@ARTICLE{TreeBASE2Ref26509,
author = {Pieter De Maayer and Don A Cowan},
title = {Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus},
year = {2016},
keywords = {Geobacillus; flagellin; post-translational modification; glycosylation; glycosyltransferase; pseudaminic acid},
doi = {},
url = {http://},
pmid = {},
journal = {BMC Genomics},
volume = {},
number = {},
pages = {},
abstract = {Background: Protein glycosylation involves the post-translational attachment of sugar chains to target proteins and has been observed in all three domains of life. Post-translational glycosylation of flagellin, the main structural protein of the flagellum, is a common characteristic among many Gram-negative bacteria and Archaea. Several distinct functions have been ascribed to flagellin glycosylation, including stabilisation and maintenance of the flagellar filament, motility, surface recognition, adhesion, and virulence. However, little is known about this trait among Gram-positive bacteria.
Results: Using comparative genomic approaches the flagellin glycosylation loci of multiple strains of the Gram-positive thermophilic genus Geobacillus were identified and characterized. Eighteen of thirty-six compared strains of the genus carry these loci, which show evidence of horizontal acquisition. The Geobacillus flagellin glycosylation islands (FGIs) can be clustered into five distinct types, which are predicted to encode highly variable glycans decorated with distinct and heavily modified sugars.
Conclusions: Our comparative genomic analyses showed that, while not universal, flagellin glycosylation islands are relatively common among members of the genus Geobacillus and that the encoded flagellin glycans are highly variable. This suggests that flagellin glycosylation plays an important role in the lifestyles of members of this thermophilic genus.
}
}
Taxa for Study 20124

Citation title:
"Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus".

Study name:
"Comparative genomic analysis of the flagellin glycosylation island of the Gram-positive thermophile Geobacillus".

This study is part of submission 20124
(Status: Published).
Taxa
| ID |
Taxon Label |
NCBI taxid |
uBIO namebankID |
| 2532950 |
Bacillus subtilis 168 |
1423
|
229777
|
| 2533005 |
Bacillus thuringiensis ATCC 35646 |
|
|
| 2533008 |
Campylobacter jejuni 81-176 |
197
|
229785
|
| 2532941 |
Geobacillus caldoxylosilyticus CIC9 |
81408
|
2555902
|
| 2532981 |
Geobacillus caldoxylosilyticus DSM12041T |
81408
|
2555902
|
| 2533030 |
Geobacillus kaustophilus DSM 7263T |
|
|
| 2532978 |
Geobacillus kaustophilus DSM7263T |
1462
|
2555903
|
| 2532993 |
Geobacillus kaustophilus DSM7263Tb |
1462
|
2555903
|
| 2532954 |
Geobacillus kaustophilus GBlys |
|
|
| 2532947 |
Geobacillus kaustophilus HTA426 |
1462
|
2555903
|
| 2532988 |
Geobacillus kaustophilus HTA426b |
1462
|
2555903
|
| 2532942 |
Geobacillus lituanicus DSM15325T |
169283
|
3520104
|
| 2532992 |
Geobacillus sp 10 |
|
|
| 2532987 |
Geobacillus sp C56T2 |
|
|
| 2533000 |
Geobacillus sp CAMR12739 |
|
|
| 2532991 |
Geobacillus sp Et74 |
|
|
| 2533001 |
Geobacillus sp GHH01 |
|
|
| 2532999 |
Geobacillus sp MAS1 |
|
|
| 2532994 |
Geobacillus sp PSS1 |
|
|
| 2532998 |
Geobacillus sp PSS2 |
|
|
| 2533003 |
Geobacillus sp WSUCF1 |
|
|
| 2533002 |
Geobacillus sp Y412MC52 |
|
|
| 2533004 |
Geobacillus sp Y412MC61 |
|
|
| 2532943 |
Geobacillus sp. 10 |
|
|
| 2532955 |
Geobacillus sp. A8 |
|
|
| 2532969 |
Geobacillus sp. B23 |
|
|
| 2533007 |
Geobacillus sp. C56-T2 |
|
|
| 2532951 |
Geobacillus sp. C56T2 |
|
|
| 2532975 |
Geobacillus sp. C56T3 |
|
|
| 2532979 |
Geobacillus sp. CAMR12739 |
|
|
| 2532965 |
Geobacillus sp. CAMR5420 |
|
|
| 2532964 |
Geobacillus sp. CCBUS3UF5 |
|
|
| 2533029 |
Geobacillus sp. Et7/4 |
|
|
| 2532963 |
Geobacillus sp. Et74 |
|
|
| 2532960 |
Geobacillus sp. FW23 |
|
|
| 2532970 |
Geobacillus sp. GHH01 |
|
|
| 2532967 |
Geobacillus sp. JF8 |
|
|
| 2532944 |
Geobacillus sp. MAS1 |
|
|
| 2532948 |
Geobacillus sp. NUB3621 |
|
|
| 2532980 |
Geobacillus sp. PSS1 |
|
|
| 2532945 |
Geobacillus sp. PSS2 |
|
|
| 2532971 |
Geobacillus sp. WSUCF1 |
|
|
| 2532968 |
Geobacillus sp. Y412MC52 |
|
|
| 2532956 |
Geobacillus sp. Y412MC61 |
|
|
| 2532983 |
Geobacillus stearothermophilus 22 |
1422
|
2555904
|
| 2532952 |
Geobacillus stearothermophilus 53 |
1422
|
2555904
|
| 2532962 |
Geobacillus stearothermophilus ATCC12980T |
1422
|
2555904
|
| 2532974 |
Geobacillus stearothermophilus ATCC7953 |
1422
|
2555904
|
| 2532961 |
Geobacillus subterraneus DSM13552T |
129338
|
2555905
|
| 2532976 |
Geobacillus thermantarcticus D1T |
657269
|
|
| 2532984 |
Geobacillus thermocatenulatus DSM730T |
33938
|
2555906
|
| 2533009 |
Geobacillus thermocatenulatus GS-1 |
33938
|
2555906
|
| 2532966 |
Geobacillus thermocatenulatus GS1 |
33938
|
2555906
|
| 2532990 |
Geobacillus thermocatenulatus GS1b |
33938
|
2555906
|
| 2532946 |
Geobacillus thermodenitrificans DSM465T |
33940
|
2555907
|
| 2532953 |
Geobacillus thermodenitrificans G11MC16 |
33940
|
2555907
|
| 2532985 |
Geobacillus thermodenitrificans NG802 |
33940
|
2555907
|
| 2533032 |
Geobacillus thermoglucosidans C56-YS93 |
|
|
| 2532973 |
Geobacillus thermoglucosidans C56YS93 |
|
|
| 2532995 |
Geobacillus thermoglucosidans C56YS93b |
|
|
| 2533031 |
Geobacillus thermoglucosidans DSM 2542T |
|
|
| 2532972 |
Geobacillus thermoglucosidans DSM2542T |
|
|
| 2532997 |
Geobacillus thermoglucosidans DSM2542Tb |
|
|
| 2533010 |
Geobacillus thermoglucosidans TNO09.20 |
|
|
| 2532957 |
Geobacillus thermoglucosidans TNO0920 |
|
|
| 2532989 |
Geobacillus thermoglucosidans TNO0920b |
|
|
| 2533006 |
Geobacillus thermoglucosidans Y4.1MC1 |
|
|
| 2532959 |
Geobacillus thermoglucosidans Y41MC1 |
|
|
| 2532996 |
Geobacillus thermoglucosidans Y41MC1b |
|
|
| 2532958 |
Geobacillus thermoleovorans DSM5366T |
33941
|
2555909
|
| 2532949 |
Geobacillus toebii DSM14590T |
153151
|
3017407
|
| 2532982 |
Geobacillus toebii WCH70 |
153151
|
3017407
|
| 2532977 |
Geobacillus uzenensis XT |
|
|
| 2532986 |
Geobacillus vulcani DSM13174T |
135517
|
3520576
|