@ARTICLE{TreeBASE2Ref20188,
author = {Ester Gaya and Pere Navarro-Rosines and Xavier Llimona and Nestor Hladun and Francois Lutzoni},
title = {Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes)},
year = {2008},
keywords = {arc, Caloplaca, Fulgensia, INAASE, internal transcribed spacer, Letrouitiaceae, molecular phylogenetics, Teloschistaceae, Teloschistes, Xanthoria},
doi = {},
url = {http://},
pmid = {},
journal = {Mycological Research},
volume = {112},
number = {5},
pages = {528--547},
abstract = {Teloschistaceae (Lecanoromycetes, lichen-forming Ascomycota) is a widespread family with considerable morphological and ecological heterogeneity across genera and species groups. In order to provide a comprehensive molecular phylogeny for this family, phylogenetic analyses were carried out on sequences from the nuclear ribosomal internal transcribed spacer (ITS) region obtained from 114 individuals that represent virtually all main lineages of Teloschistaceae. Our study confirmed the polyphyly of Caloplaca, Fulgensia and Xanthoria, and also revealed that Teloschistes is probably non-monophyletic. We also confirm here that species traditionally included in Caloplaca subgenus Gasparrinia do not form a monophyletic entity. Caloplaca aurantia, C. carphinea and C. saxicola s. str. groups were recovered as monophyletic. Subgenera Caloplaca and Pyrenodesmia were also polyphyletic. In subgenus Caloplaca, the traditionally recognized C. cerina group was recovered as monophyletic. The genus Letrouitia (Letrouitiaceae) was nested within the Teloschistaceae. Because this study is based solely on ITS, to maximize taxon sampling, the inclusion of phylogenetic signal from ambiguously aligned regions in maximum parsimony (recoded INAASE and ARC characters) resulted in the most highly supported phylogenetic reconstruction, compared to Bayesian inference restricted to alignable sites.}
}
Citation for Study 12085
Citation title:
"Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes)".
Study name:
"Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes)".
This study is part of submission 12085
(Status: Published).
Citation
Gaya E., Navarro-rosines P., Llimona X., Hladun N., & Lutzoni F. 2008. Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes). Mycological Research, 112(5): 528-547.
Authors
-
Gaya E.
(submitter)
+44 0208 332 5381
-
Navarro-rosines P.
-
Llimona X.
-
Hladun N.
-
Lutzoni F.
Abstract
Teloschistaceae (Lecanoromycetes, lichen-forming Ascomycota) is a widespread family with considerable morphological and ecological heterogeneity across genera and species groups. In order to provide a comprehensive molecular phylogeny for this family, phylogenetic analyses were carried out on sequences from the nuclear ribosomal internal transcribed spacer (ITS) region obtained from 114 individuals that represent virtually all main lineages of Teloschistaceae. Our study confirmed the polyphyly of Caloplaca, Fulgensia and Xanthoria, and also revealed that Teloschistes is probably non-monophyletic. We also confirm here that species traditionally included in Caloplaca subgenus Gasparrinia do not form a monophyletic entity. Caloplaca aurantia, C. carphinea and C. saxicola s. str. groups were recovered as monophyletic. Subgenera Caloplaca and Pyrenodesmia were also polyphyletic. In subgenus Caloplaca, the traditionally recognized C. cerina group was recovered as monophyletic. The genus Letrouitia (Letrouitiaceae) was nested within the Teloschistaceae. Because this study is based solely on ITS, to maximize taxon sampling, the inclusion of phylogenetic signal from ambiguously aligned regions in maximum parsimony (recoded INAASE and ARC characters) resulted in the most highly supported phylogenetic reconstruction, compared to Bayesian inference restricted to alignable sites.
Keywords
arc, Caloplaca, Fulgensia, INAASE, internal transcribed spacer, Letrouitiaceae, molecular phylogenetics, Teloschistaceae, Teloschistes, Xanthoria
External links
About this resource
- Canonical resource URI:
http://purl.org/phylo/treebase/phylows/study/TB2:S12085
- Other versions:
Nexus
NeXML
- Show BibTeX reference
@ARTICLE{TreeBASE2Ref20188,
author = {Ester Gaya and Pere Navarro-Rosines and Xavier Llimona and Nestor Hladun and Francois Lutzoni},
title = {Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes)},
year = {2008},
keywords = {arc, Caloplaca, Fulgensia, INAASE, internal transcribed spacer, Letrouitiaceae, molecular phylogenetics, Teloschistaceae, Teloschistes, Xanthoria},
doi = {},
url = {http://},
pmid = {},
journal = {Mycological Research},
volume = {112},
number = {5},
pages = {528--547},
abstract = {Teloschistaceae (Lecanoromycetes, lichen-forming Ascomycota) is a widespread family with considerable morphological and ecological heterogeneity across genera and species groups. In order to provide a comprehensive molecular phylogeny for this family, phylogenetic analyses were carried out on sequences from the nuclear ribosomal internal transcribed spacer (ITS) region obtained from 114 individuals that represent virtually all main lineages of Teloschistaceae. Our study confirmed the polyphyly of Caloplaca, Fulgensia and Xanthoria, and also revealed that Teloschistes is probably non-monophyletic. We also confirm here that species traditionally included in Caloplaca subgenus Gasparrinia do not form a monophyletic entity. Caloplaca aurantia, C. carphinea and C. saxicola s. str. groups were recovered as monophyletic. Subgenera Caloplaca and Pyrenodesmia were also polyphyletic. In subgenus Caloplaca, the traditionally recognized C. cerina group was recovered as monophyletic. The genus Letrouitia (Letrouitiaceae) was nested within the Teloschistaceae. Because this study is based solely on ITS, to maximize taxon sampling, the inclusion of phylogenetic signal from ambiguously aligned regions in maximum parsimony (recoded INAASE and ARC characters) resulted in the most highly supported phylogenetic reconstruction, compared to Bayesian inference restricted to alignable sites.}
}
- Show RIS reference
TY - JOUR
ID - 20188
AU - Gaya,Ester
AU - Navarro-Rosines,Pere
AU - Llimona,Xavier
AU - Hladun,Nestor
AU - Lutzoni,Francois
T1 - Phylogenetic reassessment of the Teloschistaceae (lichen-forming Ascomycota, Lecanoromycetes)
PY - 2008
KW - arc
KW - Caloplaca
KW - Fulgensia
KW - INAASE
KW - internal transcribed spacer
KW - Letrouitiaceae
KW - molecular phylogenetics
KW - Teloschistaceae
KW - Teloschistes
KW - Xanthoria
UR - http://dx.doi.org/
N2 - Teloschistaceae (Lecanoromycetes, lichen-forming Ascomycota) is a widespread family with considerable morphological and ecological heterogeneity across genera and species groups. In order to provide a comprehensive molecular phylogeny for this family, phylogenetic analyses were carried out on sequences from the nuclear ribosomal internal transcribed spacer (ITS) region obtained from 114 individuals that represent virtually all main lineages of Teloschistaceae. Our study confirmed the polyphyly of Caloplaca, Fulgensia and Xanthoria, and also revealed that Teloschistes is probably non-monophyletic. We also confirm here that species traditionally included in Caloplaca subgenus Gasparrinia do not form a monophyletic entity. Caloplaca aurantia, C. carphinea and C. saxicola s. str. groups were recovered as monophyletic. Subgenera Caloplaca and Pyrenodesmia were also polyphyletic. In subgenus Caloplaca, the traditionally recognized C. cerina group was recovered as monophyletic. The genus Letrouitia (Letrouitiaceae) was nested within the Teloschistaceae. Because this study is based solely on ITS, to maximize taxon sampling, the inclusion of phylogenetic signal from ambiguously aligned regions in maximum parsimony (recoded INAASE and ARC characters) resulted in the most highly supported phylogenetic reconstruction, compared to Bayesian inference restricted to alignable sites.
L3 -
JF - Mycological Research
VL - 112
IS - 5
SP - 528
EP - 547
ER -
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