#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on June 13, 2026; 16:43 GMT

TreeBASE (cc) 1994-2008

Study reference:
Psurtseva N., Zmitrovich I., Malysheva V.F., Braun U., & Mel’nik V.A. 2016. Rogersiomyces
malaysianus (Cantharellales, Agaricomycetes): notes on taxonomy and developmental
morphology. Mycological Progress, .

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S18321]

[ The following blocks are input data for analysis step 17035 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep17035;
        DIMENSIONS NTAX=15;
        TAXLABELS
            'Auricularia auricula-judae KJ698425'
            Cantharellus_cibarius_KJ184345
            Ceratobasidium_cornigerum_EU273525
            Craterellus_cornucopioides_JF907967
            Cryptococcus_neoformans_FJ914894
            Filobasidium_capsuligenum_EF611232
            Haplotrichum_conspersum_DQ911612
            Hydnum_repandum_JX093561
            Rogersiomyces_malaysianus_KT779284
            Rogersiomyces_malaysianus_KT779285
            Sistotrema_confluens_KC862587
            Sistotrema_sernanderi_AY805624_
            Sistotremastrum_guttuliferum_JX310445
            Sporidiobolus_johnsonii_AF444509_
            Thanatephorus_cucumeris_EU244843
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M33680]

	TITLE Rogersiomyces_based_on_nrITS;
	LINK TAXA = TaxaForAnalysisStep17035;
	DIMENSIONS NCHAR=446;
	FORMAT DATATYPE=DNA SYMBOLS= "A C G T" MISSING=? GAP= -;

MATRIX
[                                                 10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440      ]
[                                                  .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .         .      ]
'Auricularia auricula-judae KJ698425'     TGGGGGTCTTCATTCAGCTGTCGCTTGCTGGACGAAAACTCACACCTGTGCACCTCGGTGCGGTTTCGGCCGCTTCCGCTTTAACTACAAGTCCAGAATGTGATCTAAAAAAGTAACAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCATGGAGCATGCCTGTTTGAGTGTCACGTAAACCCTCACCCGTCGCCCGC-------------GGTGGACTTGGACCGTGCCGT-AATCGGCTCGTCTTGAATGCATTAGCTGGCGCTTTTAAGTCTGGGCGA---CGGTGTGATAATTATCTCGCCAATAGGGGCCTTCAGCGGCGCTGCTTACAGCCGTCCCTGACAAA
Cantharellus_cibarius_KJ184345            CGTGCGCTCTTCTGGGGTCTCCGGTGGCCGTTCCAGTTCCCAGGCATGTCCAGTCCCCTGGGGCCTTGGCGGCTGCCCCGGCATTCCGGGGCCTCAAATGTCCAATGGTTTATAGATAACTCTCA?CAATGGATCTCTAGGCTCTTGCATCGATGAAGAACGCAGTGAACTGCGATAACTGGTGTGAATTGCAACACCAAGCGAATCATCGAGTCTTTGAACGCAAACGGCACCCTTCAGTGTGGCCAAGGGTATCTCTGGCTGAGGGTAATGGGAACTTGATCCAG------TGTAACCGTGGTTAGCTGGGGATTGGGCTTTGGGGTACTCTGGCTTGCCTTAAATGCATTGGCTGGCCCTTGACATAGTGCTTTTTTTCAGTCTAGCCAAAAGGCTGGTGAAGGACTTGGGCTGCGGCGCAGC-TCTGTTCGCGTCCGTCGCA
Ceratobasidium_cornigerum_EU273525        CGTAGGTGATCAAGAGGTTGCCCCTCGCCT-TCTCTTTTCCACACCTGTGCACTTTGAGACGGACTTTTCTTCCGTCTACTTACTCATTAATTATGAATGTGATGTAAATTAGAACTAAGTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCTTGGAGCATGCCTGTTTGAGTATCATGAAATTCTCAAAGTAAATCTTTTGTTCAATGGTTGCTTTGGACTTGGAGGTTGCAGATCGTCTGCTCCTCTTAAATGCATTAGCTGGATCTCAGTATGTTGGTTCCACTCGGCGTGATAAGTATCACGCTGAGGAAAGTGGCCAAGTACACCGCTTCTAATAGTCTATGACAAA
Craterellus_cornucopioides_JF907967       AAGGCTTGTTTGTCAGACTGTGAGTAAGTTGTTGGTCATTGAAAGCAATCCACTCTGGGGAGGGTTTGACTGTATTCTATCT-CTCTCTAGTCTCGAGTGTATCATAACTCATTTACAACTTTCAGCAATGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGTGAAATGCGATAACTGGTGTGAATTGCAACACCAAGTGAATCATCGAGTCTTTGAACGCA-ATTGCGCCCTCTGGTATTGGAGGGGGTACGTCTGTTCGAGGGTCATTTGAACCTCTCAAAGGGTTTTTGGCTTAA-AAACCCTTTGGATTTGGGTCTTGCCGTGTCTTGGCTCACCTTGAAAGCATTAGCAAGTCTTTTTGGAGGCGTTGTAATTTGGTCAGG------CCTCCTTGAGAGGATTCGTCTCAAAAATTGCTTCCAATGGCCCCTGGC---
Cryptococcus_neoformans_FJ914894          CGTAGGTGATCAGTAGAGAATGACTTATTTATCTACCCTCTACACCTGTGAACTGTTATGTGCTT----CGGCACGTTTTACAAACTTCAATGTTGAATGTATTATAACAATAATAAAACTTTCAACAACGGATCTCTTGGCTTCCACATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCAACTTGCGCCCTTTGGTATTCCGAAGGGCATGCCTGTTTGAGAGTCATGAAAATCTCAATCCCTCGGGTTTTATTACCGTTGGACTTGGATTTGGGTGTTGCCGCGCGTCGGCTCGCCTTAAATGTGTTAGTGGGAAGGTGATA---CCTGTCAGCCCGGCGTAATAAG--TTTCGCTGGGCCGGGTAGTCTTCCTTGCTG-------------ATAACAAA
Filobasidium_capsuligenum_EF611232        CACA----------------------------------TCCACACCTGTGAACTGTAAGATGTGTTTCGCGGCATCTGCCATAAACAATAATGTCAAATGTATTATAA--TCAATAAAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGAAAATATCAACCAAGACTTGGGTTTCTCTGTTCGGCTTGGAATTGGGTGCTGCAATCAGATGGCTCACCTTAAAAGAATTAGCTGGATCTGTTTAGATTGGTTTGACTTGGCGTAATAAGTATTTCGCTAAGGAGGATGGCCAATAACGCCGCTTCTAATCTTTCCTGACAAA
Haplotrichum_conspersum_DQ911612          GGTGTGCCGCCCCGCGCACGCCGCCTGCAGTCCAACCTCTCACACCCGTGCACACCGTCGGGCGCTCCGC-----CCCGACCTTCCACAAGCCACGAAAGTGCGCTTGCCGAAAAACAACTTTTAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCCGTTTGAGTGTCTCGATATCATCAGGCGCCCGTGCCCTTGCGGCGGTGCGACTGGACTTGGACGTTGCCGGGGCCCGGCTCGTCTTAAATGCATTAGCGAGAGACGCTATCTCCGGCTCTCATTGGCGTGATAAGGTCACCGTCGAGAGCGGTCACGAGCTGCGCCGCTTCTAACCGTCCCTGACGGA
Hydnum_repandum_JX093561                  CGTAGGTGATCAGGGGGTTGCCAGTTACTCTTCTGATTTTTACACCTGTGCACTTTTCAAAGAGGGTAGCTGCCTTTGGAACAACCCCCTGTATTGAATGTGCCACAATTTTAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCGCTCTCTGGTATTCCGGGGAGCACATCTGTTCGAGTGTCATGAAACTCTCAAATAAAGGTGGATTTTCTATCATCTGTTTGGATTTGGACTTTGCTGCAATGTGGCTAGTCTTAAATGTATTAGCTTGGTCCTCATGGTTTGGTTCTACTCGGCATGATAATTATCTTGTTGAGGAGACTGGCCATGTCTCTTGCTTCTAAATTGTCTTGACGAA
Rogersiomyces_malaysianus_KT779284        CATTAATGATTGCCAGCATGCCGTTCACAATTCTATCCTATACACCTGTGCACTCTGAAGGGGTCTCTGCTATCTCCTTCTTAAACTCTGATTTCGAATGCGCCGAAAATCTTATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGTGTCGTGAAGTCCTCAAGCCAGGATGGTTTTTGAACGTCCGGCTTGGATTTGGACTCTGGCTTGCAACGGCTGGTCTTAAAAGCATTAGCTGGTCCATGTTACTATGGTTCTACTCGGCGTGATAAGTCTCTCGCTGAGGAATGTAGATGGCCGTGCCGCTTCTAATCTTGCCTGGCAAA
Rogersiomyces_malaysianus_KT779285        CATTAATGATTGCTAGCATGCCGTTCACAATTCTATCCTATACACCTGTGCACTCTGAAGGGGTCT?TGCTATCTCCTTCTTAAACTCTGATTTCGAATGCGCCGAAAATCTTATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAATTGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGTGTCGTGAAGTCCTCAAGCCAGGATGGTTTTTGAACGTCCGGCTTGGATTTGGACTCTGGCTTGCAACGGCTGGTCTTAAAAGCATTAGCTGGTCCATGTTACTATGGTTCTACTCGGCGTGATAAGTCTCTCGCTGAGGAATGTAGATGGCCGTGCCGCTTCTAATCTTGCCTGGCAAA
Sistotrema_confluens_KC862587             CGTAGGTGATCATAGGGTTACGACTTAGCTTAATATTTTCTACACCTGTGCATTGTCTATCTAAA---------------ATAGATTTAGACGTCGAATGCCT--CAATATGTATACAACTTTTAACAACGGATCTCTTGGTTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAGGTAATGTGAATTGCAGAATTCAGTGAATCATCGAGTCTTTGAACGCACCTTGCGCTCCCTGGTACTCCGGGGAGCACGTCTGTTCGAGTGTCCTAAAGACCATCAGACATAGGTGCCACTTACC--TATGTCTGGAGCTGGACCTTGCTGT-AAATGGCTGGTCTGAAACACATTCGTGGGTACGTTATA---GCAGTCCTCCGGGCGTGATATCTAATCAACAACGAAAACTGTCTAACTGGACTGCTTCTAATG------GCTGAA
Sistotrema_sernanderi_AY805624_           TG----------------AGCTAATTGCTCTCTCATCCTTTACACCTGTGCACTTTGAGGGGACTTTTACTCCCCTTCAACTATACACTTATTACGAATGCGCTTAACTTTAAATACAACTTTTAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCCTGGTATTCCGGGGAGCACGCCTGTTCGAGCGTCATGAAGCTCTCAAATAGCCTCTTTTCTTGCAAGATGTGTTTGGATTTGGACTCTGCTGTGAAACAGCTGGTCCGAAAGATATTAGCTGATCC-TAGCAGATTGGTTCTACTCGGCGTGATAATTATCTCGTTGAGGAAGATGGCCAAAACTATTGCTTCTAATCGTCTTCGACGAA
Sistotremastrum_guttuliferum_JX310445     CAAAGTTGCTTACAGCGTTGTCGGTCAGGTAGCTCTTGTTCACCCCTGTGCACCTAGAGGGGAGCGCGTCGACGTTGCCCTCAAAATCTTGTCTAGAATGTCTGATAAAAACAAAATAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCGAGGAGCATGCCTGTTTGAGTGTCATGATAATCTCAAATCAACATTTTAGTTTAATTGTTGACTTGGACTTGGAGGTTGCTGATTATTGGCTCCTCTTAAATGCATTAGCTGGATTACTATAGTATAGTCCA---TGGTGTTGTAATCTCGGCGCTGTGACAACTATACAAT----CTGCTTCTAAAATTGCCTAATAAA
Sporidiobolus_johnsonii_AF444509_         CGTAGGTGATCATGAGGGTGTCAATTGACCTTCTCACTTCTAACCCTGTGCATCTTATGGTCTGCTTTGCGAGCCTTCACTTAAACACCAGTCTAGAATGTATATAATCTATATAAAAACTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATACGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCATCTTGCACTCTCTGGTATTCCGGAGAGTATGTCTGTTGGAGTGTCATGAATTCTTCAACCCCACCGTTTCTTGAAGCCGTGTGCTTGGATTCTGAGCGTGCTGATTATTAGCTCGTTCGTAATGCATTAGCATCCCGATGAAAGTTTGGATTGACTTGGCGTAATAGACTATTCGCTAAGGACACTAGCCAACTTCAAAGCTTCTAATCAAGTCTGATCAA
Thanatephorus_cucumeris_EU244843          GGTAGGTGATCAATAGGTTGCCTCATACCTATCTCTTTTCCACACCTGTGCACTTTGAGGCTTGTTTTAACTCTGTCTACTCACTCAATTATTTTGAATGGGATGTAATCTAATACTAAGTTTCAACAACGGATCTCTTGGCTCTCGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCATCGAATCTTTGAACGCACCTTGCGCTCCTTGGTATTCCTTGGAGCATGCCTGTTTGAGTATCATGAAATCTTCAAAGTAAATCTTTTGTTCAATGGTTACTTTGGTATTGGAGGTTGCAGCTCACCTGCTCCTCTT--GTTCATTAGCTGGATCTCAGTATGTTGGTTCCACTCAGCGTGATAAGTATCTCGCTGAGGAAGGTGGCCAAGTGCACCGCTTCTAATAGTCCATGAC--A
;
END;

[ The following blocks are output data for analysis step 17035 ]
BEGIN TREES;
      TITLE Rogersiomyces_based_on_nrITS;
      LINK TAXA = TaxaForAnalysisStep17035;
      TREE tree_1 = [&R] (Sporidiobolus_johnsonii_AF444509_:0.234911975,(Sistotremastrum_guttuliferum_JX310445:0.34313186,((Ceratobasidium_cornigerum_EU273525:0.03141858,Thanatephorus_cucumeris_EU244843:0.08905772):0.16540203,((Haplotrichum_conspersum_DQ911612:0.45319789,'Auricularia auricula-judae KJ698425':0.31731851):0.21588324,(((Filobasidium_capsuligenum_EF611232:0.16635274,Cryptococcus_neoformans_FJ914894:0.39005401):0.09075484,(Craterellus_cornucopioides_JF907967:0.51106681,Cantharellus_cibarius_KJ184345:1.1247718):0.59142723):0.03673715,((Rogersiomyces_malaysianus_KT779284:0.00267746,Rogersiomyces_malaysianus_KT779285:1.13E-6):0.27005864,(Sistotrema_confluens_KC862587:0.59634159,(Sistotrema_sernanderi_AY805624_:0.20391142,Hydnum_repandum_JX093561:0.25653717):0.06955697):7.101E-5):0.09684746):0.01187873):0.03399469):0.06335992):0.234911975);
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr90915]


END;