#NEXUS [written Tue Dec 22 11:45:52 CET 2015 by Mesquite version 3.02 (build 681) at WSJESUSVIELBA/10.102.2.20] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=26; TAXLABELS Coffea_canephora Physcomitrella_patens Theobroma_cacao Capsicum_chinense Dimocarpus_longan Arabidopsis_thaliana Amborella_trichopoda Phoenix_dactylifera Oryza_sativa Elaeis_guineensis Malus_domestica Castanea_sativa Solanum_tuberosum Nicotiana_sylvestris Eucalyptus_grandis Medicago_truncatula Populus_trichocarpa Citrus_clementina Pyrus_bretschneideri Prunus_persica Morus_notabilis Gossypium_arboreum Jatropha_curcas Cicer_arietinum Glycine_max Vitis_vinifera ; END; BEGIN TREES; Title Imported_trees; LINK Taxa = Taxa; TRANSLATE [0] 1 Coffea_canephora, [1] 2 Physcomitrella_patens, [2] 3 Theobroma_cacao, [3] 4 Capsicum_chinense, [4] 5 Dimocarpus_longan, [5] 6 Arabidopsis_thaliana, [6] 7 Amborella_trichopoda, [7] 8 Phoenix_dactylifera, [8] 9 Oryza_sativa, [9] 10 Elaeis_guineensis, [10] 11 Malus_domestica, [11] 12 Castanea_sativa, [12] 13 Solanum_tuberosum, [13] 14 Nicotiana_sylvestris, [14] 15 Eucalyptus_grandis, [15] 16 Medicago_truncatula, [16] 17 Populus_trichocarpa, [17] 18 Citrus_clementina, [18] 19 Pyrus_bretschneideri, [19] 20 Prunus_persica, [20] 21 Morus_notabilis, [21] 22 Gossypium_arboreum, [22] 23 Jatropha_curcas, [23] 24 Cicer_arietinum, [24] 25 Glycine_max, [25] 26 Vitis_vinifera; TREE Imported_tree_1 = (1:0.46416,2:2.09707,(3:0.054234,4:0.0966185,(5:0.0806944,((6:0.0954977,7:0.271711):0.0376079,(8:0.0970277,(9:0.15565,10:0.103768):0.0440876):0.0768837):0.0269513):0.0197771,11:0.109319,((12:0.0988717,(((13:0.116341,14:0.0610458):0.0411683,15:0.120621):0.0195094,(16:0.113596,17:0.11135):0.0276101):0.0155078,18:0.11359):0.00875398,((19:0.0683085,20:0.0278219):0.0487245,21:0.113936):0.0257634,(22:0.0970575,23:0.0894565):0.0235448):0.0491252,((24:0.0509156,25:0.0675713):0.0440146,26:0.0714799):0.00958628):0.247402); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1450781152633; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5829979124947141221; endTell; getWindow; tell It; suppress; setResourcesState false false 152; setPopoutState 400; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1065 660; setLocation 163 241; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #5829979124947141221 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; toggleUseWeights off; endTell; setAssignedID 888.1450780350258.1148268965971310728; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 913 588; setLocation 163 241; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.trees.BasicTreeWindowMaker.BasicTreeWindow.arrow; endTell; setActive; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientRight; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals off; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 2; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '(((3:0.054234,4:0.0966185,(26:0.0714799,(25:0.0675713,24:0.0509156):0.0440146):0.00958628,11:0.109319,((22:0.0970575,23:0.0894565):0.0235448,((19:0.0683085,20:0.0278219):0.0487245,21:0.113936):0.0257634,(12:0.0988717,18:0.11359,(((13:0.116341,14:0.0610458):0.0411683,15:0.120621):0.0195094,(17:0.11135,16:0.113596):0.0276101):0.0155078):0.00875398):0.0491252,(5:0.0806944,((8:0.0970277,(10:0.103768,9:0.15565):0.0440876):0.0768837,(6:0.0954977,7:0.271711):0.0376079):0.0269513):0.0197771):0.247402,1:0.46416):1.048535,2:1.048535);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; setDigits 4; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;