@ARTICLE{TreeBASE2Ref17886,
author = {Dorothy E. Tuthill and Jens C. Frisvad},
title = {Eupenicillium bovifimosum, a new species from dry cow manure in Wyoming.},
year = {2001},
keywords = {dung fungi; ITS; LSU DNA; Penicillium; phylogeny; secondary metabolites; systematics; Trichocomaceae},
doi = {},
url = {http://www.mycologia.org/cgi/content/abstract/94/2/240},
pmid = {},
journal = {Mycologia},
volume = {94},
number = {2},
pages = {240--246},
abstract = {A new species, Eupenicillium bovifimosum, was isolated from dry cow manure collected in Wyoming, USA. The outstanding morphological characteristics of this species are its robust, dense penicilli bearing long, broad columns of conidia, and its smooth-walled, unflanged ascospores which are produced within 3 wk of inoculation onto MEA. The new species produces penicillic acid, a fumagillin-like molecule, patulodin-like compounds CK2108A and CK2108B, and a compound resembling 2-[(2-hydroxypropionyl)amino]benzamide. Phylogenetic analysis using 1100 bases of the ITS and LSU DNA regions indicates that E. bovifimosum is most closely related to E. baarnense, and also to E. crustaceum, E. egyptiacum, and E. tularense.}
}
Matrix 214 of Study 775
Yikes!
javax.el.ELException: Problems calling function [fn:length] at org.apache.el.parser.AstFunction.getValue(AstFunction.java:197) at org.apache.el.parser.AstGreaterThan.getValue(AstGreaterThan.java:36) at org.apache.el.ValueExpressionImpl.getValue(ValueExpressionImpl.java:189) at org.apache.jasper.runtime.PageContextImpl.proprietaryEvaluate(PageContextImpl.java:942) at org.apache.jsp.WEB_002dINF.pages.search.study.matrix_jsp._jspx_meth_c_005fif_005f2(matrix_jsp.java:851) at org.apache.jsp.WEB_002dINF.pages.search.study.matrix_jsp._jspx_meth_c_005fforEach_005f0(matrix_jsp.java:813) at org.apache.jsp.WEB_002dINF.pages.search.study.matrix_jsp._jspService(matrix_jsp.java:227) at org.apache.jasper.runtime.HttpJspBase.service(HttpJspBase.java:70) at javax.servlet.http.HttpServlet.service(HttpServlet.java:583) at org.apache.jasper.servlet.JspServletWrapper.service(JspServletWrapper.java:465) at org.apache.jasper.servlet.JspServlet.serviceJspFile(JspServlet.java:383) at org.apache.jasper.servlet.JspServlet.service(JspServlet.java:331) at javax.servlet.http.HttpServlet.service(HttpServlet.java:583) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:212) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:39) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.catalina.core.ApplicationDispatcher.invoke(ApplicationDispatcher.java:662) at org.apache.catalina.core.ApplicationDispatcher.processRequest(ApplicationDispatcher.java:428) at org.apache.catalina.core.ApplicationDispatcher.doForward(ApplicationDispatcher.java:360) at org.apache.catalina.core.ApplicationDispatcher.forward(ApplicationDispatcher.java:297) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at net.bull.javamelody.JspWrapper.invoke(JspWrapper.java:152) at net.bull.javamelody.JdbcWrapper$DelegatingInvocationHandler.invoke(JdbcWrapper.java:294) at com.sun.proxy.$Proxy159.forward(Unknown Source) at org.springframework.web.servlet.view.InternalResourceView.renderMergedOutputModel(InternalResourceView.java:142) at org.springframework.web.servlet.view.AbstractView.render(AbstractView.java:239) at org.springframework.web.servlet.DispatcherServlet.render(DispatcherServlet.java:1142) at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:879) at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:792) at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:476) at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:431) at javax.servlet.http.HttpServlet.service(HttpServlet.java:489) at javax.servlet.http.HttpServlet.service(HttpServlet.java:583) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:212) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:239) at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:215) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.tuckey.web.filters.urlrewrite.RuleChain.handleRewrite(RuleChain.java:164) at org.tuckey.web.filters.urlrewrite.RuleChain.doRules(RuleChain.java:141) at org.tuckey.web.filters.urlrewrite.UrlRewriter.processRequest(UrlRewriter.java:90) at org.tuckey.web.filters.urlrewrite.UrlRewriteFilter.doFilter(UrlRewriteFilter.java:406) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.displaytag.filter.ResponseOverrideFilter.doFilter(ResponseOverrideFilter.java:125) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:198) at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:75) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at com.opensymphony.module.sitemesh.filter.PageFilter.parsePage(PageFilter.java:119) at com.opensymphony.module.sitemesh.filter.PageFilter.doFilter(PageFilter.java:55) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:264) at org.acegisecurity.intercept.web.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:107) at org.acegisecurity.intercept.web.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:72) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.ui.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:110) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.wrapper.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:81) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.ui.AbstractProcessingFilter.doFilter(AbstractProcessingFilter.java:217) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.context.HttpSessionContextIntegrationFilter.doFilter(HttpSessionContextIntegrationFilter.java:191) at org.acegisecurity.util.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:274) at org.acegisecurity.util.FilterChainProxy.doFilter(FilterChainProxy.java:148) at org.acegisecurity.util.FilterToBeanProxy.doFilter(FilterToBeanProxy.java:90) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at net.bull.javamelody.MonitoringFilter.doFilter(MonitoringFilter.java:199) at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:181) at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:156) at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:168) at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90) at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:483) at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:130) at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93) at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:679) at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74) at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:346) at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:617) at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63) at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:934) at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1690) at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52) at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191) at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659) at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:63) at java.lang.Thread.run(Thread.java:750) Caused by: org.hibernate.SessionException: Session is closed! at org.hibernate.impl.AbstractSessionImpl.errorIfClosed(AbstractSessionImpl.java:49) at org.hibernate.impl.SessionImpl.getPersistenceContext(SessionImpl.java:1823) at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:232) at org.hibernate.loader.Loader.loadCollectionBatch(Loader.java:2032) at org.hibernate.loader.collection.BatchingCollectionInitializer.initialize(BatchingCollectionInitializer.java:47) at org.hibernate.persister.collection.AbstractCollectionPersister.initialize(AbstractCollectionPersister.java:565) at org.hibernate.event.def.DefaultInitializeCollectionEventListener.onInitializeCollection(DefaultInitializeCollectionEventListener.java:63) at org.hibernate.impl.SessionImpl.initializeCollection(SessionImpl.java:1716) at org.hibernate.collection.AbstractPersistentCollection.initialize(AbstractPersistentCollection.java:344) at org.hibernate.collection.AbstractPersistentCollection.read(AbstractPersistentCollection.java:86) at org.hibernate.collection.AbstractPersistentCollection.readSize(AbstractPersistentCollection.java:109) at org.hibernate.collection.PersistentSet.size(PersistentSet.java:139) at java.util.Collections$UnmodifiableCollection.size(Collections.java:1032) at org.apache.taglibs.standard.functions.Functions.length(Functions.java:193) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.lang.reflect.Method.invoke(Method.java:498) at org.apache.el.parser.AstFunction.getValue(AstFunction.java:186) ... 102 more