#NEXUS
[!This data set was downloaded from TreeBASE, a relational database of phylogenetic knowledge. TreeBASE has been supported by the NSF, Harvard University, Yale University, SDSC and UC Davis. Please do not remove this acknowledgment from the Nexus file.


Generated on June 13, 2026; 22:18 GMT

TreeBASE (cc) 1994-2008

Study reference:
Cannatella D., Hillis D.M., Chippindale P., Weight L., Rand A., & Ryan M. 1998. Phylogeny
of frogs of the Physalaemus pustulosus species group with an examination
of data incongruence. Systematic Biology, 47(2): 311-335.

TreeBASE Study URI:  http://purl.org/phylo/treebase/phylows/study/TB2:S394]

[ The following blocks are input data for analysis step 461 ]
BEGIN TAXA;
        TITLE  TaxaForAnalysisStep461;
        DIMENSIONS NTAX=10;
        TAXLABELS
            Physalaemus_caicai
            Physalaemus_cf._freibergi
            Physalaemus_coloradorum
            Physalaemus_enesefae
            Physalaemus_ephippifer
            Physalaemus_petersi
            Physalaemus_pustulatus
            Physalaemus_pustulosus
            Physalaemus_sp._A
            Physalaemus_sp._C
            ;
END;

BEGIN CHARACTERS;
[! TreeBASE Matrix URI: http://purl.org/phylo/treebase/phylows/matrix/TB2:M2085]

	TITLE Appendix_Allo;
	LINK TAXA = TaxaForAnalysisStep461;
	DIMENSIONS NCHAR=27;
	FORMAT DATATYPE=Standard SYMBOLS= "0 1 2 3 4 5 6 7 8 9" MISSING=? GAP= -;

MATRIX
[                                     10        20       ]
[                                      .         .       ]
Physalaemus_caicai            451441200071101525625127766
Physalaemus_cf._freibergi     221330002041101331413314433
Physalaemus_coloradorum       463322003061401623226138877
Physalaemus_enesefae          671251102171111726226221119
Physalaemus_ephippifer        21122010012111421?3?7242211
Physalaemus_petersi           221230102031105341413323322
Physalaemus_pustulatus        343321114060306324234336655
Physalaemus_pustulosus        531511101051207432121525544
Physalaemus_sp._A             13111010011111112?5?1101111
Physalaemus_sp._C             4423210000811018277?8429968
;
END;

BEGIN SETS;
	CHARSET POLYLOCI (CHARACTERS = Appendix_Allo) =  1-5 8 11 13 15-22 24-27;
	CHARSET monoloci (CHARACTERS = Appendix_Allo) =  6-7 9-10 12 14 23;
END;
[ The following blocks are output data for analysis step 461 ]
BEGIN TREES;
      TITLE Tb5241;
      LINK TAXA = TaxaForAnalysisStep461;
      TREE Fig._1_allo = [&R] (((Physalaemus_sp._A,Physalaemus_ephippifer),Physalaemus_enesefae),(((Physalaemus_pustulosus,(Physalaemus_petersi,Physalaemus_cf._freibergi)),Physalaemus_caicai),((Physalaemus_coloradorum,Physalaemus_sp._C),Physalaemus_pustulatus)));
[!  TreeBASE tree URI: http://purl.org/phylo/treebase/phylows/tree/TB2:Tr3344]


END;