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Matrix 4648 of Study 9960

About Citation title: "Is Persea (Lauraceae) monophyletic? Evidence from nuclear ribosomal ITS sequences".
About This study was previously identified under the legacy study ID S2296 (Status: Published).

Matrices

Title: ITS rDNA

Description: Legacy TreeBASE Matrix ID = M4361

Rows

Taxon Label Row Segments Characters 1?–30
Neolitsea sericea AF272296  (none) ACCACCAC-CGGCGAACCAAG---GTCC-C
Neolitsea sericea HBG  (none) ACCACCAC-CGGCGAACCAAG---GTCC-C
Nothaphoebe cavaleriei AY934900  (none) ------------------------------
Nothaphoebe cavaleriei LL20070260  (none) -------------GAACCA-----GTCCCA
Nothaphoebe umbelliflora  (none) ACAGCGAC-CGGCGAACCA-----GTCC-C
Ocotea foetens  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Ocotea helicterifolia  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Ocotea pulchella  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Parasassafras confertiflora AF272321  (none) ACCACCAC-CGGCGAACCAGA---GTCC-C
Parasassafras confertiflora AY265395  (none) ------------------------------
Persea alba  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea americana AF272322  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea americana HBG  (none) ACCACAAC-CGGCGAACCA-----GTCC-C
Persea areolatocostae J1227  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Persea areolatocostae W16459  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea borbonia  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea caerulea W17983  (none) ACAACCAC-CGGCGAACCA-----GTCC-C
Persea caerulea AF272323  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea indica  (none) ACCCCCAC-CGGCGAACCAGA---GTCC-C
Persea lingue AF272324  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea lingue Z20858  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea meridensis  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea mutisii  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea nudigemma  (none) ACCACGAC-CGGCGAACCAGTGAGGTCC-C
Persea aff subcordata  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea pajonalis  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea palustris M8380  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea palustris M9018  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea schiedeana  (none) ACCACGAC-CGGCGAACCAA----GTCC-C
Persea sphaerocarpa  (none) ACCACGAC-CGGCGAACCAGT-A-GTCC-C
Persea spec W14857  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea spec W19517  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Persea spec W21874  (none) ACCACGAC-CGGCGAACCAGT-A-GTCC-C
Persea spec V25232  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Persea steyermarkii  (none) ACCACAAC-CGGCGAACCA-----GTCC-C
Persea subcordata  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea venosa  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Persea veraguasensis  (none) GCCACCAC-CGGCGAACCA-----GTCC-C
Persea weberbaueri  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Persea willdenovii  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Phoebe excelsa  (none) ------------------------------
Phoebe formosana  (none) ACCACGAC-CGGCGAACCA-----GTCC-C
Phoebe forrestii  (none) ACCACAACCCCGCGAACCA-----GTCC-C
Phoebe lanceolata  (none) -----------------CA-----GTCC-C
Phoebe macrocarpa  (none) ACCACAAC-CCGCGAACCA-----GTCC-{
Phoebe megacalyx  (none) ACCACAAC-CCGCGAACCA-----GTCC-C
Phoebe neurantha  (none) -------------GAACCA-----GTCA-T
Phoebe puwenensis  (none) ACCACAAC-CCGCGAACCA-----GTCC-C
Phoebe sheareri HBG1  (none) ACCACGAC-CGGCGAACCA-----GTCC-C
Phoebe sheareri HBG2  (none) ACCACGAC-CGGCGAACCA-----GTCC-C
Rhodostemonodaphne crenaticupula  (none) ACCACCAC-CGGCGAACCA-----GTACGA
Sassafras albidum combined  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Sassafras tzumu combined  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Sextonia pubescens  (none) ACCACCAC-CGGCGAACCA-----GTCT-C
Umbellularia californica AF272337  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Umbellularia californica AY265393  (none) ------------------------------
Actinodaphne maingayi  (none) -----------GCGAACCAAG---GTCC-C
Actinodaphne sesquipedalis  (none) ACCACCAC-CGGCGAACCAAG---GTCC-C
Alseodaphne andersonii  (none) ------------------------------
Alseodaphne nigrescens SING27  (none) ACAGCGAC-CGGCGAACCA-----GTCC-C
Alseodaphne nigrescens SING29  (none) ACAGCGAC-CGGCGAACCA-----GTCC-C
Alseodaphne petiolaris  (none) ---------------ACCA-----GTCC-C
Alseodaphne semecarpifolia  (none) ACCACCAC-CGGCGAACCA-----GTCCAC
Alseodaphne spec W14264  (none) ACCACAAC-CGGCGAACCA-----GTCC-C
Alseodaphne spec W17084  (none) ACCACGAC-CGGCGAACCAA----GCCC-C
Alseodaphne spec A38  (none) ACAGCGAC-CGGCGAACCA-----GTCC-C
Anaueria brasiliensis  (none) ACCACCGC-CGGCGAACCC-----GTCC-C
Apollonias barbujana  (none) ---ACCAC-CGGCGAACCG-----GTCC-C
Chlorocardium rodiei  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Chlorocardium venenosum  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Cinnamomum amoenum  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Cinnamomum burmanii  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Cinnamomum daphnoides  (none) ACCACCAC-CGGCGAACCAA----GTCC-C
Cinnamomum duartianum  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Cinnamomum quadrangulum  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Dehaasia spec A34  (none) ACCACGAC-CGGCGAACCA-----GTCC-C
Dehaasia spec A37  (none) ACCACGAC-CGGCGAACCA-----GTCC-C
Dehaasia cuneata  (none) ------------------------------
Endlicheria gracilis  (none) ACCACCAC-CGGCGAACCA-----GTACGA
Laurus azorica  (none) ACCACCAC-CGGCGAACGA-----GTCC-C
Laurus nobilis AF272278  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Laurus nobilis HBG2006  (none) ACCACCAC-CGGCGAACGA-----GTCC-C
Licaria canella  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Lindera benzoin AF272283  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Lindera benzoin HBG  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Litsea accedens  (none) -----------GCGAACCA-A---GTCC-C
Litsea glutinosa  (none) ------------------------------
Machilus chienkweiensis  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus decursinervis  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus grijsii  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus japonica  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus minkweiensis  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus obovatifolia  (none) ------------------------------
Machilus oreophila  (none) ------------------------------
Machilus rimosa  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus shweliensis  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus spec W14068  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus spec W14071  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus thunbergii Y1352  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus thunbergii AF272327  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Machilus yunnanensis  (none) ---------------ACCACA---GTCC-C
Machilus zuihoensis  (none) ACCACCAC-CGGCGAACCACA---GTCC-C
Mezilaurus triunca  (none) ACCACCAC-CGGCGAACCA-----GTCC-C
Nectandra amazonum AF272289  (none) ACCACCAC-CGGCGAACCA-----GTCCCC
Nectandra amazonum HBG  (none) ACAACCAC-CGGCGAACCA-----GTCCCC
Neolitsea levinei  (none) ------------------------------

Columns

None of the columns has a description.