#NEXUS [ ============= Summary Trees ============= Summary trees generated by SumTrees. Summarization Information ------------------------- Trees read from 10 source(s): - 'EF_Multi_01.tre' - 'EF_Multi_02.tre' - 'EF_Multi_03.tre' - 'EF_Multi_04.tre' - 'EF_Multi_05.tre' - 'EF_Multi_06.tre' - 'EF_Multi_07.tre' - 'EF_Multi_08.tre' - 'EF_Multi_09.tre' - 'EF_Multi_10.tre' 25 initial trees discarded/ignored as burn-in from *each* source Total of 750 trees analyzed for summarization: - All trees were treated as unweighted - All trees were treated as rooted - 35 unique taxa across all trees - 199 unique splits out of a total of 38401 splits - 163 unique non-trivial splits counted out of a total of non-trivial 11401 splits Summarized onto consensus tree with minimum clade frequency threshold of 0.5: - Support values expressed as percentages - Edge lengths on target trees set to mean of edge lengths in sources - Support and other summarization annotations added to target trees as metadata - Target tree(s) rerooted using outgroup: 'Fusarium_oxysporum_NRRL22902' Program Information ------------------- SumTrees 4.4.0 by Jeet Sukumaran and Mark T. Holder DendroPy version : DendroPy 4.4.0 () DendroPy location : C:\Python3\lib\site-packages\dendropy Python version : 3.7.4 (tags/v3.7.4:e09359112e, Jul 8 2019, 19:29:22) [MSC v.1916 32 bit (Intel)] Python executable : C:\Python3\python.exe Python site packages : ['C:\\Python3', 'C:\\Python3\\lib\\site-packages'] Execution Information --------------------- Executed on Dartagnan by desir@Dartagnan Working directory: 'C:\Users\desir\Documents\Google Drive\(2011-2018) - BioGeMM\(2016-2018) - Master\An�lise Filogen�tica\Fungal Planet\EF\Garli' Started at: 2019-10-21 17:38:17.864272 Ended at: 2019-10-21 17:38:27.938797 Total elapsed time: 10.074525 seconds Actual analysis time: 7.267753 seconds Citation Information -------------------- Sukumaran, J and MT Holder. 2010. DendroPy: a Python library for phylogenetic computing. Bioinformatics 26: 1569-1571. Sukumaran, J and MT Holder. SumTrees: Phylogenetic Tree Summarization. 4.4.0. Available at https://github.com/jeetsukumaran/DendroPy. ] BEGIN TAXA; DIMENSIONS NTAX=35; TAXLABELS Fusarium_agapanthi_NRRL54463 Fusarium_ananatum_CBS118516 Fusarium_anthophilum_NRRL13602 Fusarium_awaxy_ATCC38016 Fusarium_awaxy_LGMF1661 Fusarium_awaxy_LGMF1930 Fusarium_bactridioides_NRRL20476 Fusarium_begoniae_NRRL25300 Fusarium_bulbicola_NRRL13618 Fusarium_fracticaudum_CBS137234 Fusarium_guttiforme_MRC7539 Fusarium_konzum_CBS119849 Fusarium_marasasianum_CBS137238 Fusarium_mexicanum_NRRL53147 Fusarium_oxysporum_NRRL22902 Fusarium_parvisorum_CBS137236 Fusarium_pininemorale_CBS137240 Fusarium_sororula_CBS137242 Fusarium_sp_NRRL25195 Fusarium_sp_NRRL25204 Fusarium_sp_NRRL25346 Fusarium_sp_NRRL25807 Fusarium_sp_NRRL26756 Fusarium_sp_NRRL26757 Fusarium_sp_NRRL29124 Fusarium_sterilihyphosum_NRRL25623 Fusarium_subglutinans_MUCL52468 Fusarium_subglutinans_NRRL22016 Fusarium_subglutinans_NRRL53904 Fusarium_subglutinans_NRRL54158 Fusarium_succisae_NRRL13613 Fusarium_temperatum_MUCL52450 Fusarium_temperatum_NRRL25622 Fusarium_tupiense_NRRL53984 Fusarium_werrikimbe_CBS125535 ; END; BEGIN TREES; TREE 1 = [&R] (Fusarium_oxysporum_NRRL22902:0.06323239178666662[&support=100.0][&length_mean=0.06323239178666662,length_median=0.06313009,length_sd=0.011313042683564664,length_hpd95={0.04140025,0.08481361},length_quant_5_95={0.04505445,0.08237777},length_range={0.03246555,0.10702215}],Fusarium_agapanthi_NRRL54463:0.022478889386666638[&support=100.0][&length_mean=0.022478889386666638,length_median=0.02209532,length_sd=0.006893920315763353,length_hpd95={0.00946295,0.03555598},length_quant_5_95={0.0119066,0.03421306},length_range={0.00594059,0.04347451}],Fusarium_ananatum_CBS118516:0.007024086653333333[&support=100.0][&length_mean=0.007024086653333333,length_median=0.00656132,length_sd=0.0033969645940612274,length_hpd95={1e-08,0.01292466},length_quant_5_95={0.00156262,0.01291184},length_range={1e-08,0.01832284}],Fusarium_sp_NRRL29124:0.008491564493333334[&support=100.0][&length_mean=0.008491564493333334,length_median=0.00807202,length_sd=0.003991215661327386,length_hpd95={0.0014806,0.01663625},length_quant_5_95={0.00308041,0.01594116},length_range={1e-08,0.02245142}],(Fusarium_temperatum_MUCL52450:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_temperatum_NRRL25622:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}])100:0.021815155639999976[&support=100.0][&length_mean=0.021815155639999976,length_median=0.021687515,length_sd=0.006415529848371776,length_hpd95={0.00964298,0.03407774},length_quant_5_95={0.01158421,0.03240933},length_range={0.00502944,0.04247219}],(Fusarium_subglutinans_MUCL52468:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_subglutinans_NRRL22016:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_subglutinans_NRRL53904:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_subglutinans_NRRL54158:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}])100:0.012091708186666668[&support=100.0][&length_mean=0.012091708186666668,length_median=0.01132857,length_sd=0.0046732936171181546,length_hpd95={0.00303769,0.02087398},length_quant_5_95={0.00474888,0.02013924},length_range={0.00066468,0.02481776}],(Fusarium_begoniae_NRRL25300:0.0014353699466666727[&support=100.0][&length_mean=0.0014353699466666727,length_median=0.001560765,length_sd=0.0014070260515853237,length_hpd95={1e-08,0.00327415},length_quant_5_95={1e-08,0.00323636},length_range={1e-08,0.00635145}],Fusarium_guttiforme_MRC7539:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_sororula_CBS137242:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_sp_NRRL25204:0.003023930706666661[&support=100.0][&length_mean=0.003023930706666661,length_median=0.0031129649999999997,length_sd=0.0021708293712461814,length_hpd95={1e-08,0.00641168},length_quant_5_95={1e-08,0.00638968},length_range={1e-08,0.0111791}])83:0.0036450405600000017[&support=83.33333333333334][&length_mean=0.0036450405600000017,length_median=0.00314617,length_sd=0.0020051311166736758,length_hpd95={0.00151137,0.00790005},length_quant_5_95={0.00153937,0.00787599},length_range={0.00151137,0.00980182}],(Fusarium_awaxy_ATCC38016:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_awaxy_LGMF1661:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_awaxy_LGMF1930:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}])81:0.003973561933884293[&support=80.66666666666666][&length_mean=0.003973561933884293,length_median=0.00321921,length_sd=0.002193237109413317,length_hpd95={0.00120154,0.00825361},length_quant_5_95={0.00150194,0.00811809},length_range={0.00045785,0.01516202}],(Fusarium_pininemorale_CBS137240:0.0064275622799999845[&support=100.0][&length_mean=0.0064275622799999845,length_median=0.0063794049999999995,length_sd=0.003144960688922183,length_hpd95={0.00152486,0.01287236},length_quant_5_95={0.00158766,0.01148551},length_range={1e-08,0.01858998}],(Fusarium_marasasianum_CBS137238:0.00312267933333333[&support=100.0][&length_mean=0.00312267933333333,length_median=0.00312162,length_sd=0.0022895637013363008,length_hpd95={1e-08,0.00788072},length_quant_5_95={1e-08,0.00788072},length_range={1e-08,0.0115135}],(Fusarium_konzum_CBS119849:0.017691716653333304[&support=100.0][&length_mean=0.017691716653333304,length_median=0.01725804,length_sd=0.005977851777450525,length_hpd95={0.00496664,0.02799813},length_quant_5_95={0.00845869,0.02773998},length_range={0.00165244,0.04145502}],Fusarium_sp_NRRL25195:0.001552382520000003[&support=100.0][&length_mean=0.001552382520000003,length_median=0.0015600800000000001,length_sd=0.0016233987792457372,length_hpd95={1e-08,0.00472047},length_quant_5_95={1e-08,0.00470911},length_range={1e-08,0.01289055}],Fusarium_sp_NRRL25807:0.007873055720000006[&support=100.0][&length_mean=0.007873055720000006,length_median=0.007856515000000001,length_sd=0.003543971431506943,length_hpd95={0.00155325,0.01459504},length_quant_5_95={0.00309436,0.01445812},length_range={1e-08,0.02328707}],Fusarium_sterilihyphosum_NRRL25623:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_tupiense_NRRL53984:0.006554187400000002[&support=100.0][&length_mean=0.006554187400000002,length_median=0.00632276,length_sd=0.0034076698484867434,length_hpd95={1e-08,0.01285097},length_quant_5_95={0.00156382,0.01281193},length_range={1e-08,0.02139037}],(Fusarium_fracticaudum_CBS137234:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_parvisorum_CBS137236:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}])86:0.0037600523611111113[&support=86.4][&length_mean=0.0037600523611111113,length_median=0.0031744,length_sd=0.0021021986806318365,length_hpd95={0.00151652,0.00798722},length_quant_5_95={0.00154718,0.00796058},length_range={0.00151652,0.01125023}])96:0.006267081775312063[&support=96.13333333333334][&length_mean=0.006267081775312063,length_median=0.00633686,length_sd=0.002961468908012114,length_hpd95={0.00152168,0.01153741},length_quant_5_95={0.00159768,0.01153741},length_range={0.00144662,0.02267301}])59:0.002671801550561798[&support=59.333333333333336][&length_mean=0.002671801550561798,length_median=0.00165924,length_sd=0.001364236665927958,length_hpd95={0.00152971,0.00496006},length_quant_5_95={0.00155982,0.00493639},length_range={0.00151303,0.00853949}])67:0.0032471240881763556[&support=66.53333333333333][&length_mean=0.0032471240881763556,length_median=0.00314248,length_sd=0.0018461127721448693,length_hpd95={0.0008228,0.00648017},length_quant_5_95={0.00118478,0.00644136},length_range={0.00014148,0.01471862}],((Fusarium_bulbicola_NRRL13618:9.999999999999917e-09[&support=100.0][&length_mean=9.999999999999917e-09,length_median=1e-08,length_sd=8.610842338458107e-16,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_werrikimbe_CBS125535:0.004345085226666664[&support=100.0][&length_mean=0.004345085226666664,length_median=0.0048118150000000005,length_sd=0.0027891806553709893,length_hpd95={1e-08,0.00984169},length_quant_5_95={1e-08,0.00981365},length_range={1e-08,0.01407178}])62:0.0025252487366167024[&support=62.26666666666667][&length_mean=0.0025252487366167024,length_median=0.00159481,length_sd=0.0013311833363280586,length_hpd95={0.00152062,0.0048446},length_quant_5_95={0.00154476,0.00482387},length_range={0.00151732,0.00803063}],(Fusarium_anthophilum_NRRL13602:0.003246785666666662[&support=100.0][&length_mean=0.003246785666666662,length_median=0.00315432,length_sd=0.002227523735687055,length_hpd95={1e-08,0.00784413},length_quant_5_95={1e-08,0.00784413},length_range={1e-08,0.01162335}],Fusarium_bactridioides_NRRL20476:0.009794546346666657[&support=100.0][&length_mean=0.009794546346666657,length_median=0.009621505,length_sd=0.0038552913446844553,length_hpd95={0.00308769,0.0170108},length_quant_5_95={0.00471749,0.01662268},length_range={0.00156081,0.02328126}],Fusarium_succisae_NRRL13613:0.012342742613333341[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END;