#NEXUS [written Mon Oct 31 10:47:21 CET 2016 by Mesquite version 3.04 (build 725) at mdk-crou-006.cbs-niob.local/10.136.73.120] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=15; TAXLABELS Aplosporella_hesperidica_CBS_732.79 Saccharata_capensis_CBS_122693 Saccharata_hawaiiensis_CBS_111787 Saccharata_hawaiiensis_CBS_114570 Saccharata_intermedia_CBS_125546 Saccharata_kirstenboschensis_CBS_123537 Saccharata_proteae_CBS_115206 Saccharata_proteae_CBS_115384 Saccharata_proteae_CBS_115490 Saccharata_proteae_CBS_115498 Saccharata_proteae_CBS_119218 Saccharata_proteae_CBS_121406 Saccharata_proteae_CBS_121410 Saccharata_sp._1_CBS_114569 Saccharata_sp._2_CBS_122694 ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=1624; FORMAT DATATYPE = DNA GAP = - MISSING = ?; MATRIX Aplosporella_hesperidica_CBS_732.79 TCGAGAAGTTCGAGAAGGTCAGTATTTTCCCATGGCGGGG---CCCTTGGTGGGGTCCTTTTG---------------------------------------------CGCTAAGCCTCGCTCG-GCTCGGCTAC--------ACCCACCACCATTTTGCGACCGTCGCTGACCCCGCTCCAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAGCGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACCCCGAAGTACTATGTCACCGTCATTGACG?????TGGCTCAGGGAGGTCGGCAACGACCACCCAGAGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTACCGAGTTCTGGGTTCTCTCATCGAGGCCCGCTCTCCCACCCTTTGTGAACTTGACCTCTGTTGCTTTGGCGTGGCCAGCGCTGTAAAAAGC-GCGGCCGGCGGGGCCTGGCCC-CCGCTGGCAAGCT----TGCCCGCCAGAGGACTATC---AAACTCTTGTCAG-TAAACGATGCAGTCTGATCAAACATTTAATTGTTTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCTATGGTATTCCGTAGGGCATGCCTGTTCGAGCGTCATTACACACCTCAAGCTCTGCTTGGTATTGGGCGTCGTCCCCTAAACGGACGTGCCTCAAAGACCTCGGCGGTGGCGTCTTTGCCTCAAGCGTAGTAATACTTTTATCTCGCTTTGGAGTCGAAGGCGTCGCCCGCCGGACGAAACCTTTATTATTTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGTCTTGATCGACTTGCTCGGCTCAGGCTTGACACGCTTGTGGGGATCTCTGTCC---------------------------------------------------------------TCGTCATCTTCCTCTTCCTTGGGCTGTCC------------GGTCCGGATTCGGTGGTGCTCCTCCAAATCCTCTGGTGTCATGACAATCATGGCCGTTTCTTCCTCTTCGGCATCCATGTATTCGACCACGCCAGAACGCAGCAGTCCGTTCCAGCCAAACCTTGCATTCTCGCGTTCTTCATCGTCCATACCAGAAATATCAATGTCCCTGTCATCGACGAGTTTTTGAACGTGCTCCCTGCTCAGAGTCAGGTTGCCCTTGTTAGGACTCTTCGGGTCGTCGTCAACAATGAACAACGGCCTTTGCACACGCCCAGCATCCGTGAAGATCTTGAATTCACGGTCACGGACATCTCGGATCAAACTCATTTCTGCGGATAGGGTGCCGTCTCTGCGCAGGCTGCGAACGACCGACACGAGTTGCGTCGGGTCGCGGTGCACACCAACCCAGACACCGTTGATAAAAATCTTGGTGGCATTAGGGGTGACTGCAGGGTCAAACTCCTC Saccharata_capensis_CBS_122693 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACACTAGTCTCCTTTCGGGGCTCGGC-AAACCACCATGAGCGCTGCCCGTCCCGCGTGCACG-CCCCGAAACTGCTTCACGCCTTGGGC--------CTCTATTC-------ACGATGCTGACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTTTACA--AACCACGTTGCTTCGGCG-------------GGCAGCC-GGGTTCCGCCCCGCGCGGTCC-----CGGG-----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG-CTCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCTCCTCCCGCCGGACGAACCTTTTTAC-TTTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGGTTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTATCCTTGGTCCTTTCGATTTCTTCCTCTCGCCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCGTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTCTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGATCCACGTTGAAGACGAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATCTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCGGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAAATCTTCGTGGCATGCGGGTACCGCACCGGATCGTATTCCTC Saccharata_hawaiiensis_CBS_111787 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCTCG-CCCCGACACTGCTTCATGTCTTGGTCCTCTCTCTCTCTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTTCCCCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTATTCTTGATCCCTTCGATTTCTTTCTCTCGCCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCGTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCCCGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACGAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATCTTGAATTCTCTATCACGAACATCACGGACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAAATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_hawaiiensis_CBS_114570 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCTCG-CCCCGACACTGCTTCATGTCTTGGTCCTCTCTCTCTCTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTTCCCCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTATTCTTGATCCCTTCGATTTCTTTCTCTCGCCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCGTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCCCGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACGAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATCTTGAATTCTCTATCACGAACATCACGGACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAAATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_intermedia_CBS_125546 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGCAAAAACACCATGAGCTCTGCCCGCCCTGCGTGCACGCCCCCGACACTGCTTCATGCCTTGGWC--------CTCTGCTC-------ACTATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATCGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCCGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCC-GGGTCCCGCCCCGCGGGGTCC----CCGGGTC---ACACCGCCCGCCGGAGGATTACCACAAAACCCTTGCTTC-GAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGTATTCCGGGGGGCATGCCTGTTCGAGCGTCATTACACCACTCAAGCACCGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGCCGTAGCCTCAAGCGTAGTAAT---TCTCTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTAC-TTTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGAGGGTTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTATCCTTGGTCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCATCCTCTTCTGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACGATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCATAGAGTGTCTTGTCACGATCTTCCTCGTCCATACCAGCGGTATCGATGCTCTTGTCTTTTTCCAATTTCTCGATGTGGTCCACGTTGAAGACGAGGTTTCCTTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAATAAGGGACGCTGGACGCGACCCGCATCCGTGAAGATTTTGAATTCTCTATCACGAACGTCACGAACCAGACTGAGCTCGGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACTTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAAATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_kirstenboschensis_CBS_123537 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGCTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCAACACTGCTTCATGTCTTAGTC--------CTCTGTTC-------ACAATGCTAA-----CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCC-GGGGTCCGCCTCGCGCGGTTC-----CGGGT-----CACTGCCCGCCGGAGGATTACCAC-AAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGCCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTAC-TTTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGGTTAGGCTTCTGCTTCACACGCCTGTGAGGATCCTTGTCTATCCTTGGTCCTTTCGATTTCTTCCTCTCGCCCTCTTCGTCATCCATAG---CAATGTCGACACCGTCATCGTATTCGTCTTCGTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCCGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTCTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGATCCACGTTGAAGACGAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCGTCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATCTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCGGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGCACACCAACCCAGACGCCGTTGATGAAAATCTTCGTGGCATGCGGGTATCGCACCGGATCGTATTCCTC Saccharata_proteae_CBS_115206 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGGTC--------CTCTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-GAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTGACCCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCATCCTCCTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACCCCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACAAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTATCGCACTGGATCGTATTCCTC Saccharata_proteae_CBS_115384 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGGTC----------CTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACCGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-GAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCATCCTCCTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGACACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACAAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_proteae_CBS_115490 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGG--------------CCCTC---TCAACGACGCTGACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCAT-GACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCGTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCAATACTCTTGTCTTTCTCCAGTTTCTCGATGTGATCCACGTTGAAGACGAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_proteae_CBS_115498 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGGTC----------CTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-GAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCATCCTCCTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACAAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_proteae_CBS_119218 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGGTC----------CTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCATCCTCCTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACAAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAATGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_proteae_CBS_121406 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGGTC--------CTCTCTCTC---TCAaCGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCAT-GACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTTAAAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGG-TGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCATCCTCCTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACAAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_proteae_CBS_121410 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCACG-CCCCGACACTGCTTCATGTCTTGGTC--------CTCTCTCTC---TCAACGATGCTAA-----CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTT--CCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTACTCTTGATCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCATCCTCCTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCACGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACAAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATTTTGAATTCTCTATCACGAACATCACGAACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAGATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_sp._1_CBS_114569 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAAACACCATGAGCTCTGCCCGCCCCGCGTGCTCG-CCCCGACACTGCTTCATGTCTTGGTC----CTCTCTCTCTCTC---TCAACGATGCTAACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCTGGGTCCT----TCGGGGCCCGTCCTCCAACCCTTTGTCTACA--AACCACGTTGCTTCGGCG-------------GGCAGCCGGGGGTCCGCCCCGCGCGGCTTCCCCCCGGGT----CCACTGCCCGCCGGAGGATTACCACAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTTGGTATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG--TCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCGTCTCCCGCCGGACGAACCTTTTTACCATTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGGGGATTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTATTCTGGATCCCTTCGATTTCTTTCTCTCGCCCTCTTCATCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCGTCCTCTTCCGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACAATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCGTAGAGTGTTTTGTCCCGATCTTCCTCATCCATACCAGCGGTATCGATACTCTTGTCTTTCTCCAATTTCTCGATGTGGTCCACGTTGAAGACGAGGTTTCCCTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAACAAGGGACGCTGGACGCGACCCGCATCGGTGAAGATCTTGAATTCTCTATCACGAACATCACGGACCAGACTGAGCTCAGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACCTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAAATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC Saccharata_sp._2_CBS_122694 TTTCGCCTCTCGCACCGG---AGGGGCAGTGTTGGTGGGGTTTCGCACGCTAGTCTCATTTCGGGGCTCGGC-AAACCACCATGAGCTCTGCCCGCCTCGCGTGCACC-CCCCGGAACTGCTTCACGCCTTCGTC--------CTCTGTTC-------ACGATGCTGACT---CTCGCCACAGGAAGCCGCCGAGCTCGGCAAGGGTTCCTTCAAGTACGCCTGGGTCCTCGACAAGCTGAAGGCTGAGCGTGAACGTGGTATCACCATCGACATTGCTCTCTGGAAGTTCGAGACTCCCAAGTACTATGTCACCGTCATTGACG?????TGGCCCAGAGAGGTCGGCAACGACCGCTCAGGGCCGGAAAGTTCGTCAAACTTGGTCATTTAGAGGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTAACGAGTTCCGGGCCCT----TCGGGGCCCGTCCTCCAACCCTTTGTTTACA--AACCACGTTGCTTCGGCG-------------GGCAGCC-GGGGTCCGCCTCGCGCGGACC-----CGGGT-----CACTGCCCGCCGGAGGATCACCGAAAAACCCTTGCTTT-AAAACAATGCAGTCTGACCGAATATCAAATATTCTAAAACTTTCAACAACGGATCTCTTGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACATTGCGCCCCTCGGCATTCCGAGGGGCATGCCTGTTCGAGCGTCATTACACCCCTCAAGCACTGCTTGGTATTGGGCCCCG-CTCCTCACCGGGCGGGCCTTAAAGACCTCGGCGGCGGCGTCGTAGCCTCAAGCGTAGTAAT---TCTTTCTCGCTTTGGAGGCCGCGGCTCCTCCCGCCGGACGAACCTTTTTAC-TTTCTATCAAGGTTGACCTCGGATC?????TGCGTGTAGGACTTGATGAGAGGGTTCGGCTTCTGCTTCACACGCCTGTGAGGGTCCTTGTCTATCCTTGGTCCCTTCGATTTCTTCCTCTCACCCTCTTCGTCATCCATAGCTCCAATGTCAACACCGTCATCGTATTCGTCCTCATCCTCTTCTGGTTCAGTCAGAGTACTGGCACGATGGTGATCCTCCAGGTCGTCCGGGGTCATGACGATCATGGCTGTTTCTTCCTCTTCTGCGTCAAGGTACTCAACGACACCGTCTGAGAGCAGGCCATTCCAGCCATAGAGTGTCTTGTCACGATCTTCCTCGTCCATACCAGCGGTATCGATGCTCTTGTCTTTTTCCAATTTCTCGATGTGGTCCACGTTGAAGACGAGGTTTCCTTTGTTCGGGCTGTTGGGGTTGTCATCAATGACGAATAAGGGACGCTGGACGCGACCCGCATCCGTGAAGATTTTGAATTCTCTATCACGAACGTCACGAACCAGACTGAGCTCGGGCGTGAGCGTGCCATCTCTACGGAGGCTTCGGACAACTTGGACTAGCTGAGTAGGATCGTGATGTACACCAACCCAGACTCCGTTGATGAAAATCTTCGTGGCATGCGGGTACCGCACTGGATCGTATTCCTC ; END; BEGIN ASSUMPTIONS; TYPESET * UNTITLED = unord: 1 - 1624; END; BEGIN PAUP; LOG start = yes append = yes; set autoclose = yes warnreset = no torder = right; OUTGROUP outgroups / only; exclude 1 - . / only; include allsix / only; SET CRITERION = parsimony maxtrees = 1000 increase = no storebrlens = yes outroot = paraphyl; Pset gapmode = newstate; HSEARCH ADDSEQ = random NREPS = 100 SWAP = TBR; Savetrees format = nexus brlens = yes maxdecimals = 0 file = Sandraparsimony.trees; PSCORES 1 / TL = yes CI = yes RI = yes RC = yes HI = yes; Contree ALL / strict = yes treefile = Sandraparsimonycons.tre; Bootstrap nreps = 1000 search = heuristic; Savetrees from = 1 to = 1 format = nexus brlens = yes savebootp = nodelabels maxdecimals = 0 file = Sandraparsimonybootstrap.tre; Log stop = yes; END; BEGIN SETS; CHARSET TEF1 = 1 - 325; CHARSET ITS = 331 - 984; CHARSET RPB2 = 990 - 1624; TAXSET outgroups = 1; END; BEGIN CODONS; CODESET * UNTITLED = universal: 1 - 1624; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Jukes-Cantor': 1 - 1624; END; BEGIN TREES; Title 'Trees from "Sandraparsimony.trees"'; LINK Taxa = Taxa; TRANSLATE [0] 1 Aplosporella_hesperidica_CBS_732.79, [1] 2 Saccharata_capensis_CBS_122693, [2] 3 Saccharata_hawaiiensis_CBS_111787, [3] 4 Saccharata_hawaiiensis_CBS_114570, [4] 5 Saccharata_intermedia_CBS_125546, [5] 6 Saccharata_kirstenboschensis_CBS_123537, [6] 7 Saccharata_proteae_CBS_115206, [7] 8 Saccharata_proteae_CBS_115384, [8] 9 Saccharata_proteae_CBS_115490, [9] 10 Saccharata_proteae_CBS_115498, [10] 11 Saccharata_proteae_CBS_119218, [11] 12 Saccharata_proteae_CBS_121406, [12] 13 Saccharata_proteae_CBS_121410, [13] 14 Saccharata_sp._1_CBS_114569, [14] 15 Saccharata_sp._2_CBS_122694; TREE Fig._7 = ((((((14:14,(3:0.0,4:0.0):16):26,((((10:0.0,8:2):1,11:1):0.0,(7:6,13:2,12:3):2):4,9:10):29):7,(15:16,5:23):21):23,2:30):471,6:496):0.0,1:0.0); END; BEGIN TREES; Title 'Trees from "saccharata_3genes.nex.con.tre"'; LINK Taxa = Taxa; TRANSLATE [0] 1 Aplosporella_hesperidica_CBS_732.79, [1] 2 Saccharata_capensis_CBS_122693, [2] 3 Saccharata_hawaiiensis_CBS_111787, [3] 4 Saccharata_hawaiiensis_CBS_114570, [4] 5 Saccharata_intermedia_CBS_125546, [5] 6 Saccharata_kirstenboschensis_CBS_123537, [6] 7 Saccharata_proteae_CBS_115206, [7] 8 Saccharata_proteae_CBS_115384, [8] 9 Saccharata_proteae_CBS_115490, [9] 10 Saccharata_proteae_CBS_115498, [10] 11 Saccharata_proteae_CBS_119218, [11] 12 Saccharata_proteae_CBS_121406, [12] 13 Saccharata_proteae_CBS_121410, [13] 14 Saccharata_sp._1_CBS_114569, [14] 15 Saccharata_sp._2_CBS_122694; TREE Fig._7_Unpublished_Bayesian_tree = (1:0.643372,6:0.008974,(((14:0.00202,3:0.000722,4:0.000725)0.99:0.003629,(((10:0.000715,8:0.002065,7:0.004058)0.98:0.001334,11:0.001405,13:0.000733,12:0.000729)0.99:0.00272,9:0.004703)0.98:0.003137)0.95:0.00914,2:0.010613,(15:0.01294,5:0.012169)0.95:0.013131)0.50:0.007076); END; BEGIN TREES; Title Imported_trees; LINK Taxa = Taxa; TRANSLATE [0] 1 Aplosporella_hesperidica_CBS_732.79, [1] 2 Saccharata_capensis_CBS_122693, [2] 3 Saccharata_hawaiiensis_CBS_111787, [3] 4 Saccharata_hawaiiensis_CBS_114570, [4] 5 Saccharata_intermedia_CBS_125546, [5] 6 Saccharata_kirstenboschensis_CBS_123537, [6] 7 Saccharata_proteae_CBS_115206, [7] 8 Saccharata_proteae_CBS_115384, [8] 9 Saccharata_proteae_CBS_115490, [9] 10 Saccharata_proteae_CBS_115498, [10] 11 Saccharata_proteae_CBS_119218, [11] 12 Saccharata_proteae_CBS_121406, [12] 13 Saccharata_proteae_CBS_121410, [13] 14 Saccharata_sp._1_CBS_114569, [14] 15 Saccharata_sp._2_CBS_122694; TREE Fig._7_Unpublished_RAxML_tree = ((((3:0.00000214449144395036,4:0.00000214449144395036)89:0.00000214449144395036,14:0.008774092599593912)100:0.012568819687506342,((15:0.00000214449144395036,5:0.00000214449144395036)100:0.04443649461612655,((6:0.00000214449144395036,2:0.00000214449144395036)98:0.00000214449144395036,1:2.936515694008094)40:0.04257622895429951)53:0.013293438814000615)78:0.00812438802101243,(7:0.008624699476285044,(((10:0.00000214449144395036,12:0.00000214449144395036)32:0.00000214449144395036,13:0.00000214449144395036)62:0.00000214449144395036,(8:0.002843147925372825,11:0.005728170079094477)18:0.00000214449144395036)47:0.00000214449144395036)83:0.00886990949215177,9:0.011546704548459234); END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1477907241652; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 6271188824514726362; tell It; setSelected 1 - 15; setDefaultOrder 14 10 1 2 13 12 6 4 8 3 5 9 7 0 11; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 3433236305041309425; mqVersion 304; checksumv 0 3 2217761313 null getNumChars 1624 numChars 1624 getNumTaxa 15 numTaxa 15 short true bits 3458764513820540943 states 15 sumSquaresStatesOnly 503647.0 sumSquares 6.9175290276411218E18 longCompressibleToShort false usingShortMatrix true NumFiles 1 NumMatrices 1; mqVersion; endTell; getWindow; tell It; suppress; setResourcesState false false 411; setPopoutState 300; setExplanationSize 0; setAnnotationSize 0; setFontIncAnnot 0; setFontIncExp 0; setSize 1614 608; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; desuppress; endTell; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; showTaxa #6271188824514726362 #mesquite.lists.TaxonList.TaxonList; tell It; setTaxa #6271188824514726362; getWindow; tell It; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; getTable; tell It; rowNamesWidth 537; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1203 536; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.arrow; endTell; setActive; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #3433236305041309425 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 1203 536; setLocation 8 23; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.arrow; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges off; toggleSeparateLines off; toggleShowStates on; toggleAutoWCharNames off; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize off; toggleColorsPanel off; toggleLinkedScrolling on; toggleScrollLinkedTables off; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.align.AlignToDropped.AlignToDropped; tell It; gapCosts 8 3 2 2; subCosts 10 5 10 10 10 5 5 10 10 10 5 10; endTell; getEmployee #mesquite.molec.ColorByAA.ColorByAA; tell It; emphasizeDegeneracy off; endTell; getEmployee #mesquite.molec.SequenceInfoEditor.SequenceInfoEditor; tell It; panelOpen false; endTell; endTell; endTell; endTell; end;