#NEXUS [ ============= Summary Trees ============= Summary trees generated by SumTrees. Summarization Information ------------------------- Trees read from 10 source(s): - 'RPB2_Multi_01.tre' - 'RPB2_Multi_02.tre' - 'RPB2_Multi_03.tre' - 'RPB2_Multi_04.tre' - 'RPB2_Multi_05.tre' - 'RPB2_Multi_06.tre' - 'RPB2_Multi_07.tre' - 'RPB2_Multi_08.tre' - 'RPB2_Multi_09.tre' - 'RPB2_Multi_10.tre' 25 initial trees discarded/ignored as burn-in from *each* source Total of 250 trees analyzed for summarization: - All trees were treated as unweighted - All trees were treated as rooted - 16 unique taxa across all trees - 90 unique splits out of a total of 6550 splits - 73 unique non-trivial splits counted out of a total of non-trivial 2300 splits Summarized onto consensus tree with minimum clade frequency threshold of 0.5: - Support values expressed as percentages - Edge lengths on target trees set to mean of edge lengths in sources - Support and other summarization annotations added to target trees as metadata - Target tree(s) rerooted using outgroup: 'Fusarium_oxysporum_NRRL22902' Program Information ------------------- SumTrees 4.4.0 by Jeet Sukumaran and Mark T. Holder DendroPy version : DendroPy 4.4.0 () DendroPy location : C:\Python3\lib\site-packages\dendropy Python version : 3.7.4 (tags/v3.7.4:e09359112e, Jul 8 2019, 19:29:22) [MSC v.1916 32 bit (Intel)] Python executable : C:\Python3\python.exe Python site packages : ['C:\\Python3', 'C:\\Python3\\lib\\site-packages'] Execution Information --------------------- Executed on Dartagnan by desir@Dartagnan Working directory: 'C:\Users\desir\Documents\Google Drive\(2011-2018) - BioGeMM\(2016-2018) - Master\An�lise Filogen�tica\Fungal Planet\RPB2\Garli' Started at: 2019-10-21 17:54:18.525125 Ended at: 2019-10-21 17:54:23.325975 Total elapsed time: 4.80085 seconds Actual analysis time: 2.615418 seconds Citation Information -------------------- Sukumaran, J and MT Holder. 2010. DendroPy: a Python library for phylogenetic computing. Bioinformatics 26: 1569-1571. Sukumaran, J and MT Holder. SumTrees: Phylogenetic Tree Summarization. 4.4.0. Available at https://github.com/jeetsukumaran/DendroPy. ] BEGIN TAXA; DIMENSIONS NTAX=16; TAXLABELS Fusarium_agapanthi_NRRL54463 Fusarium_ananatum_CBS118516 Fusarium_anthophilum_NRRL13602 Fusarium_awaxy_LGMF1930 Fusarium_begoniae_NRRL25300 Fusarium_bulbicola_NRRL13618 Fusarium_fracticaudum_CBS137234 Fusarium_konzum_CBS119849 Fusarium_oxysporum_NRRL22902 Fusarium_parvisorum_CBS137236 Fusarium_sororula_CBS137242 Fusarium_subglutinans_NRRL22016 Fusarium_subglutinans_NRRL53904 Fusarium_subglutinans_NRRL54158 Fusarium_succisae_NRRL13613 Fusarium_temperatum_NRRL25622 ; END; BEGIN TREES; TREE 1 = [&R] (Fusarium_oxysporum_NRRL22902:0.04781926136000004[&support=100.0][&length_mean=0.04781926136000004,length_median=0.04530931,length_sd=0.013680484480767844,length_hpd95={0.02654888,0.07366567},length_quant_5_95={0.02817775,0.07343265},length_range={0.02535778,0.11954785}],Fusarium_agapanthi_NRRL54463:0.01886214492[&support=100.0][&length_mean=0.01886214492,length_median=0.016595640000000002,length_sd=0.008994728940267064,length_hpd95={0.00251356,0.03561418},length_quant_5_95={0.00680905,0.03561418},length_range={0.00251356,0.04818747}],(((Fusarium_parvisorum_CBS137236:0.0011032199999999985[&support=100.0][&length_mean=0.0011032199999999985,length_median=0.00118776,length_sd=0.0011314756806430927,length_hpd95={1e-08,0.00362391},length_quant_5_95={1e-08,0.00362391},length_range={1e-08,0.00490565}],Fusarium_sororula_CBS137242:9.999999999999946e-09[&support=100.0][&length_mean=9.999999999999946e-09,length_median=1e-08,length_sd=1.120077662373944e-15,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}])100:0.016003045159999996[&support=100.0][&length_mean=0.016003045159999996,length_median=0.01533433,length_sd=0.0048452802804009225,length_hpd95={0.00705393,0.02659528},length_quant_5_95={0.00870429,0.02447852},length_range={0.00470127,0.03097345}],(Fusarium_awaxy_LGMF1930:9.999999999999946e-09[&support=100.0][&length_mean=9.999999999999946e-09,length_median=1e-08,length_sd=1.120077662373944e-15,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_subglutinans_NRRL22016:9.999999999999946e-09[&support=100.0][&length_mean=9.999999999999946e-09,length_median=1e-08,length_sd=1.120077662373944e-15,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_subglutinans_NRRL53904:9.999999999999946e-09[&support=100.0][&length_mean=9.999999999999946e-09,length_median=1e-08,length_sd=1.120077662373944e-15,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_subglutinans_NRRL54158:9.999999999999946e-09[&support=100.0][&length_mean=9.999999999999946e-09,length_median=1e-08,length_sd=1.120077662373944e-15,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_temperatum_NRRL25622:0.003849249480000004[&support=100.0][&length_mean=0.003849249480000004,length_median=0.00306748,length_sd=0.0024538824988591724,length_hpd95={1e-08,0.00761177},length_quant_5_95={1e-08,0.00761177},length_range={1e-08,0.01339563}])100:0.009184926867469877[&support=99.6][&length_mean=0.009184926867469877,length_median=0.0089196,length_sd=0.0036513946810121907,length_hpd95={0.0035887,0.01597158},length_quant_5_95={0.00367685,0.01516204},length_range={0.00169104,0.02066234}],(Fusarium_bulbicola_NRRL13618:9.999999999999946e-09[&support=100.0][&length_mean=9.999999999999946e-09,length_median=1e-08,length_sd=1.120077662373944e-15,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,1e-08}],Fusarium_konzum_CBS119849:0.00419815428[&support=100.0][&length_mean=0.00419815428,length_median=0.0036813749999999998,length_sd=0.0022343321334820703,length_hpd95={0.00084617,0.00867435},length_quant_5_95={0.00117232,0.00846228},length_range={1e-08,0.01002453}])90:0.00637095620535714[&support=89.60000000000001][&length_mean=0.00637095620535714,length_median=0.005959925,length_sd=0.0032935470284166666,length_hpd95={0.00122176,0.01288583},length_quant_5_95={0.00158559,0.01265822},length_range={0.0008152,0.01653027}],(Fusarium_anthophilum_NRRL13602:1.4817359999999963e-05[&support=100.0][&length_mean=1.4817359999999963e-05,length_median=1e-08,length_sd=0.00013463005196686482,length_hpd95={1e-08,1e-08},length_quant_5_95={1e-08,1e-08},length_range={1e-08,0.00124038}],Fusarium_begoniae_NRRL25300:0.01026784552[&support=100.0][&length_mean=0.01026784552,length_median=0.01016349,length_sd=0.00419099399223013,length_hpd95={0.00353743,0.01849781},length_quant_5_95={0.00389554,0.0175775},length_range={1e-08,0.02515123}],Fusarium_succisae_NRRL13613:0.0024855764000000003[&support=100.0][&length_mean=0.0024855764000000003,length_median=0.002441455,length_sd=0.0019533234851045254,length_hpd95={1e-08,0.00636567},length_quant_5_95={1e-08,0.00636567},length_range={1e-08,0.00868136}])68:0.004677844411764704[&support=68.0][&length_mean=0.004677844411764704,length_median=0.0038674499999999997,length_sd=0.0024690070177594775,length_hpd95={0.00116392,0.00904178},length_quant_5_95={0.00120659,0.00891121},length_range={0.00101436,0.01159678}])59:0.005319804217687074[&support=58.8][&length_mean=0.005319804217687074,length_median=0.00514681,length_sd=0.0022345673099386544,length_hpd95={0.00235915,0.00988132},length_quant_5_95={0.00245714,0.00969293},length_range={0.00128895,0.01451401}],(Fusarium_ananatum_CBS118516:0.0027559942800000035[&support=100.0][&length_mean=0.0027559942800000035,length_median=0.00239748,length_sd=0.002399220862451762,length_hpd95={1e-08,0.00728234},length_quant_5_95={1e-08,0.00728234},length_range={1e-08,0.01276238}],Fusarium_fracticaudum_CBS137234:0.0009283868399999991[&support=100.0][&length_mean=0.0009283868399999991,length_median=1e-08,length_sd=0.001226517534040689,length_hpd95={1e-08,0.00361535},length_quant_5_95={1e-08,0.00361535},length_range={1e-08,0.00510931}])51:0.0038133636718749985[&support=51.2][&length_mean=0.0038133636718749985,length_median=0.003610635,length_sd=0.0020123097229091695,length_hpd95={0.00098713,0.0076841},length_quant_5_95={0.00103609,0.00753757},length_range={0.00091055,0.00921234}])73:0.012033294153005471[&support=73.2][&length_mean=0.012033294153005471,length_median=0.01118945,length_sd=0.004896301771932981,length_hpd95={0.00408165,0.0223694},length_quant_5_95={0.00485851,0.02088083},length_range={0.00227328,0.02725991}])100:0.0[&support=100.0][&length_mean=0.0,length_median=0.0,length_sd=0.0,length_hpd95={0,0},length_quant_5_95={0,0},length_range={0,0}]; END;