Matrix 40555 of Study 20109
Matrices
Title: Diplodia phylogeny
Description: Combined tef1, ITS and tub2 sequence alignment
Rows
| Taxon Label | Row Segments | Characters 1?–30 |
|---|---|---|
| Diplodia africana CBS 120835 | (none) | AGGATTTTTCCCGCTCCCGCACGTGTGCAG |
| Diplodia agrifolia CBS_124.30 | (none) | AGGATTTCTCCTGCTCCCGCACGTGTGCAG |
| Diplodia agrifolia CBS 132777 | (none) | AGGATTTCTCCTGCTCCCGCACGTGTGCAG |
| Diplodia agrifolia CBS 132841 | (none) | AGGATTTCTCCTGCTCCCGCACGTGTGCAG |
| Diplodia allocellula CBS 130408 | (none) | AGGATTTTTTCCGCTCCCGCAC-TGTG--- |
| Diplodia citricarpa CBS 124715 | (none) | AGGTTTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia corticola CBS 110863 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112076 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112077 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112545 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS_112546 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112548 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112549 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112550 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112551 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 112552 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 149.46 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia corticola CBS 678.88 | (none) | CCGATTGTTCTCGCTCCTGCACGTGTGCGG |
| Diplodia cupressi CBS 168.87 | (none) | AGGCTTTTT-CCGCCCCTGCCCGTGTGCGG |
| Diplodia cupressi CBS 261.85 | (none) | AGGCTTTTT-CCGCCCCTGCCCGTGTGCGG |
| Diplodia gallae CBS 211.25 | (none) | CCGATTATTCCCACTCCTGCACGTGTGCGG |
| Diplodia gallae CBS 212.25 | (none) | CCGATTATTCCCACTCCTGCACGTGTGCGG |
| Diplodia gallae CBS 213.25 | (none) | CCGATTATTCCCACTCCTGCACGTGTGCGG |
| Diplodia intermedia CBS_124134 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia mutila CBS 112553 | (none) | AGGATTTTTCCCGCTCCCGCACGTGTGCAG |
| Diplodia olivarum CBS 121887 | (none) | AGGATTTTTCCCGCTCCCGCACGTGTGCAG |
| Diplodia pyri CBS 121862 | (none) | AGGATTTTCCCCGCTCCCGCACGTGTGCAG |
| Diplodia rosulata CBS 116470 | (none) | AGGATTTTCCCCGCTCCCGCACGTGTGCAG |
| Diplodia rosulata CBS 116472 | (none) | AGGATTTTCCCCGCTCCCGCACGTGTGCAG |
| Diplodia sapinea CBS 109725 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 109726 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 109727 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 110782 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 114864 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 117911 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 119938 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 120833 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 121105 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 166.38 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 189.37 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 393.84 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 520.50 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sapinea CBS 623.74 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia scrobiculata CBS_113297 | (none) | AGGATTTTTCCTGCTCCCGCAC-TGCG--- |
| Diplodia scrobiculata CBS_118110 | (none) | AGGATTTTCCCTGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 100059 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 103.68 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110486 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110488 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110491 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110493 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110494 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110849 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110853 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110857 | (none) | AGGATTTTTCCTGCTCCCGCAC-CGCG--- |
| Diplodia seriata CBS 110858 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110861 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110869 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110872 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110873 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110874 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 110875 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 112555 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 112978 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 113503 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 113507 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 113508 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 113527 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 114791 | (none) | AGGATTTTTCCTGCTCCCGCAC-CGCG--- |
| Diplodia seriata CBS 117.82 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS_118.82 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 119131 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 127.34 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 134.50 | (none) | AGGATTTTTCCTGCTCCCGCAC-CGCG--- |
| Diplodia seriata CBS 151.24 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 177.26 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 200.49 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 209.25 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 214.25 | (none) | AGGATTTTTCCTGCTCCCGCAC-CGCG--- |
| Diplodia seriata CBS 216.25 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 254.38 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia seriata CBS 358.68 | (none) | AGGATTTTTCCTGCTCCCGCAC-CGCG--- |
| Diplodia seriata CBS 469.69 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sp. 1 CBS 139667 | (none) | AGGATTTTTCCCGCTCCCGCAC-TGCG--- |
| Diplodia sp. 2 CBS 533.87 | (none) | CCGATTATTCCCACTCCTGCACGTGTGCGG |
| Diplodia sp. 3 CBS 125.37 | (none) | AGGATTTTTCCCGCTCCCGCACGTGTGCAG |
| Diplodia sp. 4 CBS 230.30 | (none) | AGGATTTTTCCCGCTCCCGCACGTGTGCAG |
| Diplodia tsugae CBS 418.64 | (none) | AGGACTTTTGCCGCCCCTGCACGCGGGCG- |
| Lasiodiplodia gonubiensis CBS 115812 | (none) | TCAGTACTC-AAATTTTGCCCG---GCCAG |
| Lasiodiplodia theobromae CBS_164.96 | (none) | TAACCCCTCTCGACTTCGGCGC---TGCAG |
Columns
None of the columns has a description.