@ARTICLE{TreeBASE2Ref22384,
author = {Justin C. Bagley and Michael Sandel and Joseph Travis and Maria de Lourdes Lozano-Vilano and Jerald B. Johnson},
title = {Paleoclimatic modeling and phylogeography of least killifish, Heterandria formosa: insights into Pleistocene expansion-contraction dynamics and evolutionary history of North American Coastal Plain freshwater biota},
year = {2013},
keywords = {},
doi = {},
url = {http://},
pmid = {},
journal = {BMC Evolutionary Biology},
volume = {},
number = {},
pages = {},
abstract = {Background: Climatic and sea-level fluctuations throughout the last Pleistocene glacial cycle (~130-0 ka) profoundly influenced present-day distributions and genetic diversity of Northern Hemisphere biotas by forcing range contractions in many species during the glacial advance and allowing expansion following glacial retreat ('expansion-contraction' model). Evidence for such range dynamics and refugia in the unglaciated Gulf-Atlantic Coastal Plain stems largely from terrestrial species, and aquatic species Pleistocene responses remain relatively uninvestigated. Heterandria formosa, a wide-ranging regional endemic, presents an ideal system to test the expansion-contraction model within this biota. By integrating ecological niche modeling and phylogeography, we infer the Pleistocene history of this livebearing fish (Poeciliidae) and test for several predicted distributional and genetic effects of the last glaciation.
Results: Paleoclimatic models predicted range contraction to a single southwest Florida peninsula refugium during the Last Glacial Maximum, followed by northward expansion. We inferred spatial-population subdivision into four groups that reflect genetic barriers outside this refuge. Several other features of the genetic data were consistent with predictions derived from an expansion-contraction model: limited intraspecific divergence (e.g. mean mtDNA p-distance=0.66%); a pattern of mtDNA diversity (mean Hd=0.934; mean pi=0.007) consistent with rapid, recent population expansion; a lack of mtDNA isolation-by-distance; and clinal variation in allozyme diversity with higher diversity at lower latitudes near the predicted refugium. Statistical tests of mismatch distributions and coalescent simulations of the gene tree lent greater support to a scenario of post-glacial expansion and diversification from a single refugium than to any other model examined (e.g. multiple-refugia scenarios).
Conclusions: Congruent results from diverse data indicate H. formosa fits the classic Pleistocene expansion-contraction model, even as the genetic data suggest additional ecological influences on population structure. While evidence for Plio-Pleistocene Gulf Coast vicariance is well described for many freshwater species presently codistributed with H. formosa, this species demography and diversification departs notably from this pattern. Species-specific expansion-contraction dynamics may therefore have figured more prominently in shaping Coastal Plain evolutionary history than previously thought. Our findings bolster growing appreciation for the complexity of phylogeographical structuring within North America's southern refugia, including responses of Coastal Plain freshwater biota to Pleistocene climatic fluctuations. }
}
Taxa for matrix 18698 of Study 14718

Citation title:
"Paleoclimatic modeling and phylogeography of least killifish, Heterandria formosa: insights into Pleistocene expansion-contraction dynamics and evolutionary history of North American Coastal Plain freshwater biota".

Study name:
"Paleoclimatic modeling and phylogeography of least killifish, Heterandria formosa: insights into Pleistocene expansion-contraction dynamics and evolutionary history of North American Coastal Plain freshwater biota".

This study is part of submission 14718
(Status: Published).
Taxa
Return to matrix row view
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 1237510 |
Belonesox belizanus Bb53897Gua |
37292
|
2488542
|
| 1237537 |
Gambusia affinis Gaffinis |
33528
|
180573
|
| 1237516 |
Heterandria formosa HfBAC1SC |
55104
|
2493993
|
| 1237512 |
Heterandria formosa HfBAH1SC |
55104
|
2493993
|
| 1237548 |
Heterandria formosa HfBUG1FL |
55104
|
2493993
|
| 1237555 |
Heterandria formosa HfBUG2FL |
55104
|
2493993
|
| 1237522 |
Heterandria formosa HfCRO2SC |
55104
|
2493993
|
| 1237528 |
Heterandria formosa HfICH1FL |
55104
|
2493993
|
| 1237515 |
Heterandria formosa HfICH2FL |
55104
|
2493993
|
| 1237551 |
Heterandria formosa HfMCB12FL |
55104
|
2493993
|
| 1237549 |
Heterandria formosa HfOCH1FL |
55104
|
2493993
|
| 1237564 |
Heterandria formosa HfOCH2FL |
55104
|
2493993
|
| 1237557 |
Heterandria formosa HfPOR1LA |
55104
|
2493993
|
| 1237540 |
Heterandria formosa HfPOR2LA |
55104
|
2493993
|
| 1237541 |
Heterandria formosa HfRIS2FL |
55104
|
2493993
|
| 1237552 |
Heterandria formosa HfROB1FL |
55104
|
2493993
|
| 1237543 |
Heterandria formosa HfROB2FL |
55104
|
2493993
|
| 1237527 |
Heterandria formosa HfROB3FL |
55104
|
2493993
|
| 1237513 |
Heterandria formosa HfWAD1SC |
55104
|
2493993
|
| 1237545 |
Limia dominicensis Ldom |
154033
|
2495628
|
| 1237553 |
Limia melanogaster Lmela |
154034
|
2292555
|
| 1237518 |
Limia tridens Ltrid |
417468
|
175710
|
| 1237524 |
Limia vittata LvittCU153 |
154041
|
2292558
|
| 1237530 |
Limia vittata LvittCU197 |
154041
|
2292558
|
| 1237517 |
Pamphorichthys hollandi Pholl |
417478
|
134230
|
| 1237546 |
Poeciliidae sp HscfMEX1 |
|
|
| 1237532 |
Poeciliidae sp HscfMEX2 |
|
|
| 1237542 |
Pseudoxiphophorus anzuetoi Pa8226Gu65 |
|
|
| 1237523 |
Pseudoxiphophorus bimaculatus Pb53800M30 |
|
2535587
|
| 1237519 |
Pseudoxiphophorus bimaculatus Pb53820M43 |
|
2535587
|
| 1237563 |
Pseudoxiphophorus bimaculatus Pb53823M12 |
|
2535587
|
| 1237536 |
Pseudoxiphophorus bimaculatus Pb53825M74 |
|
2535587
|
| 1237531 |
Pseudoxiphophorus bimaculatus Pb53827M76 |
|
2535587
|
| 1237525 |
Pseudoxiphophorus bimaculatus Pb53831M79 |
|
2535587
|
| 1237538 |
Pseudoxiphophorus bimaculatus Pb53832M82 |
|
2535587
|
| 1237556 |
Pseudoxiphophorus bimaculatus Pb53843M73 |
|
2535587
|
| 1237534 |
Pseudoxiphophorus bimaculatus Pb53864G44 |
|
2535587
|
| 1237547 |
Pseudoxiphophorus bimaculatus Pb53882G49 |
|
2535587
|
| 1237514 |
Pseudoxiphophorus bimaculatus Pbi14205N4 |
|
2535587
|
| 1237520 |
Pseudoxiphophorus bimaculatus Pbi31147N2 |
|
2535587
|
| 1237562 |
Pseudoxiphophorus bimaculatus Pbi3688Ho6 |
|
2535587
|
| 1237539 |
Pseudoxiphophorus bimaculatus Pbi53861B9 |
|
2535587
|
| 1237526 |
Pseudoxiphophorus bimaculatus Pbi7825G50 |
|
2535587
|
| 1237550 |
Pseudoxiphophorus bimaculatus Pbi8086G10 |
|
2535587
|
| 1237535 |
Pseudoxiphophorus bimaculatus Pbi8444Ho7 |
|
2535587
|
| 1237561 |
Pseudoxiphophorus bimaculatus Pbi8529Ho8 |
|
2535587
|
| 1237560 |
Pseudoxiphophorus cataractae Pc53890G55 |
|
|
| 1237507 |
Pseudoxiphophorus cataractae Pc7804Gu54 |
|
|
| 1237508 |
Pseudoxiphophorus diremptus Pd53880G58 |
|
|
| 1237533 |
Pseudoxiphophorus diremptus Pd53881G58 |
|
|
| 1237511 |
Pseudoxiphophorus jonesii Pj43839M36 |
|
|
| 1237558 |
Pseudoxiphophorus jonesii Pj53793M25 |
|
|
| 1237529 |
Pseudoxiphophorus jonesii Pj53818M42 |
|
|
| 1237509 |
Pseudoxiphophorus jonesii Pj53835M32 |
|
|
| 1237559 |
Pseudoxiphophorus litoperas Pl53869G62 |
|
|
| 1237521 |
Pseudoxiphophorus obliquus Po53888G52 |
|
|
| 1237554 |
Pseudoxiphophorus obliquus Po53893G53 |
|
|
| 1237544 |
Xiphophorus helleri Xh53898Mex |
8084
|
2534848
|