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Citation
Taxa
Matrices
Trees
Analyses
Matrix 46114 of Study
This study is part of submission
(Status: ).
Matrices
Title: Ceratocystis LAC clade ITS 57x549
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Ceratocystis adelpha CMW14809_KR476787_Theobroma_cacao_Ecuador | (none) | CCATGTGTGAACGTACCTATATATC---TT |
| Ceratocystis adelpha CMW15051_AY157951_Theobroma_cacao_Costa_Rica | (none) | CCATGTGTGAACGTACCTATATATC---TT |
| Ceratocystis cacaofunesta CMW14798_AY157952_Theobroma_cacao_Costa_Rica | (none) | CCATGTGTGAACGTACCCCTATATC---TT |
| Ceratocystis cacaofunesta CMW26375_AY157953_Theobroma_cacao_Brazil | (none) | CCATGTGTGAACGTACCCCTATATC---TT |
| Ceratocystis colombiana CMW5751_NR119483_Coffea_arabica_Colombia | (none) | CCATGTGTGAACATACCC---TATC---TT |
| Ceratocystis colombiana CMW5761_AY177234_Coffea_arabica_Colombia | (none) | CCATGTGTGAACATACCC---TATC---TT |
| Ceratocystis curvata CMW22435_FJ151437_Eucalyptus_deglupta_Ecuador | (none) | CCATGGGTGAACGTACC----TATT--TTT |
| Ceratocystis curvata CMW22442_NR137018_Eucalyptus_deglupta_Ecuador | (none) | CCATGGGTGAACGTACC----TATT--TTT |
| Ceratocystis diversiconidia CMW22445_FJ151440_Terminalia_ivorensis_Ecuador_ | (none) | CCATGTGTG-ACGTACC----TATC---TT |
| Ceratocystis diversiconidia CMW22448_FJ151441_Terminalia_ivorensis_Ecuador | (none) | CCATGTGTG-ACGTACC----TATC---TT |
| Ceratocystis ecuadoriana CMW22092_FJ151432_Eucalyptus_deglupta_Ecuador | (none) | CCATGTGTGAACGTACC----TGTC---TT |
| Ceratocystis ecuadoriana CMW22097_FJ151434_Eucalyptus_deglupta_Ecuador | (none) | CCATGTGTGAACGTACC----TGTC---TT |
| Ceratocystis eucalypticola CMW10000_FJ236722_Eucalyptus_spp_Kwazulu_Natal | (none) | CCATGTGTGAACGTACC----TATC--TTT |
| Ceratocystis eucalypticola CMW11536_FJ236723_Eucalyptus_spp_Kwazulu_Natal | (none) | CCATGTGTGAACATACC----TATC--TTT |
| Ceratocystis fimbriata CMW14799_KC493160_Ipomoea_batatas_North_Carolina | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis fimbriata CMW1547_AF264904_Ipomoea_batatas_Papua_New_Guinea | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis fimbriata CMW46734_KY809154_Ipomoea_batatas_Hawaii | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis fimbriatomima CMW24174_EF190963_Eucalyptus_hybrid_Venezuela | (none) | CCATGTGTGAACGTACC----TATC--TTT |
| Ceratocystis fimbriatomima CMW24377_EF190966_Eucalyptus_hybrid_Venezuela | (none) | CCATGTGTGAACGTACC----TATC--TTT |
| Ceratocystis lukuohia CMW44103_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW44105_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW44106_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW44107_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW46741_Metrosideros_polymorpha_Hawaii_TypeC | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW46743_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW46743_Metrosideros_polymorpha_Hawaii_TypeC | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW47139_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW47139_Metrosideros_polymorpha_Hawaii_TypeC | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW47152_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW47152_Metrosideros_polymorpha_Hawaii_TypeC | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW47857_KY809158_Metrosideros_polymorpha_Hawaii_TypeC | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis lukuohia CMW44102_KP203957_Metrosideros_polymorpha_Hawaii_TypeA | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis mangicola CMW14797_AY953382_Mangifera_indica_Brazil | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis mangicola CMW28907_FJ200257_Mangifera_indica_Brazil | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis manginecans CMW13851_NR119532_Mangifera_indica_Oman | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis manginecans CMW13852_AY953384_Mangifera_indica_Oman | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis mangivora CMW15052_EF433298_Mangifera_indica_Brazil | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis mangivora CMW27305_FJ200262_Mangifera_indica_Brazil | (none) | CCATGTGTGAACATACC----TATC--TTT |
| Ceratocystis neglecta CMW17808_NR137552_Eucalyptus_grandis_Colombia | (none) | CCATGTGTGAACGTACC----TGTC---TT |
| Ceratocystis neglecta CMW18194_EF127991_Eucalyptus_grandis_Colombia | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis papillata CMW10844_AY177238_Coffea_arabica_Colombia | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis papillata CMW8856_NR_119486_AY233867_Citrus_x_Tangelo_Colombia | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis species CMW14794_AY526298_Xanthosoma_C._esculenta_Cuba | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis species CMW14805_AY526297_Xanthosoma_sagittifolium_Costa_Rica | (none) | ?CATGTGTGAACATACC----TATC---TT |
| Ceratocystis species CMW48500_AY526294_Syngonium_spp_Hawaii | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis species CMW50456_Syngonium_spp_Hawaii | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis species CMW48508_AY526295_Syngonium_spp_Florida | (none) | CCATGTGTGAACATACC----TATC---TT |
| Ceratocystis platani CMW14802_DQ520630_Platanus_occidentalis_North_Carolina | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis platani CMW1896_AF395681_Platanus_spp_Switzerland | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis platani CMW2219_AF395679_Platanus_spp_France | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis platani CMW23450_KJ631107_Platanus_occidentalis_Greece | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis platani CMW9499_Platanus_spp_Italy | (none) | CCATGTGTGAACGTACC----TATC---TT |
| Ceratocystis cercfabiensis Eucalyptus_spp_China | (none) | CCATGTGTGAACGTAACC---TATC---TT |
| Ceratocystis cercfabiensis CMW43029_KP727592_KP727593_KP727594_Eucalyptus_species_China_Clone_K_ITS | (none) | ??ATGTGTGAACGTAACC---TATC---TT |
| Ceratocystis huliohia CMW46738_KY809156_Metrosideros_polymorpha_Hawaii | (none) | CCATGTGTGAACGTAAAC---TATC---TT |
| Ceratocystis huliohiae CMW47143_KY809155_Metrosideros_polymorpha_Hawaii | (none) | CCATGTGTGAACGTAAAC---TATC---TT |
| Ceratocystis albifundus CMW4068_DQ520638_Acacia_mearnsii_Kwazulu_Natal | (none) | CCATGTGTGAACATACCC---TGTCTTTTG |
Columns
None of the columns has a description.
