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Matrix 2620 of Study 2374
Citation title: "Phylogenetic reassessment of Mycosphaerella spp. and their anamorphs occurring on Eucalyptus. II".
This study was previously identified under the legacy study ID S1559
(Status: Published).
Matrices
Title: ITSalign1
Description: Legacy TreeBASE Matrix ID = M2801
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Botryosphaeria parva AY343467 | (none) | ---------------------GGATCATTA |
| Botryosphaeria obtusa AY343427 | (none) | ---------------------GGATCATTA |
| Mycosphaerella nubilosa AY725572 T | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella nubilosa AY725569 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AF449099 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725566 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725570 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725571 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725562 | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella juvenis AY725549 T | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella nubilosa CPC 11767 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa CPC 11487 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa CPC 11885 | (none) | -----------------GGAGGGATCATTA |
| Mycosphaerella nubilosa CPC 11246 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella juvenis AY725548 | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella nubilosa AY725564 | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella nubilosa CPC 11559 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725567 | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella nubilosa CPC 11249 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725568 | (none) | ---------------------GGATCATTA |
| Mycosphaerella nubilosa AY725565 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa CPC 11761 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella nubilosa AY725563 | (none) | --------------------GGGATCATTA |
| Mycosphaerella nubilosa CPC 11882 | (none) | -----------------GGAGGGATCATTA |
| Mycosphaerella nubilosa CPC 11723 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella | (none) | ------------------------------ |
| * | (none) | {AC}{CT}C-{CG}-{ACT}A-{AG}---A |
| nubilosa | (none) | {AC}{CT}C-{CG}-{ACT}A-{AG}---A |
| * | (none) | {AC}{CT}C-{CG}-{ACT}A-{AG}---A |
| AY725573 | (none) | C----T-G-----{CG}-{CG}-{CG}T-- |
| Mycosphaerella | (none) | ---CTTTCACCAAAGGTTGACCTCGGATCA |
| * | (none) | --GGG-ACC-GGTCTGGCGACGCGCCGTTA |
| nubilosa | (none) | --ACT-GTTTCGCT-TTC-----GGG-ACC |
| * | (none) | -CGT--CTCTAAGCGTTGTGGCACA--ACT |
| AY045509 | (none) | -------TGTCTCCGGCCGAGCCGAC-CGT |
| Mycosphaerella | (none) | --CTC-----CGCGCGCCTTAA-------T |
| * | (none) | -CTCCAGCCTCGCTGGGTATTGGGCGCCGC |
| nubilosa | (none) | -ACCA-CTCCAGCCTCGCTGGGTGTTGGGC |
| * | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| AY725574 | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTAGGC |
| Mycosphaerella | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTAGGC |
| * | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| nubilosa | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| AY045508 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis stellenboschiana AY725518 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense CPC 12059 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense CPC 11783 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense CPC 11780 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense AY244413 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense CPC 11965 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense AY244421 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis sp. CPC 11786 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis zuluense CPC 11962 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis ovatum | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| AY725515 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis ovatum | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| AY725517 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| Colletogloeopsis ovatum | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| AY725516 | (none) | -ACCA-CTCCGGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCAGCCTCGCTGGGCATTGGGC |
| Colletogloeopsis ovatum | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| AY725514 | (none) | -ACCA-CTCCAGCCTCGCTGGGCGTTGGGC |
| * | (none) | -ACCA-CTCCAGCCTCGCTGGGCGTTGGGC |
| Colletogloeopsis ovatum | (none) | -ACCA-CTCCAGCCTCGCTGGGTATTGGGC |
| * | (none) | -ACCC-CTCCAGCCTCGCTGGGTGTTGGGC |
| AY725513 | (none) | -ACCC-CTCCAGCCTCGCTGGGTGTTGGGC |
| Mycosphaerella molleriana AF449102 | (none) | -ACCC-CTCCAGCCTCGCTGGGTGTTGGGC |
| Mycosphaerella molleriana AY725559 | (none) | -CCCACCTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella molleriana CPC 11688 | (none) | -CCCACCTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella molleriana AF309620 T | (none) | -CCCACCTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella molleriana CPC 11187 | (none) | -CCCACCTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella molleriana CPC 11842 | (none) | -CCCACCTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella molleriana AY725561 | (none) | -CCCACCTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella molleriana AY725560 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella molleriana AF309619 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella molleriana CPC 11709 | (none) | -ACCA-CTCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella vespa CMW 11560 | (none) | -ACCC-CTCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella molleriana CPC 12056 | (none) | -ACCC-CTCAAGCCTCGCTTGGTGTTGGGC |
| Mycosphaerella vespa CMW 11563 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella vespa AY045499 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella molleriana CPC 11845 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella vespa CMW 11558 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella vespa CMW 11564 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella vespa AY045500 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella molleriana CPC 11685 | (none) | -ACCA-ATCAAGCCTGGCTTGGTATTGGGC |
| Mycosphaerella vespa CMW 11559 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella ambiphylla AY725530 T | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella ambiphylla AY725524 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella pluritubularis CPC 11697 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella pseudocryptica CPC 11267 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella pseudocryptica CPC 11264 | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella toledana AY725581 T | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella toledana AY725580 T | (none) | -ACCA-CTCAAGCCTCGCTTGGTATTGGGC |
| Mycosphaerella cryptica AF309622 | (none) | -ACCA-ATCAAGCCTCGCTTGGTATTGGGC |
Columns
None of the columns has a description.
