCAAATCAATGTCCTTTAACTGGTTTAATACAACAGGGATATATTCGTGTCTCTGCTATGAAAACGGAAGGTGAACCACACCTATTTTATAATTTAACGCTGCCAACGACTAAACATCCTAAGTTTAGGTCGCTACAATGTGTTAATAATCAAACATCTGTGTATTTAAATGGTGATCTTGTCTTTACTTCTAATGAGACTTTAGATGTTAGTGCGCAGGTGTTCATTTTAAAGCTGGGGGCCTGTACTTATAAAGTATGAGAGAAGTTAAGCCCTTGCTTATTTTGTAATGGACTGCACATGAGGAATTTTGTGGGCAATTCCCCGGGGGTTTGTTGCTGCAATCAACCCCGGGGTTGGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus NGA_293_2006'      ATGTTGGTAACACCTCTTTTACTAGTGACTCTTTTGTGTGCACTATGTAGTGCTGCTTTGTATGACAGTAGTTCTTACGTGTACTACTACCAAAGTGCCTTCAGACCACCTGATGGTTGGCATTTACATGGGGGTGCGTATGCGGTTGTTAATATTTCTAGTGAATTTAATAATGCAGGCTCTTCACCTGAGTGTACTGTTGGTATTATCCATGGTGGTCGTGTTGTTAATGCTTCTTCTATAGCTATGACGGCACCGTCACCAGGTATGGCTTGGTCTAGCAGTCAGTTTTGTACTGCATACTGTAACTTTTCAGATACTGTAGTATTTGTTACACATTGCTATAAACATAGTCCTGGTTCATGTCCTTTAACAGGTCTGATTTCACAGAATCATATTCGTATTTCTGCTATGAAAAATAGCAGTTTGTTTTATAACTTAACAGTTGCTGTGACTAAATATCCTAAATTTAAGTCGCTTCAGTGTGTTAATAATATGACATCTGTATACCTAAATGGCGACCTCGTTTTTACTTCTAACGAGACTAAAGATGTTAGTGCTGCAGGTGTTTATTTTAAATCTGGTGGCCCTATAACTTATAAAGTTATGCGGGAAGTTAAAGCATTGGCTTATTTTGTTAATGGCACCGCACAAGATGTGATTCTTTGTGACGGTTCACCTAAAGGTTTGTTAGCATGCCAGTATAATACTGGCAATTTTTCAGATGGCTTTTATCCTTTTACTAATAGTAGTTTAGTTAAGCAGAAGTTTATTGTCTATCGTGAAAATAGTGTTAATACTACTTTTACGTTACACAATTTCACTTTTTATAATGAGACTGGCGCCAACCCAAATCCTAGTGGTGTCCAGAATATTAAAACTTACCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTTTCCTTTCTGAGTAGTTTTGTTTATAAGGAGTCTGATTTTATGTATGGATCTTATCACCCACGTTGTAATTTTAGACTAGAAACTATTAATAATGGTTTGTGGTTTAACTCACTTTCCGTCTCTCTTGGTTACGGACCTATCCAAGGTGGTTGTAAGCAATCTGTGTTCGAAAATAGGGCAACTTGTTGTTACGCCTACTCGTATAATGGACCTTCTCTTTGCAAAGGTGTTTATAACGGTGAGTTAACACAAAGCTTTGAATGTGGATTGCTGGTTTTTGTGACTAAGACTGATGGTTCCCGTATACAAACTAGAAATGAACCATTTACGTTAACCCAGCACAATTATAATAATATTACTTTAGATAGATGTGTTGAGTATAATATATATGGTAGAGTTGGACAAGGTTTTATTACTAATGTAACTGACTATGCCAGTGATTATAATTATCTAGCTGATGGTGGTATGGCTATTTTAGATACATCTGGCGCCATAGACATCTTCGTTGTACAAGGTGAATATGGTCTTAATTATTACAAAGTTAACCCTTGTGATGATGTTAATCAGCAGTTTGTAGTTTCTGGTGGTAAATTAGTAGGTATTCTTACGTCACGTAATGAGACTGGCTCGCAGCCTCTTGAAAACCAGTTCTATATTAAAATTATTAATGGAACTCGTCGTTCTAGACGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	'Infectious bronchitis virus NGA_A116E7_2006'   ATGTTGGGAGCACCGCTTTTACTACTGACTCTTTTGTGTGCGCTATGTAGTGCTAATTTGATTGGTGATTCTTATGTTTACTACTACCAGAGTGAGTTTAGACCACCTGATGGTTGGAATTTACATGGTGGTGCTTACGCAGTAGTTAGTACTCTTAATGAAACCAACAATGCTGGCACACAGCAGGGGTGTACAGTTGGTGTTATTAAAGGTGGCCATGGTTTTAATGCTTCTTCTGTAGCCATTACTGCCCCACTTTCAGGTATGGCCTGGTCAAAATCCCAATTTTGTACAGCGCATTGTAATTTTAGTGATATTACAGTGTTTGTAACACATTGTTTTAAAGATGGTGCTGGATCTTGTCCACTTACAGGCAAGATCCCACAGAACTTTCTGCGTATTTCTGCCCTTAGAGGAGGCAAGCTGTTTTATAATTTAACAGTTAGTGTAGTTAAGTACCCTACTTTTAAATCTTTTCAATGTGTTAATAATCAGACATCTGTATATTTAAATGGTGATCTTGTTTTTACTTCTAATGAGACTATAGATGTTAAGGACGCTGGTGTTTACTTTAAAGCTGGCGGACCTGTATATTATAAAGTTATGAGAGAGGTCAAAGTTTTGGCCTACTTTGTTAATGGCACTGCACAAGATGTTATTTTATGTGATGGATCACCCAGAGGTTTGTTGGCTTGTCAGTATAACACAGGTAATTTCTCTGATGGCTTCTATCCTTTTACTAATTCTAGTTTAGTTAAGGAAAAGTTCATTGTGTATCGTGAAAGTAGTTTTAATACTACTTTGGAATTAACTACATTTAATTTTACTAATGTAACTAACGCCCCTCCTAATAGTGGTGGTGTTAACACTTTCCAATTGTATCAAACGCAAACAGCTCAGAGTGGTTATTATAAATTTGATTTTGGATTTCTGAGTGGTTTTCGTTATGTTCCTTCAGATTTTATGTATGGATCTTATCATCCTAAGTGTAGTTTTAGACCTGAGACTATTAATAATGGTTTGTGGTTTAACTACTTGTCTGTTTCACTTACTTATGGACCCCTTCAAGGTGGTTGTAAGCAAGCAGTTTTTAATGGTAAGGCAACTTGTTGTTATGCTTACTCATATAGTGGTCAACGCTCGTGTAATGGCGTTTACAGTGGTGAACTACAACAACACTTTGAATGTGGTTTGTTAATTTATGTTACTAAGAGTGATGGCTCTCGTATACAAACAGCAACAGAACCACTTACGTTAACTCAACACAACTATAATAATATTACCTTAGATAAGTGTGTTGAGTATAATATATATGGCAGAGTTGGGCAAGGTTTTATTACTAATATAACTGACTCAGTTGCTGCTTATAATTATCTAGCAGATTCTGGTTTAGCCATTTTAGATACATCAGGTGCCATAGACATCTTCCGTGCAGAAGGTGAGTATGGACTTAATTACTACAAAGTTAACCCCTGTGGTGATGTTAACCAACAGTTTGTAGTGTCTGGTGGCAACTTAGTTGGCATTCTTACATCTTATAATGAAACAGGTTCTGAATCTATTGAGAACCAGTTTTATATTAAACTCACTAACGGAACACGTCGCTCTAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
;
END;

BEGIN TREES;
	Title IBV_HVR1_and_2;
	LINK Taxa = Taxa;
	TRANSLATE
[0] 		1 Infectious_bronchitis_virus_H120,
[1] 		2 Infectious_bronchitis_virus_M41,
[2] 		3 Infectious_bronchitis_virus_Ma5,
[3] 		4 'Infectious bronchitis virus 4_91',
[4] 		5 Infectious_bronchitis_virus_Italy02,
[5] 		6 Infectious_bronchitis_virus_QX,
[6] 		7 'Infectious bronchitis virus IBV-CU2-SP1',
[7] 		8 'Infectious bronchitis virus EG_12120s_2012',
[8] 		9 'Infectious bronchitis virus Eg_1265B_2012',
[9] 		10 'Infectious bronchitis virus Eg_CLEVB-2_IBV_012',
[10] 		11 'Infectious bronchitis virus Mans-1',
[11] 		12 'Infectious bronchitis virus Egypt_D_89',
[12] 		13 'Infectious bronchitis virus Moroccan-G_83',
[13] 		14 'Infectious bronchitis virus IBV_morocco_30',
[14] 		15 'Infectious bronchitis virus IBV_morocco_38',
[15] 		16 'Infectious bronchitis virus IBV_Morocco_01',
[16] 		17 'Infectious bronchitis virus Algeria_26_b3',
[17] 		18 'Infectious bronchitis virus Algeria_26_b2',
[18] 		19 'Infectious bronchitis virus Algeria_26_b1',
[19] 		20 'Infectious bronchitis virus Tunisia_TN296_07',
[20] 		21 'Infectious bronchitis virus Tunisia_TN556_07',
[21] 		22 'Infectious bronchitis virus TN335_01',
[22] 		23 'Infectious bronchitis virus TN200_01',
[23] 		24 'Infectious bronchitis virus TN200_00',
[24] 		25 'Infectious bronchitis virus NGA_293_2006',
[25] 		26 'Infectious bronchitis virus NGA_A116E7_2006';
	TREE Fig._1 = (((((((18:0.00401023,19:0.0068064)0.6100:0.00157943,17:0.00381506)1.0000:0.10938359,26:0.15583172)0.2600:0.00781959,(6:0.14800176,(4:0.05098292,13:0.07800938)1.0000:0.09158962)0.5700:0.02032894)0.1710:0.00678946,(25:0.06035548,(2:0.01631936,3:0.01383122)1.0000:0.09138007)0.7700:0.05297675)0.7120:0.03760313,(((10:0.00274496,11:0.00534137)0.7670:0.00780892,9:0.0196586)1.0000:0.05928059,((1:0.00851962,12:0.0077468)1.0000:0.03014736,(7:0.00072031,8:0.00736602)1.0000:0.05382168)0.9860:0.03280306)0.8130:0.0335929)0.6430:0.00374264,((((14:0.01057519,15:0.00570805)0.8550:0.00932125,16:0.01552546)0.9970:0.02163159,5:0.06611783)0.9980:0.04541838,(24:0.14359199,((20:0.08004004,21:0.03911259)1.0000:0.05078229,(22:0.00557621,23:0.01077402)1.0000:0.06688656)1.0000:0.08766076)0.5950:0.01177078)0.6430:0.00780931);
END;