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Citation
Taxa
Matrices
Trees
Analyses
Matrix 3493 of Study 2374
Citation title: "Phylogenetic reassessment of Mycosphaerella spp. and their anamorphs occurring on Eucalyptus. II".
This study was previously identified under the legacy study ID S1559
(Status: Published).
Matrices
Title: ITSalign3
Description: Legacy TreeBASE Matrix ID = M2803
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Mycosphaerella fori AF468868 T | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella fori AF468869 T | (none) | TCCGTAGGTGAACCTGCGGAGGGATCATTA |
| Pseudocercospora eucalyptorum AF309598 T | (none) | ---------------------GGATCATTA |
| Pseudocercospora eucalyptorum AF309599 T | (none) | ---------------------GGATCATTA |
| Septoria eucalyptorum CPC 11282 | (none) | -------------------AGGGATCATTA |
| Septoria linicola AY152570 | (none) | -----------------------ATCATTA |
| Septoria protearum AY260081 | (none) | ------------------------------ |
| Cercospora acaciae-mangii AY752142 | (none) | ---------------------GGATCATTA |
| Cercospora beticola AY840527 T | (none) | ---------------------GGATCATTA |
| Cercospora apii AY840519 T | (none) | ---------------------GGATCATTA |
| Mycosphaerella quasicercospora CBS 111161 | (none) | -------------------AGGGATCATTA |
| Septoria scabiosicola AY152562 | (none) | -----------------------ATCATTA |
| Septoria epambrosiae AF279582 | (none) | --------------------GGGATCATTA |
| Septoria glycines AY826767 | (none) | ------GGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella ulmi AY152575 | (none) | -----------------------ATCATTA |
| Septoria provancialis CPC 12226 | (none) | ------GGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella berberidis AF362062 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella brassicicola AF297236 | (none) | -------------------AGGGATCATTA |
| Pseudocercosporella capsellae CPC 11677 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora sp. CPC 11592 | (none) | -------------------AGGGATCATTA |
| Stenella pseudoparkii CBS 110999 | (none) | -------------------AGGGATCATTA |
| Stenella pseudoparkii CBS 110988 | (none) | -------------------AGGGATCATTA |
| Stenella pseudoparkii CBS 110992 | (none) | -------------------AGGGATCATTA |
| Stenella pseudoparkii CBS 111049 | (none) | -------------------AGGGATCATTA |
| Stenella pseudoparkii CBS 111000 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella eucalyptorum CPC 11174 | (none) | -------------------AGGGATCATTA |
| Stenella xenoparkii CBS 111088 | (none) | -------------------AGGGATCATTA |
| Stenella xenoparkii CBS 111185 | (none) | -------------------AGGGATCATTA |
| Stenella xenoparkii CBS 111089 | (none) | -------------------AGGGATCATTA |
| Ramichloridium cerophilum AF050286 T | (none) | ---------------------GGATCATTA |
| Stenella sp. CPC 11671 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella verrucosiafricana CPC 11167 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella verrucosiafricana CPC 11170 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella verrucosiafricana CPC 11169 | (none) | ------GGTGAACCTGCGGAGGGATCATTA |
| Mycosphaerella sp. CPC 11004 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora sp. CBS 111373 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora luzardii AF362057 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella sphaerulinae AY293066 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora basitruncata CBS 114664 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora sp. CPC 11591 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora clematidis CPC 11657 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora sp. CPC 11726 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora vitis DQ289830 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora basiramifera AF309595 T | (none) | ---------------------GGATCATTA |
| Pseudocercospora paraguayensis AF309596 T | (none) | TCCGTAGGTGATCCTGCGGAGGGATCATTA |
| Pseudocercospora sp. CBS 111072 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora sp. CPC 11680 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora sp. CPC 11654 | (none) | -------------------AGGGATCATTA |
| Mycosphaerella sp. AY752154 | (none) | -------------------AGGGATCATTA |
| Pseudocercospora robusta CBS 111175 T | (none) | -------------------AGGGATCATTA |
| Pseudocercospora | (none) | --TCA-{CT}-T-{AG}T{AC}--A{CT}- |
| * | (none) | {AC}{CT}C-{CG}-{ACT}A-{AG}---A |
| eucalyptorum | (none) | -ATTGAAAGGTTGACCTCGGATCAGGTAGG |
| * | (none) | -GGGT-GGC--CGCGGCCGTTAAATCTTT- |
| AY725525 | (none) | --TA-AT-TCGCTTCG-----GAG-TGC-G |
| Mycosphaerella gracilis CBS 111189 | (none) | --CCGGCTGAGCCATT--CGTCTCTAAGCG |
| Mycosphaerella gracilis CPC 11144 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Mycosphaerella gracilis CPC 11181 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora pseudoeucalyptorum CPC 11713 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora pseudoeucalyptorum CPC 10916 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora pseudoeucalyptorum CBS 116359 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora pseudoeucalyptorum AY725526 T | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora pseudoeucalyptorum AY725527 | (none) | -GCGG---CTT-----CGCGCGCCTTAAAG |
| Pseudocercospora pseudoeucalyptorum AY725528 | (none) | -GCGG---CTT-----CGCGCGCCTTAAAG |
| Pseudocercospora platylobii AF488744 T | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora fatouae CPC 11648 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora sp. CPC 11668 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora sublata CPC 10849 | (none) | -GCGG---CTC-----CGCGCGCCTTAAAG |
| Pseudocercospora hibbertiae-asperae AF488743 T | (none) | -GCGG--TCTGC----CGCGCGCCTTAAAG |
| Pseudocercospora syzygiicola AF309600 T | (none) | -GCGG--CTTC-----CGCGCGTCTTAAAG |
| Pseudocercospora natalensis CBS 111069 | (none) | -GTCC--TCTCTGC-GGACGCGCCTTAAAG |
Columns
None of the columns has a description.
